BAC Information

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BAC

Clone NameB6Ng01-268L07
Chromosome13 (Build37)
Map Location 76,870,985 - 76,872,030
singlet/doubletsinglet
Overlap geneMctp1
Upstream geneEll2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276, LOC666603
Downstream geneEG666607, Ankrd32, 2210408I21Rik, LOC631139, LOC675063, D13Mgi7, 1110033M05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268L07.bB6Ng01-268L07.g
ACCGA071493GA071494
length1,0451,079
definitionB6Ng01-268L07.b B6Ng01-268L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaaatattcagcaactttctccagtatgtgccttttgagtc
ctggtcttttggtgaattatctctttgttgtcagcagtctaagaactgga
aagtagctaactgtacataagaagtacttcataaagcagatgaagacacc
atagcaaacataaaacagtacttttatacatattttcttaattccccccc
aaaagggaagatgatgaaattgaataacaagtaacagcatgatttgatca
gaatggaaaaagaaagattgccaatgttccagggtctaaaaaaatcagaa
ttattaaaagcaatattgaccttttaagtaaaattttgaataaatgtcag
ttttaccaaggaaatctgatttgtttcaaagcacagtcatataaaagttc
agtttcatcttgatatttcgttcaagagtggtactatcaccaaaggtact
aaaagcttaatatgtgccttacatatctttagacggatatggaaagctct
tgttctgggagtgagatgaggtactgagggagaattgtcctcaaggagcc
atgacagaacatatgagtttaaaaagtccatactcaattttccatgaaac
aaaacagaatgtttatggccctctgtctggagttgtccctgccccagttc
atcacttccattctggagcagagtgattttgtagaccctgttgtgcacat
agtagagactggatgctgcgaatgaggctggagagtgattggaggacagc
aagagaatggtctgagtgctctgcaccagtgaggttcctatgacttagaa
agcattgcatgatttgcttaaagattatgaggagggaaaaaagagcaact
ggcaatgatgaaactttgtggtacagcttggaacgggatggggaaggatt
tggaaaagcagctaacagtcttctcaacgaggaaagctgaagatcacatg
ctaagagttaccttactggatctttctactcttcctcattagcagtagtc
tgtagatgaaataaagtagttcattatcttcatccagtaccgaac
gaattctgcaccaaatccatctggtcccaggctttttatggttggagact
tttaatgactgcttctatttctttagggggtatgggactgtttagacggt
ttatttgatcttgatttaactttggtatttggtatctgtctagaaaattg
ttcatttcatccagattttccagttttgttgaatatatgcttttgtagtt
ggatctgatgattctttgaatttcctccatttctgttgttatatctcaat
tttcatttctgattttttaatttggatactgtctctgtgccttctggtta
gtctggctaagggttcatctatcttcttgattttctcaaagaatcagctc
ctggttttgttgatttctttgtatagttctttttgtttctttttggttga
tttcagccctgagtttgattatttcctgctgcctactcctcttgggtgta
tttgcttctttttgttctagagctttcaggtgtgctcttaagctgctagt
gtatgctctctccagtttctttttggaggcactcagagctgagttttcct
cttagtactgctttcattgtgtcccataaggtggggtatgttgtgccttc
attttcataaaattctaaaaatctttaatttctttacttcttccttgacc
aagttatcattaagtagagctttgttcagcttccatatatatgtgggctt
tctgttgtttttgttgctcttaaagaccatgttgatctgataggaggcat
aggattattttaatcatgtgactgttgaggcctgttttgtgcccaattag
atggttagtttgggacaaggtaccatggggtgctgagaaggtatatcctt
ttgttttaggatgaaatgttctatagatatctgttaaatccacttggttt
ataacttctgtaagtttccatgtgccactgtttagtttctgtttccatga
tcttgtccatggatgagagtgtgtgttgaggtctccacttatattgtgtg
aaggtgcaatgtatgcttgagccttattttaggaatgtttggtgcccttt
gaaatctggaagcatagaagtttcagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76870985_76872030
seq2: B6Ng01-268L07.b_45_1089 (reverse)

seq1  GTTCGGTACTGGATGAAAGATAATGAAATACTTTATTTCATTTACAGAC-  49
      ||||||||||||||| ||||||||||| ||||||||||||| ||||||| 
seq2  GTTCGGTACTGGATG-AAGATAATGAACTACTTTATTTCATCTACAGACT  49

