BAC Information

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BAC

Clone NameB6Ng01-267I14
Chromosome13 (Build37)
Map Location 102,619,847 - 102,620,979
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC619865, LOC619917, EG619937, 4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
Downstream geneCd180, Mast4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267I14.bB6Ng01-267I14.g
ACCGA070631GA070632
length1,1841,134
definitionB6Ng01-267I14.b B6Ng01-267I14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccataatcatcagagaaatccaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaacattctggaaatcagtctggcggttcctca
gaaaattggacattgtactaccggaggatccacaatacctctcctgggca
tatatccagaagatgtcccaatgggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcaaataatatgtactcactgataagtggatattagcccagaaact
tagtatagtgagatataaggtacaatttgcaaaacacatgaaactgaaga
aaaacgaagaccaaagtgtggacactttgccccttcttagaattggaaac
aatcacccatggaaggaattacagagacaaagtttggagctgagacaaaa
ggatggaccatcaagagactgccatatccagggatccatcccataattag
cctccaaaccatgacaccattgcatacactagcaagcgtttgttgcaagg
accatgatatagctgtctcttgtgagactaggccggggcctagcaaacac
agaagtggatgctcacagtcaactattggatggatcacaagggcccccaa
tggaggagctagagaagtattacaggagctaagagatctgcaccctgtag
tgcacattatgactaaccagtatctgagctcttgactctagctgcatatg
tatccaaagatggctagtcgcatcactggaaagagccactgactgcacct
ttatatgccagtacagggacgcaagggccaaaaaatgcatggattgtagg
ggagtgcctctcacgagcacatgaggagtatact
gaattccaggacattctgaggtacatagtgagaccctgtctcaaagaaac
taaaaagcaaaacaaaacacagcaaaacaacaacaacaaaatcaccatca
ctgccaaaacaaaacaaaaaataattttaaagtctcactaagggtcccat
tgaacctcctcttgcatatactctcataagcaaaagtacaagctggaggt
tgtgtttcctccccaaagcttagtcctggtgagctttctagttagagttt
gtcccattgttcattgtttcaaaatctatggaggctgactatctttttat
agtgtgtttttttttttttttttttgatcaccaggtttcttcttccttaa
attgttcatgttagctgctactatgttttctactctttcctctttttttt
tttagaattatttatttattttaaatatatgagtacactattgctgtctt
cagacacaccagaagacagtatcagatcctgttacagatggttgtgagcc
actgtgtggttgctgggaattgaactcaggacctctggaagagaagtcag
tgctcttaaccactgagcctctctactcttttcttaatgctgtggtagaa
gctctttgtctaatctatttagaaccagttggtggagtgcatgtaaatat
tctcatttctctttgtagcttgctttgattaccttccttacgatgtcttt
tgattgacagatcagaagaatcccaggacaggcaagttgtaaattgcaga
gcagtgctcagaaacagggaaaaaagccaagctcctttgagttaggccag
cacagaggtcagccacaagaaggagtgggagcttttagacaaagtaagat
ggcccagcagcgtttgggtacaagagtgtttgggaaggagaagatgaaaa
gcaaagctttttacaaaggctgcatggctgccacccttgaaagctgctgt
tgctggtgagcgggaatcttggaatgggaaacgtacattatcttcactaa
agcatatacctatgctgcctgttttgtagtttccccttggtatcccagac
agagaagcaaggtcatttgtaacctccctttggggtcactccctgggctt
ctgcaattcagattctgtcatatcacccctcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102619847_102620979
seq2: B6Ng01-267I14.g_65_1198

seq1  GAATTCCAGGACATTCTGAGGTACATAGTGAGACCCTGTCTCAAAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACATTCTGAGGTACATAGTGAGACCCTGTCTCAAAGAAAC  50

seq1  TAAAAAGCAAAACAAAACACAGCAAAACAACAACAACAAAATCACCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCAAAACAAAACACAGCAAAACAACAACAACAAAATCACCATCA  100

seq1  CTGCCAAAACAAAACAAAAAATAATTTTAAAGTCTCACTAAGGGTCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAAACAAAACAAAAAATAATTTTAAAGTCTCACTAAGGGTCCCAT  150

seq1  TGAACCTCCTCTTGCATATACTCTCATAAGCAAAAGTACAAGCTGGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTCCTCTTGCATATACTCTCATAAGCAAAAGTACAAGCTGGAGGT  200

seq1  TGTGTTTCCTCCCCAAAGCTTAGTCCTGGTGAGCTTTCTAGTTAGAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCCTCCCCAAAGCTTAGTCCTGGTGAGCTTTCTAGTTAGAGTTT  250

