BAC Information

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BAC

Clone NameB6Ng01-268J17
Chromosome13 (Build37)
Map Location 66,204,441 - 66,205,582
singlet/doubletsinglet
Overlap genenone
Upstream geneHiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434
Downstream geneLOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268J17.bB6Ng01-268J17.g
ACCGA071421GA071422
length1,136180
definitionB6Ng01-268J17.b B6Ng01-268J17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataatcagtgttaggatattcattatggaatgatgttttttttt
gtcatgacagggtttctctgtgtaacagcccagctctcctagaacttgct
ttgcagaccaggctgacctctaactcacagacatgcttgcctctgcctcc
tgagtgctgggataaaaggcatgcaccactataacccagctagataatct
ttttagtcagatgacaaactaagtcagaaattgtggtaggatgaatggtg
tgggtgctgtggtcccagggtggggcctggtagacagttagggaggctcc
catacagctctgaccgtatgagacatgggcatgtctgtggcatattgagt
gtcttagtcagggtttctattcctgcacaaacatcatgaccaagaagcaa
gttggggaggaaagggtttattcggcttacacttccatactgctgttcat
caccaaggaagtcaggactggaactcatgcaggtcaggaagcaggagctg
atgcagaggccatggagggatgttctttactggcttgcctcacctggctt
gctcagcctactctcttatagaacccaagactaccagcccagagatcttc
ccacccacaaggggcctttcccccttgatcactaattgagaaaatgcctt
acagttggatctcatggaggcatttcctcaagtgaagctcctttctctgt
gataactccagctgtgtcaagttgacacaaaactagccagtacactgagt
aacaaaagatagaggatccttgcaaattagtgagcctgagtttgggcctg
aaacacagtggtggctgctttccccatctgcacagaagtcctgtctggtg
ttagcctccctatagtgatagtggaatggttagctaccccagagctctta
tggattccccattggtccgaaggctgtataaaaatgcctgatgctactac
acaatacaacagatatgcacctcagtgtttgtctcctgagtctgtatcca
tgaatagcaactctgccttctgcaccccttctggatccctgttcccacag
gatgaaagatattttcatacgagccacaggatatcaactaacaagctctg
cttgggaaatggatgctgattggtgaaatacactgc
gaattcaagaagaagccgggcgtggtggcacacgcctttaatcccagcac
tcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtcta
caaagtgagttccaggacagccaggactacacagagaaaccctgtctcaa
aaacaccaaaaaaaaaaaaaaaaaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66204441_66205582
seq2: B6Ng01-268J17.b_45_1180 (reverse)

seq1  GCAGTGTATTTCACCACTCAGCATCAATTTCCCCAAGCAGAGGTTTTGTT  50
      |||||||||||||||| |||||||| |||| |||||||||||   |||||
seq2  GCAGTGTATTTCACCAATCAGCATCCATTT-CCCAAGCAGAG--CTTGTT  47

seq1  AGTTTGGATATCCTGT-GCTCTGTATGAAAATATCTTTCATCCTGTGGGA  99
      ||||  |||||||||| |||| ||||||||||||||||||||||||||||
seq2  AGTT--GATATCCTGTGGCTC-GTATGAAAATATCTTTCATCCTGTGGGA  94

seq1  ACAGGGATCCAGGAAGGGGTGCAGAAGGCAGAGTTGCTA-TCATGGGATA  148
      ||||||||||| ||||||||||||||||||||||||||| |||| |||||
seq2  ACAGGGATCCA-GAAGGGGTGCAGAAGGCAGAGTTGCTATTCAT-GGATA  142

seq1  CAGACTCAGGAGACAAACACTGAGGTGCATATCTGTTGTATTGTGTAGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCAGGAGACAAACACTGAGGTGCATATCTGTTGTATTGTGTAGTA  192

seq1  GCATCAGGCATTTTTATACAGCCTTCGGACCAATGGGGAATCCATAAGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGGCATTTTTATACAGCCTTCGGACCAATGGGGAATCCATAAGAG  242

seq1  CTCTGGGGTAGCTAACCATTCCACTATCACTATAGGGAGGCTAACACCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGTAGCTAACCATTCCACTATCACTATAGGGAGGCTAACACCAG  292

seq1  ACAGGACTTCTGTGCAGATGGGGAAAGCAGCCACCACTGTGTTTCAGGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACTTCTGTGCAGATGGGGAAAGCAGCCACCACTGTGTTTCAGGCC  342

seq1  CAAACTCAGGCTCACTAATTTGCAAGGATCCTCTATCTTTTGTTACTCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGGCTCACTAATTTGCAAGGATCCTCTATCTTTTGTTACTCAG  392

seq1  TGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACAGAG  442

seq1  AAAGGAGCTTCACTTGAGGAAATGCCTCCATGAGATCCAACTGTAAGGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGCTTCACTTGAGGAAATGCCTCCATGAGATCCAACTGTAAGGCA  492

seq1  TTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAAGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAATTAGTGATCAAGGGGGAAAGGCCCCTTGTGGGTGGGAAGAT  542

seq1  CTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGTAGGCTGAGCAAGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCTGGTAGTCTTGGGTTCTATAAGAGAGTAGGCTGAGCAAGCCA  592

seq1  GGTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTC  642

seq1  CTGCTTCCTGACCTGCATGAGTTCCAGTCCTGACTTCCTTGGTGATGAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCTGACCTGCATGAGTTCCAGTCCTGACTTCCTTGGTGATGAAC  692

seq1  AGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTTGCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTATGGAAGTGTAAGCCGAATAAACCCTTTCCTCCCCAACTTGCTT  742

seq1  CTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACACTCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGACACTCAA  792

seq1  TATGCCACAGACATGCCCATGTCTCATACGGTCAGAGCTGTATGGGAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCACAGACATGCCCATGTCTCATACGGTCAGAGCTGTATGGGAGCC  842

seq1  TCCCTAACTGTCTACCAGGCCCCACCCTGGGACCACAGCACCCACACCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAACTGTCTACCAGGCCCCACCCTGGGACCACAGCACCCACACCAT  892

seq1  TCATCCTACCACAATTTCTGACTTAGTTTGTCATCTGACTAAAAAGATTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTACCACAATTTCTGACTTAGTTTGTCATCTGACTAAAAAGATTA  942

seq1  TCTAGCTGGGTTATAGTGGTGCATGCCTTTTATCCCAGCACTCAGGAGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGGGTTATAGTGGTGCATGCCTTTTATCCCAGCACTCAGGAGGC  992

seq1  AGAGGCAAGCATGTCTGTGAGTTAGAGGTCAGCCTGGTCTGCAAAGCAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAAGCATGTCTGTGAGTTAGAGGTCAGCCTGGTCTGCAAAGCAAG  1042

seq1  TTCTAGGAGAGCTGGGCTGTTACACAGAGAAACCCTGTCATGACAAAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGAGAGCTGGGCTGTTACACAGAGAAACCCTGTCATGACAAAAAA  1092

seq1  AAACATCATTCCATAATGAATATCCTAACACTGATTATGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCATTCCATAATGAATATCCTAACACTGATTATGAATTC  1136