BAC Information

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BAC

Clone NameB6Ng01-263L03
Chromosome13 (Build37)
Map Location 81,790,000 - 81,921,149
singlet/doubletdoublet
Overlap geneLysmd3, Polr3g, 2900024O10Rik
Upstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
Downstream geneCetn3, LOC238756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263L03.bB6Ng01-263L03.g
ACCGA067796GA067797
length931,082
definitionB6Ng01-263L03.b B6Ng01-263L03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,790,000 - 81,790,092)(81,920,059 - 81,921,149)
sequence
gaattctcgccatattcacctccaaacactgtcctattctcttgggaaaa
aaataagaataaggaggaggagaagggggaggaggaggaagga
gaattctttacattgtgaattgcaggccagccaggactagtagtagaccc
tgcctaaaatataaaaattaagtacttttactaacaagtttaaaaggaaa
ttaggccaagcagtggtggctcacgcctttaatctcagcacttgggaggc
agaggcaggtgaatttctgagttcgaggccagcctggtctacagagtgag
ttccagggcagccagggctacacagagaaaccttgtctcgaaaaaacaaa
caaacaaacaaaaaaaggaaattagattacgtcatatgtatactaaagaa
cactagtgaaaaaaaaaactactaaaattttaagattgtaaaaccaagcc
taagaagaaaagtattaaataaaggtgaaaataaaccatttacatggaga
tgtttgaaacaaaggacaaaataaactaaactagaaggaataaattactg
agaaataatataatgagattttttttaatggaactttgatagaattaaaa
agctggtaaaatattctcatttaatatgaagaattttcttgaaacacata
aatttcacattcttctaggaagtgaaataaagaagaaattattacttaat
actttaaaagaaagttttgcttaaaagtatttctcatacaagcctgatga
gggaagttgtattctcctgccttgcaaccccactggaaacccattgtgaa
aagagagaaccaacctcaaacaatggtcttctgacaccacacgcgtgcca
tggctgtggcccacatgcacacacacaataattattataaatttgatgct
tctaatacatagttaaatttaaattatttcaaagaaaataaaagtaacta
aaagtgaccaaaagttgggagaactggatttggtcaatatagacaaaagt
aatcaataaaattctgtttctacaactaaaacatattgatccacttggat
ttttgtgcaagtttttttttaagattctgagctaatttccgtgcttaatc
aacgcatgataatatatttttattttgtagcaaagtactagcaaaaatcc
tcagcatgctaaaaactctgcagaacactcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81790000_81790092
seq2: B6Ng01-263L03.b_45_137

seq1  GAATTCTCGCCATATTCACCTCCAAACACTGTCCTATTCTCTTGGGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGCCATATTCACCTCCAAACACTGTCCTATTCTCTTGGGAAAA  50

seq1  AAATAAGAATAAGGAGGAGGAGAAGGGGGAGGAGGAGGAAGGA  93
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAATAAGGAGGAGGAGAAGGGGGAGGAGGAGGAAGGA  93

seq1: chr13_81920059_81921149
seq2: B6Ng01-263L03.g_67_1148 (reverse)

seq1  TTGAGTG-TCTGCAAGAGTTTTTAGCATGCTGAAGATTTTTGCTAGTTAC  49
      ||||||| ||||| ||||||||||||||||||| |||||||||||| |||
seq2  TTGAGTGTTCTGC-AGAGTTTTTAGCATGCTGAGGATTTTTGCTAG-TAC  48

seq1  TTTTGCTACAAAATAAAAATTATAATTATCATGCGTTGAATTTAAAGCAC  99
       |||||||||||||||||| ||| |||||||||||||||   | ||||||
seq2  -TTTGCTACAAAATAAAAA-TAT-ATTATCATGCGTTGA---TTAAGCAC  92

seq1  GGAAATTAGCTCAAGAATCTTAAAAAAAAACTTGCACAAAAATCCAAGTG  149
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGAAATTAGCTC-AGAATCTTAAAAAAAAACTTGCACAAAAATCCAAGTG  141

seq1  GATCAAATATGTTTTAGTTGTAGAAACAGAATTTTATTTGATTACTTTTG  199
      |||| ||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATC-AATATGTTTTAGTTGTAGAAACAGAATTTTA-TTGATTACTTTTG  189

