BAC Information

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BAC

Clone NameB6Ng01-265O07
Chromosome13 (Build37)
Map Location 90,602,384 - 90,603,238
singlet/doubletsinglet
Overlap genenone
Upstream geneHapln1, EG667266, Vcan, LOC100042940, Xrcc4, Tmem167, LOC100043170
Downstream geneLOC624190, EG435376, Rps23, Atg10, LOC100042959, Ssbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265O07.bB6Ng01-265O07.g
ACCGA069425GA069426
length1,235856
definitionB6Ng01-265O07.b B6Ng01-265O07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacctgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggtctgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgaaggatctgatggtgttttggatttcttcaggatctgttgt
tatgtctcccttttcatttctgattttgttaattaggattttgtccctgt
gccctttagtgagtctagctaagggtttatctatcttgttgattttctca
aagaaccaactcctcgtttggttaattctttgaatagttcttcttgtttc
cacttggttgatttcacccctgagtttgattatttcctgccgtctactcc
tcttgggtgaatttgcttcctttttttctagagcttttagatgtgttgtc
aagctgctagtatgtgctgtctcccgtttcttcttggaggcactcagcgc
tattgagtttccctcttagaaatgctttcatttgtgtcccataggtttgg
gttatgttgtggcttcatttcattaaacttctaaaagtcttaaatttctt
tctttattctttccttgaccaaaggtatcattgagaagaggtgtttgttc
aatttccagtgaaatgtttgcctccggttacttaatttttggtattcgag
atcgactttaatgctatgggggtatctggatggatactggacattcagta
tttgaactgtggaggccgcattgtcgaaccattac
gaattccaaaaccccagaaatgaggttctcacacttcaatctgctctcat
gtattgaactatatagttgttaccagggacaatgaatatccccctgtaag
cctcaccactcaagtaaacatggtcctggtgaacacccaaaagccatcaa
ctatgtgttgtattctgtgtccaaggcataatatgatctagagaggaggg
tgctatttttttatatgttgtcattttccaagtgattttaagtggtacag
gaaatcaccctatgaataaaaagaagaaattagagtctagactttgaaat
tagattgtgtgtgtgtgtgtgtgtgtgtaatagtgatgaagtgtacagaa
aaatgagattgctttttcaagctaataggtctatctattaacgagatgac
gcacttactttgcataggtaataaatccattaatgaaatgatgtgcttac
attatacctgagttttcctatagccaaaatagtggagagacttgatagat
acacagttaaaatctatctatctacatatatatgtgtatatatagaggga
tgtatatgtaaacacacatacacagaaacatatatataaaagcaaaagta
atctttttttcagtcaatgaactctagaaagaatgaatgaattactaaag
agacatcacatgaattacaagaatttatagaaaattactttctttatagt
cttgtaaatcattctctatgtgccacgtgtctttatcatccttctgtgaa
aactgaaggaataacattaaacattaactcagcaaacccatgtaggtaga
agattaacagattcctgcctgagaaactggagcttgtaaccactgcatat
tatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_90602384_90603238
seq2: B6Ng01-265O07.g_67_922

seq1  GAATTCCAAAACCCCAGAAATGAGGTTCTCACACTTCAATCTGCTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAACCCCAGAAATGAGGTTCTCACACTTCAATCTGCTCTCAT  50

seq1  GTATTGAACTATATAGTTGTTACCAGGGACAATGAATATCCCCCTGTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGAACTATATAGTTGTTACCAGGGACAATGAATATCCCCCTGTAAG  100

seq1  CCTCACCACTCAAGTAAACATGGTCCTGGTGAACACCCAAAAGCCATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCACTCAAGTAAACATGGTCCTGGTGAACACCCAAAAGCCATCAA  150

seq1  CTATGTGTTGTATTCTGTGTCCAAGGCATAATATGATCTAGAGAGGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGTTGTATTCTGTGTCCAAGGCATAATATGATCTAGAGAGGAGGG  200

seq1  TGCTATTTTTTTATATGTTGTCATTTTCCAAGTGATTTTAAGTGGTACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTTTTTATATGTTGTCATTTTCCAAGTGATTTTAAGTGGTACAG  250

seq1  GAAATCACCCTATGAATAAAAAGAAGAAATTAGAGTCTAGACTTTGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCACCCTATGAATAAAAAGAAGAAATTAGAGTCTAGACTTTGAAAT  300

seq1  TAGATTGTGTGTGTGTGTGTGTGTGTGTAATAGTGATGAAGTGTACAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGTGTGTGTGTGTGTGTGTGTGTAATAGTGATGAAGTGTACAGAA  350

seq1  AAATGAGATTGCTTTTTCAAGCTAATAGGTCTATCTATTAACGAGATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGATTGCTTTTTCAAGCTAATAGGTCTATCTATTAACGAGATGAC  400

seq1  GCACTTACTTTGCATAGGTAATAAATCCATTAATGAAATGATGTGCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTACTTTGCATAGGTAATAAATCCATTAATGAAATGATGTGCTTAC  450

seq1  ATTATACCTGAGTTTTCCTATAGCCAAAATAGTGGAGAGACTTGATAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACCTGAGTTTTCCTATAGCCAAAATAGTGGAGAGACTTGATAGAT  500

seq1  ACACAGTTAAAATCTATCTATCTACATATATATGTGTATATATAGAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTTAAAATCTATCTATCTACATATATATGTGTATATATAGAGGGA  550

seq1  TGTATATGTAAACACACATACACAGAAACATATATATAAAAGCAAAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTAAACACACATACACAGAAACATATATATAAAAGCAAAAGTA  600

seq1  ATCTTTTTTTCAGTCAATGAACTCTAGAAAGAATGAATGAATTACTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTTCAGTCAATGAACTCTAGAAAGAATGAATGAATTACTAAAG  650

seq1  AGACATCACATGAATTACAAGAATTTATAGAAAATTACTTTCTTTATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCACATGAATTACAAGAATTTATAGAAAATTACTTTCTTTATAGT  700

seq1  CTTGTAAATCATTCTCTATGTG-CACGTGTCTTTATCATCCTTCTGTGAA  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTGTAAATCATTCTCTATGTGCCACGTGTCTTTATCATCCTTCTGTGAA  750

seq1  AACTGAAGGAATAACATTAAACATTAACTCAGCAAACCCATGTAGGTAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGGAATAACATTAAACATTAACTCAGCAAACCCATGTAGGTAGA  800

seq1  AGATTAACAGAATTCTGCCTGAGAAAACCTGAGCTTGAACCCACTGCATA  849
      ||||||||||| | ||||||||| ||||  ||||||| | ||||||||||
seq2  AGATTAACAGATTCCTGCCTGAG-AAACTGGAGCTTGTAACCACTGCATA  849

seq1  -TATGAC  855
       ||||||
seq2  TTATGAC  856