BAC Information

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BAC

Clone NameB6Ng01-262G13
Chromosome13 (Build37)
Map Location 95,560,014 - 95,561,195
singlet/doubletsinglet
Overlap geneTbca
Upstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
Downstream geneOtp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262G13.bB6Ng01-262G13.g
ACCGA066831GA066832
length1,1791,040
definitionB6Ng01-262G13.b B6Ng01-262G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttttggaagaaatacctgctacatttttgatacagtgtgat
tcaaataaataagatacaccatataggttttgctcagtacatgtttatga
gtgcagttttcagaatgtggctgaagtcacacttcaggttagtagcagag
caagcaaatgaaacaaggatcctggctccagctgggatgcggtgatagag
cattagactgtgtgataacacaggaggggaatatgagatctatagcatac
agtaagtaatccgcgctgtccctcagcccacacgtttcttctcttttgcc
agactttccttggctgtgtcatttcctttagcatattgtctattttgcag
aaaagaacccggaggtataagagactgctttaaagtaaatatcatgagaa
aacatttctaaatgttttcccattaatatgttgttgattttatcaccctc
ttgatctattctataaatttatttagttcaagtagttatagcctaaccat
acatatgctagagaaacgtcctttaagtaattaagaactagcttgtgaga
cattgacaaattctcagatgcctacataaactgcacagaagtagataaag
ttttctgggtagattaataggacattatcaaagtttacttttggtattca
tatttcaataagttaataattttcatgaaactcataatttaccataatct
caagttgcttattaaatgaatgtgtatcatacgcatcttccctggccctt
tgttgacatgaggtgtagcatttcttcttgcatactgtaaaacagggaca
tacacttttaaacttaaaatttgtatttcacttgttgattacctgcattt
tatcttgctgtataatatctacatccataaacattacttctttatttttt
cctgaaaacttattttactgtgattgtcttctgtgttaatagactaaggc
ggaattctacattttatctcatccaaaggggagcataaatgaggcagaca
ttaattgttggggaagaatgatcttgggcccaagaagcttaaagggcgtt
gctgctttttctttctccagatttagttccaagacttcttagtttcatga
ttcaggatgttcctgggtttatgaaggattctttctgcctcattgggttg
ttgtatttataaacttgccattatttatt
gaattcactggcacaggaaaagactttctgaatagaacactgttaagcca
gtctctaagatcaacttaataaatgtgactttacaaacctgaaaaggttc
tgtatgacaaagaatagcatcagttggacaaagcagcagcctacagaatg
ggaaaggagttttaccaacctcacatctggtaaagagctaatatccaaag
tataaagataactcaaacacctacatatcaagaaaacaaataacccaatt
taaaaaataaaaatggggtacagacctaaacagaattctcagtataggaa
acacaactatttggctgagagattaaaattttttcatcatccttagccat
caagaaaatgcaaatcaaagctactttgagatttcattttacacccatca
gaatggctaagatcaaacgaacaactgatgggtcatgctggtgaggatgt
ggaataagggaacactccctcatctgctgatgggagtgaaaacttgtaca
gccactatgaaaatcagtgtggtgactcctcagtaaaatgggaatcaatc
tacctcaggacccagctatgcacattcttaggcatataccatttgttcaa
ccatgttcactgctttgtatacaaaatagccagaaatttgagacaaccta
gatgtctctcaacagaaaaatggatagagaaatatggtacatttatacaa
tgaagcattactcagctgattaaagcaatgacatcatgctaacttgcagg
taaatagatagaactagaaaaaaaaatcatcctgagtgaggtaacccaga
ccccaaaagataaatatggtacatatttgcttatatgtaggtattaacta
ttaatttaaatgataaccaagccacatccatagaaccagagagttaaaca
taaaggaaagggattttgggggagatacatggatatccctgggatgggaa
aatagaatagattttatgggtggacttgaggtggtttggaacagaacagg
aagatcatgtgggaagggggaaaagaaaatgggggttaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95560014_95561195
seq2: B6Ng01-262G13.b_45_1223

seq1  GAATTCAGTTTTTGGAAGAAATACCTGCTACATTTTTGATACAGTGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTTGGAAGAAATACCTGCTACATTTTTGATACAGTGTGAT  50

seq1  TCAAATAAATAAGATACACCATATAGGTTTTGCTCAGTACATGTTTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAATAAGATACACCATATAGGTTTTGCTCAGTACATGTTTATGA  100

seq1  GTGCAGTTTTCAGAATGTGGCTGAAGTCACACTTCAGGTTAGTAGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTTTTCAGAATGTGGCTGAAGTCACACTTCAGGTTAGTAGCAGAG  150

