BAC Information

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BAC

Clone NameB6Ng01-266G10
Chromosome13 (Build37)
Map Location 118,376,459 - 118,521,926
singlet/doubletdoublet
Overlap geneHcn1
Upstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
Downstream geneLOC100041695, LOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266G10.bB6Ng01-266G10.g
ACCGA069807GA069808
length789650
definitionB6Ng01-266G10.b B6Ng01-266G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,376,459 - 118,377,239)(118,521,277 - 118,521,926)
sequence
gaattcttgccaattttaaaggtgccatttctttaagaaatgccagaaat
atcagataacttggcaactacagatttctccagaggaagtagttttataa
acacaaagtgatgatttcaagtagcctcctccctatgtgattgttagagc
aacctcaaggttcctaaaacagttttcaaattaatgcagtgtaagagaaa
aaacagccctgtgaagtaggagtttagtacggaaagcagagggatttaat
atgaagtaaccttatgttttattattttattttagctttacttcctcctc
ctcctcctcctccttcctttttctttctttctttttaaattttattttat
tatatattttctttatttacatttcaaatgctattccgaaagttcccaac
cccccagcccccccgccctgctcccctacccacccactcccacttcttgg
ccctggcattcccctgtactggggcatataaagtttgcaagaccaagggg
cctctcttcacattgatggccgattaggtcatcttctgctacatatgcag
ctagagacatgagctctgggggtactggttagttcatattgttgttccac
ctatagggttgcagaccccttcagctccttgggtactttctctagctcct
ccattgggggccctgtgttccatcctatagatgactgtgagcatctactt
tcttgtgttttgccaggcactgacatagccctcaatacgagacagctata
tcagggttcctttcagcaaaatctcgctggcattatgca

gaattccagatcctaaaatcctacacctccagatttccagaaacatcagt
tacaaggctttctctccactggtcttctgctgtactggagcctcctgtgc
caagtgaaatcctcctgcctcctggcaaataggacaaaaacccaggccca
gccctattccaacctgaatatctccaaatctgctgactcagcccttccag
aatgatgcctgtggggcaagcccagaaactctgttcctgcttttgatcct
gaataactcattgtacacattgcaacaacactctctttcaatcagatgga
ctcaggagttgagaaggtactagaatattcaacaggattgaacattttga
taacagtgagaaatttggcttctctactccttttattttacttttgttgt
tgttttgttttgttttgttttgttttgttttgtttttgacaaggttctct
gttgaacagttctggttgtacagataattgtccctgtctcctagtgttga
gattaaaagaatgtattaccacatctggccaaacattttccttatgaaaa
tatatacataaaagcactgtggtttattgtcagtttgtttttgttttgtt
ttgttttgttttgttttgttttggtttggtttggtttggtttggtttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118376459_118377239
seq2: B6Ng01-266G10.b_46_834

seq1  GAATTCTTGCCAATTTTAAAGGTGCCATTTCTTTAAGAAATGCCAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCAATTTTAAAGGTGCCATTTCTTTAAGAAATGCCAGAAAT  50

seq1  ATCAGATAACTTGGCAACTACAGATTTCTCCAGAGGAAGTAGTTTTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATAACTTGGCAACTACAGATTTCTCCAGAGGAAGTAGTTTTATAA  100

seq1  ACACAAAGTGATGATTTCAAGTAGCCTCCTCCCTATGTGATTGTTAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGTGATGATTTCAAGTAGCCTCCTCCCTATGTGATTGTTAGAGC  150

seq1  AACCTCAAGGTTCCTAAAACAGTTTTCAAATTAATGCAGTGTAAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAAGGTTCCTAAAACAGTTTTCAAATTAATGCAGTGTAAGAGAAA  200

seq1  AAACAGCCCTGTGAAGTAGGAGTTTAGTACGGAAAGCAGAGGGATTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCCCTGTGAAGTAGGAGTTTAGTACGGAAAGCAGAGGGATTTAAT  250

seq1  ATGAAGTAACCTTATGTTTTATTATTTTATTTTAGCTTTACTTCCTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTAACCTTATGTTTTATTATTTTATTTTAGCTTTACTTCCTCCTC  300

seq1  CTCCTCCTCCTCCTTCCTTTTTCTTTCTTTCTTTTTAAATTTTATTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCCTCCTTCCTTTTTCTTTCTTTCTTTTTAAATTTTATTTTAT  350