seq1  TCTATATTGACCAAATCCAGTTCT-CCAACTTTTGGTCACTTTTAGTTAC  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTATATTGACCAAATCCAGTTCTCCCAACTTTTGGTCACTTTTAGTTAC  239

seq1  TTTTATTTTCTTTGAAATAATTTAAATTTAACTATGTATTAGAAGCATCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTCTTTGAAATAATTTAAATTTAACTATGTATTAGAAGCATCA  289

seq1  AATTTATAATAATTATTGTGTGTGTGCATGTGGGCCACAGCCATGGCACG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAATAATTATTGTGTGTGTGCATGTGGGCCACAGCCATGGCACG  339

seq1  CGTGTGGTGTCAGAAGACCATTGTTTGAGGTTGGTTCTCTCTTTTCACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGGTGTCAGAAGACCATTGTTTGAGGTTGGTTCTCTCTTTTCACAA  389

seq1  TGGGTTTCCAGTGGGGTTGCAAGGCAGGAGAATACAACTTCCCTCATCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCCAGTGGGGTTGCAAGGCAGGAGAATACAACTTCCCTCATCAG  439

seq1  GCTTGTATGAGAAATACTTTTAAGCAAAACTTTCTTTTAAAGTATTAAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTATGAGAAATACTTTTAAGCAAAACTTTCTTTTAAAGTATTAAGT  489

seq1  AATAATTTCTTCTTTATTTCACTTCCTAGAAGAATGTGAAATTTATGTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTCTTCTTTATTTCACTTCCTAGAAGAATGTGAAATTTATGTGT  539

seq1  TTCAAGAAAATTCTTCATATTAAATGAGAATATTTTACCAGCTTTTTAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAAAATTCTTCATATTAAATGAGAATATTTTACCAGCTTTTTAAT  589

seq1  TCTATCAAAGTTCCATTAAAAAAAATCTCATTATATTATTTCTCAGTAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAAAGTTCCATTAAAAAAAATCTCATTATATTATTTCTCAGTAAT  639

seq1  TTATTCCTTCTAGTTTAGTTTATTTTGTCCTTTGTTTCAAACATCTCCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTTCTAGTTTAGTTTATTTTGTCCTTTGTTTCAAACATCTCCAT  689

seq1  GTAAATGGTTTATTTTCACCTTTATTTAATACTTTTCTTCTTAGGCTTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGGTTTATTTTCACCTTTATTTAATACTTTTCTTCTTAGGCTTGG  739

seq1  TTTTACAATCTTAAAATTTTAGTAGTTTTTTTTTTCACTAGTGTTCTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAATCTTAAAATTTTAGTAGTTTTTTTTTTCACTAGTGTTCTTTA  789

seq1  GTATACATATGACGTAATCTAATTTCCTTTTTTTGTTTGTTTGTTTGTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACATATGACGTAATCTAATTTCCTTTTTTTGTTTGTTTGTTTGTTT  839

seq1  TTTCGAGACAAGGTTTCTCTGTGTAGCCCTGGCTGCCCTGGAACTCACTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAGACAAGGTTTCTCTGTGTAGCCCTGGCTGCCCTGGAACTCACTC  889

seq1  TGTAGACCAGGCTGGCCTCGAACTCAGAAATTCACCTGCCTCTGCCTCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTCGAACTCAGAAATTCACCTGCCTCTGCCTCCC  939

seq1  AAGTGCTGAGATTAAAGGCGTGAGCCACCACTGCTTGGCCTAATTTCCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTGAGATTAAAGGCGTGAGCCACCACTGCTTGGCCTAATTTCCTT  989

seq1  TTAAACTTGTTAGTAAAAGTACTTAATTTTTATATTTTAGGCAGGGTCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTGTTAGTAAAAGTACTTAATTTTTATATTTTAGGCAGGGTCTA  1039

seq1  CTACTAGTCCTGGCTGGCCTGCAATTCACAATGTAAAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGTCCTGGCTGGCCTGCAATTCACAATGTAAAGAATTC  1082