seq1  AATGCTAATGAGGAAGAGTTGGAAAAGATCCAGTAAGGTAATTCTTAGCA  99
      | ||||||||||||||||| |  |||||||||||||||||| ||||||||
seq2  ACTGCTAATGAGGAAGAGTAG--AAAGATCCAGTAAGGTAACTCTTAGCA  97

seq1  TGTGATCTTCAGCTTTCCTTGTTGAGAAGACTGTTAGCTGCTTTTCCAAA  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTGATCTTCAGCTTTCCTCGTTGAGAAGACTGTTAGCTGCTTTTCCAAA  147

seq1  TCCTT-CCCATCCCCTTCCAAGCTGTACCACAAAGTTTCATCATTGCCAG  198
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCCATCCCGTTCCAAGCTGTACCACAAAGTTTCATCATTGCCAG  197

seq1  TTGCTCTTTTTTCCCTCCTCATAATCTTTAAGCAAATCATGCAATGCTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTTTTTCCCTCCTCATAATCTTTAAGCAAATCATGCAATGCTTT  247

seq1  CTAAGTCATAGGAACCTCACTGGTGCAGAGCACTCAGACCATTCTCTTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCATAGGAACCTCACTGGTGCAGAGCACTCAGACCATTCTCTTGC  297

seq1  TGTCCTCCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCTACTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCCAATCACTCTCCAGCCTCATTCGCAGCATCCAGTCTCTACTAT  347

seq1  GTGCACAACAGGGTCTACAAAATCACTCTGCTCCAGAATGGAAGTGATGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAACAGGGTCTACAAAATCACTCTGCTCCAGAATGGAAGTGATGA  397

seq1  ACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGCAGGGACAACTCCAGACAGAGGGCCATAAACATTCTGTTTTGT  447

seq1  TTCATGGAAAATTGAGTATGGACTTTTTAAACTCATATGTTCTGTCATGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAAATTGAGTATGGACTTTTTAAACTCATATGTTCTGTCATGG  497

seq1  CTCCTTGAGGACAATTCTCCCTCAGTACCTCATCTCACTCCCAGAACAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGAGGACAATTCTCCCTCAGTACCTCATCTCACTCCCAGAACAAG  547

seq1  AGCTTTCCATATCCGTCTAAAGATATGTAAGGCACATATTAAGCTTTTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCATATCCGTCTAAAGATATGTAAGGCACATATTAAGCTTTTAG  597

seq1  TACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTGGTGATAGTACCACTCTTGAACGAAATATCAAGATGAAACTGA  647

seq1  ACTTTTATATGACTGTGCTTTGAAACAAATCAGATTTCCTTGGTAAAACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATATGACTGTGCTTTGAAACAAATCAGATTTCCTTGGTAAAACT  697

seq1  GACATTTATTCAAAATTTTACTTAAAAGGTCAATATTGCTTTTAATAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTATTCAAAATTTTACTTAAAAGGTCAATATTGCTTTTAATAATT  747

seq1  CTGATTTTTTTAGACCCTGGAACATTGGCAATCTTTCTTTTTCCATTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTTTTAGACCCTGGAACATTGGCAATCTTTCTTTTTCCATTCTG  797

seq1  ATCAAATCATGCTGTTACTTGTTATTCAATTTCATCATCTTCCCTTTTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATCATGCTGTTACTTGTTATTCAATTTCATCATCTTCCCTTTTGG  847

seq1  GGGGGAATTAAGAAAATATGTATAAAAGTACTGTTTTATGTTTGCTATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAATTAAGAAAATATGTATAAAAGTACTGTTTTATGTTTGCTATGG  897

seq1  TGTCTTCATCTGCTTTATGAAGTACTTCTTATGTACAGTTAGCTACTTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCATCTGCTTTATGAAGTACTTCTTATGTACAGTTAGCTACTTTC  947

seq1  CAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAAAGACCAGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTAGACTGCTGACAACAAAGAGATAATTCACCAAAAGACCAGGA  997

seq1  CTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTTTCTGGAATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGGCACATACTGGAGAAAGTTGCTGAATATTTTCTGGAATTC  1045