seq1  TATATATTTTCTTTATTTACATTTCAAATGCTATTCCGAAAGTTCCCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTTCTTTATTTACATTTCAAATGCTATTCCGAAAGTTCCCAAC  400

seq1  CCCCCAGCCCCCCCGCCCTGCTCCCCTACCCACCCACTCCCACTTCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGCCCCCCCGCCCTGCTCCCCTACCCACCCACTCCCACTTCTTGG  450

seq1  CCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCAAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGACCAAGGGG  500

seq1  CCTCTCTTCACATTGATGGCCGATTAGGTCATCTTCTGCTACATATGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTCACATTGATGGCCGATTAGGTCATCTTCTGCTACATATGCAG  550

seq1  CTAGAGACATGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGACATGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCAC  600

seq1  CTATAGGGTTGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGGGTTGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGCTCCT  650

seq1  CCATTGGGGGCCCTGTGTTCCATCCTATAGATGACTGTGAGCATCTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGGGGCCCTGTGTTCCATCCTATAGATGACTGTGAGCATCTACTT  700

seq1  --CTGTG-TTTGCCAGGCACTGACATAG-CCTC-ATACGAGACAGCTATA  745
         |||| |||||||||||||||||||| |||| ||||||||||||||||
seq2  TCTTGTGTTTTGCCAGGCACTGACATAGCCCTCAATACGAGACAGCTATA  750

seq1  TCAGGGT--CCTTCAGCAAAATCTCGCTGGCA-TATGCA  781
      |||||||  | ||||||||||||||||||||| ||||||
seq2  TCAGGGTTCCTTTCAGCAAAATCTCGCTGGCATTATGCA  789


seq1: chr13_118521277_118521926
seq2: B6Ng01-266G10.g_64_713 (reverse)

seq1  ACCAAACCAAACCAAACCAAACCAAACCAAAACAAAACAAAACAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACCAAACCAAACCAAACCAAACCAAAACAAAACAAAACAAAACAA  50

seq1  AACAAAACAAAAACAAACTGACAATAAACCACAGTGCTTTTATGTATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAAACAAACTGACAATAAACCACAGTGCTTTTATGTATATA  100

seq1  TTTTCATAAGGAAAATGTTTGGCCAGATGTGGTAATACATTCTTTTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAAGGAAAATGTTTGGCCAGATGTGGTAATACATTCTTTTAATC  150

seq1  TCAACACTAGGAGACAGGGACAATTATCTGTACAACCAGAACTGTTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTAGGAGACAGGGACAATTATCTGTACAACCAGAACTGTTCAAC  200

seq1  AGAGAACCTTGTCAAAAACAAAACAAAACAAAACAAAACAAAACAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCTTGTCAAAAACAAAACAAAACAAAACAAAACAAAACAAAACA  250

seq1  ACAACAAAAGTAAAATAAAAGGAGTAGAGAAGCCAAATTTCTCACTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAAGTAAAATAAAAGGAGTAGAGAAGCCAAATTTCTCACTGTTA  300

seq1  TCAAAATGTTCAATCCTGTTGAATATTCTAGTACCTTCTCAACTCCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGTTCAATCCTGTTGAATATTCTAGTACCTTCTCAACTCCTGAG  350

seq1  TCCATCTGATTGAAAGAGAGTGTTGTTGCAATGTGTACAATGAGTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGATTGAAAGAGAGTGTTGTTGCAATGTGTACAATGAGTTATTC  400

seq1  AGGATCAAAAGCAGGAACAGAGTTTCTGGGCTTGCCCCACAGGCATCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCAAAAGCAGGAACAGAGTTTCTGGGCTTGCCCCACAGGCATCATT  450

seq1  CTGGAAGGGCTGAGTCAGCAGATTTGGAGATATTCAGGTTGGAATAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGGGCTGAGTCAGCAGATTTGGAGATATTCAGGTTGGAATAGGGC  500

seq1  TGGGCCTGGGTTTTTGTCCTATTTGCCAGGAGGCAGGAGGATTTCACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGGGTTTTTGTCCTATTTGCCAGGAGGCAGGAGGATTTCACTTG  550

seq1  GCACAGGAGGCTCCAGTACAGCAGAAGACCAGTGGAGAGAAAGCCTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGAGGCTCCAGTACAGCAGAAGACCAGTGGAGAGAAAGCCTTGTA  600

seq1  ACTGATGTTTCTGGAAATCTGGAGGTGTAGGATTTTAGGATCTGGAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGTTTCTGGAAATCTGGAGGTGTAGGATTTTAGGATCTGGAATTC  650


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