seq1  CAAGCAAATGAAACAAGGATCCTGGCTCCAGCTGGGATGCGGTGATAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAATGAAACAAGGATCCTGGCTCCAGCTGGGATGCGGTGATAGAG  200

seq1  CATTAGACTGTGTGATAACACAGGAGGGGAATATGAGATCTATAGCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGACTGTGTGATAACACAGGAGGGGAATATGAGATCTATAGCATAC  250

seq1  AGTAAGTAATCCGCGCTGTCCCTCAGCCCACACGTTTCTTCTCTTTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTAATCCGCGCTGTCCCTCAGCCCACACGTTTCTTCTCTTTTGCC  300

seq1  AGACTTTCCTTGGCTGTGTCATTTCCTTTAGCATATTGTCTATTTTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCCTTGGCTGTGTCATTTCCTTTAGCATATTGTCTATTTTGCAG  350

seq1  AAAAGAACCCGGAGGTATAAGAGACTGCTTTAAAGTAAATATCATGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACCCGGAGGTATAAGAGACTGCTTTAAAGTAAATATCATGAGAA  400

seq1  AACATTTCTAAATGTTTTCCCATTAATATGTTGTTGATTTTATCACCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTCTAAATGTTTTCCCATTAATATGTTGTTGATTTTATCACCCTC  450

seq1  TTGATCTATTCTATAAATTTATTTAGTTCAAGTAGTTATAGCCTAACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTATTCTATAAATTTATTTAGTTCAAGTAGTTATAGCCTAACCAT  500

seq1  ACATATGCTAGAGAAACGTCCTTTAAGTAATTAAGAACTAGCTTGTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCTAGAGAAACGTCCTTTAAGTAATTAAGAACTAGCTTGTGAGA  550

seq1  CATTGACAAATTCTCAGATGCCTACATAAACTGCACAGAAGTAGATAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGACAAATTCTCAGATGCCTACATAAACTGCACAGAAGTAGATAAAG  600

seq1  TTTTCTGGGTAGATTAATAGGACATTATCAAAGTTTACTTTTGGTATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGGTAGATTAATAGGACATTATCAAAGTTTACTTTTGGTATTCA  650

seq1  TATTTCAATAAGTTAATAATTTTCATGAAACTCATAATTTACCATAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAATAAGTTAATAATTTTCATGAAACTCATAATTTACCATAATCT  700

seq1  CAAGTTGCTTATTAAATGAATGTGTATCATACGCATCTTCCCTGGCCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGCTTATTAAATGAATGTGTATCATACGCATCTTCCCTGGCCCTT  750

seq1  TGTTGACATGAGGTGTAGCATTTCTTCTTGCATACTGTAAAACAGGGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACATGAGGTGTAGCATTTCTTCTTGCATACTGTAAAACAGGGACA  800

seq1  TACACTTTTAAACTTAAAATTTGTATTTCACTTGTTGATTACCTGCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTTAAACTTAAAATTTGTATTTCACTTGTTGATTACCTGCATTT  850

seq1  TATCTTGCTGTATAATATCTACATCCATAAACATTACTTCTTTATTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGCTGTATAATATCTACATCCATAAACATTACTTCTTTATTTTTT  900

seq1  CCTGAAAACTTATTTTACTGTGATTGTCTTCTGTGTTAATAGACTAAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAACTTATTTTACTGTGATTGTCTTCTGTGTTAATAGACTAAGGC  950

seq1  GGAATTCTACATTTTATCTCATCCAAAGGGGAGCATAAATGAGGCAGACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTACATTTTATCTCATCCAAAGGGGAGCATAAATGAGGCAGACA  1000

seq1  TTAATTGTTGGGGAAGAATGATCTTGGGCCCAAG-AGCTTAAAGGGCG-T  1048
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  TTAATTGTTGGGGAAGAATGATCTTGGGCCCAAGAAGCTTAAAGGGCGTT  1050

seq1  GCTGC-TTTTCCTTCTCCAGATTTAGTTCCAAAGACTTCTTAGTTTCATG  1097
      ||||| ||||| |||||||||||||||||| |||||||||||||||||||
seq2  GCTGCTTTTTCTTTCTCCAGATTTAGTTCC-AAGACTTCTTAGTTTCATG  1099

seq1  ATTCAAGAATGTTCTTGGTTTTATGAAAGGGATTCTTTCTG-CTCATTGG  1146
      |||| || |||||| ||| ||||||||  |||||||||||| ||||||||
seq2  ATTC-AGGATGTTCCTGGGTTTATGAA--GGATTCTTTCTGCCTCATTGG  1146

seq1  GTTTGTTGTATTTTATAAAACTTGCATTTATTTATT  1182
      | |||||||| ||||| ||||||||  |||||||||
seq2  G-TTGTTGTA-TTTAT-AAACTTGCCATTATTTATT  1179