seq1  GTCCCATTGTTCATTGTTTCAAAATCTATGGAGGCTGACTATCTTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATTGTTCATTGTTTCAAAATCTATGGAGGCTGACTATCTTTTTAT  300

seq1  AGTGTGTTTTTTTTTTTTTTTTTTTGATCACCAGGTTTCTTCTTCCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTTTTTTTTTTTTTTTTTTTGATCACCAGGTTTCTTCTTCCTTAA  350

seq1  ATTGTTCATGTTAGCTGCTACTATGTTTTCTACTCTTTCCTCTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCATGTTAGCTGCTACTATGTTTTCTACTCTTTCCTCTTTTTTTT  400

seq1  TTTAGAATTATTTATTTATTTTAAATATATGAGTACACTATTGCTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATTATTTATTTATTTTAAATATATGAGTACACTATTGCTGTCTT  450

seq1  CAGACACACCAGAAGACAGTATCAGATCCTGTTACAGATGGTTGTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACCAGAAGACAGTATCAGATCCTGTTACAGATGGTTGTGAGCC  500

seq1  ACTGTGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGAAGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGAAGTCAG  550

seq1  TGCTCTTAACCACTGAGCCTCTCTACTCTTTTCTTAATGCTGTGGTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTAACCACTGAGCCTCTCTACTCTTTTCTTAATGCTGTGGTAGAA  600

seq1  GCTCTTTGTCTAATCTATTTAGAACCAGTTGGTGGAGTGCATGTAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGTCTAATCTATTTAGAACCAGTTGGTGGAGTGCATGTAAATAT  650

seq1  TCTCATTTCTCTTTGTAGCTTGCTTTGATTACCTTCCTTACGATGTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCTCTTTGTAGCTTGCTTTGATTACCTTCCTTACGATGTCTTT  700

seq1  TGATTGACAGATCAGAAGAATCCCAGGACAGGCAAGTTGTAAATTGCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGACAGATCAGAAGAATCCCAGGACAGGCAAGTTGTAAATTGCAGA  750

seq1  GCAGTGCTCAGAAACAGGGAAAAAAGCCAAGCTCCTTTGAGTTAGGCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCTCAGAAACAGGGAAAAAAGCCAAGCTCCTTTGAGTTAGGCCAG  800

seq1  CACAGAGGTCAGCCACAAGAAGGAGT-GGAGC-TTTAGACAAAGTAAGAT  848
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  CACAGAGGTCAGCCACAAGAAGGAGTGGGAGCTTTTAGACAAAGTAAGAT  850

seq1  GG-CCAGCAGCG-TTGGGTACAAGAGTG-TTGGGAAGGAG-AGATGAAAA  894
      || ||||||||| ||||||||||||||| ||||||||||| |||||||||
seq2  GGCCCAGCAGCGTTTGGGTACAAGAGTGTTTGGGAAGGAGAAGATGAAAA  900

seq1  GCAAAGCTTTTTACAAA-GCTGCATGGCTGCCACCC-TGAAAGCTGCTG-  941
      ||||||||||||||||| |||||||||||||||||| |||||||||||| 
seq2  GCAAAGCTTTTTACAAAGGCTGCATGGCTGCCACCCTTGAAAGCTGCTGT  950

seq1  TGCT-GTGAGCGGGAATTCTGGGAT-GGAAACGTACATTATC-TCACTAA  988
      |||| ||||||||||||  ||| || |||||||||||||||| ||||| |
seq2  TGCTGGTGAGCGGGAATCTTGGAATGGGAAACGTACATTATCTTCACT-A  999

seq1  AAGCA-ATAACTATGCTG-CTGTTTTGTTAGTTCCCTTTTGGTATTCCCA  1036
      ||||| ||| |||||||| |||||||| ||||| ||  |||||| |||||
seq2  AAGCATATACCTATGCTGCCTGTTTTG-TAGTTTCCCCTTGGTA-TCCCA  1047

seq1  GACAGAGAAGCAAGGTCATTTGTAACCTCCACTTTTGGTGGTCACTTCCC  1086
      |||||||||||||||||||||||||||||| ||||  | |||||| ||||
seq2  GACAGAGAAGCAAGGTCATTTGTAACCTCC-CTTT--GGGGTCAC-TCCC  1093

seq1  TGTGCTTCCTGCCCATATCAGATCTCTTGTTCATATCACCCCTCCTT  1133
      || |||| |||  ||  |||||| |||   |||||||||||||||||
seq2  TGGGCTT-CTG--CAATTCAGAT-TCT--GTCATATCACCCCTCCTT  1134