BAC Information

Click to search

BAC

Clone NameB6Ng01-269F21
Chromosome13 (Build37)
Map Location 66,725,995 - 66,846,634
singlet/doubletdoublet
Overlap geneMzf6d, Vmn2r-ps106, LOC666027
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
Downstream geneLOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269F21.bB6Ng01-269F21.g
ACCGA071985GA071986
length1,0991,096
definitionB6Ng01-269F21.b B6Ng01-269F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,845,536 - 66,846,634)(66,725,995 - 66,727,087)
sequence
gaattctggtacatcagctataataacccgcagcaggaaatcaaccagtc
cttgatttttctaatttctgttggctgagagcctttattgggacattcta
ttaaatttcctttctatctacatagagagattcattctatatttgagata
tgtttatctagagaacctgtactaatccaactgtggtttttctctatttc
gccactgatgaagatgtgctgtctattaagagggcacaacagtgtttccc
ttatgtttctggcttttctcccagggttatttaatgcctatcattggtga
aagggtgctgtggtttccctgagcccagcacgaagccacaaatctaaact
ctcatttcctaaaaatccctctttaatgttaattgcctaggcatccttcc
actcagtgggtcagattgatacctacactgcacaggagtaatgggctatg
taagccattcaccttgatttcaggaagaagagggcaagtaagctcaggaa
agctcaggtaaggtctgaagtcaggccctggtaagtgcaggatcattgct
cacagagggaggagcaggcagctgaatagcctaaactggtctggtgagtt
ttcccacagggtagagtgggtgagtatacccttggagggcaaggacaaat
ggtaatggagtgcaaaccagggctcaaatccggaaaaggtcaggcactgg
acctgaagcatactttaaccttgaggcagggtaagattcattggccaata
aacgcctcctggaagacctgccagtgagacaaggaggcgggatcttccag
gtgcctttcttcaagttctctatggctgtgcagacttgaatggctctctg
tgtcctgctctgaactcaggtgttgggtgctgtaaagggaccttcagcga
agttctgaagttgagacacaggtcactgcccacaattcagaggagcaggt
agcaatgggagctgggttggtgggtctctctggatggcaagtatagccat
atgtggaggtcccttgtgatgcctcctcatttggctagatcaggcagtga
ccctctgaatagctccctatcattgactgaatctgaatctgccaacgtt
gaattctggtacatcagctataaaaacccgcagcaggaaatcaaccagtc
cttgatttttctaatttcggttggctgagagcctttattgggacattcta
ttaaatttcctttctatatacatacattcattgtatgatttgagatatgt
ttatctagagaacctgtactaatccaactgtggtttttctctatttcgcc
actgatgaagatgtgctgtctaataagagggcacaacagtgtttccctta
tgtttctggcttttctcccagggttgtttgattcctatcatctggtgaaa
gggagctgtggtttccctgagcccagcacgaagccacaaatcaaaactct
tgtttcctaaaatacctctttaatattaattgcctaggcacccttccact
cagtgggtcagattgttacctacactgcacaggagtaatgggctatgtga
gctattcaccttgatttcaggaagaggagggcaagtactgtgaggaaagc
tcaggcaaggtctgaagtcaggccctggtaagtgcaggatcattgctcac
agagggaggagcaggcagctgaatagcctaaactggtctggtgagttttc
ccccaggttagggtgggtgagtaatcccttggagggcaaggacaaatgct
aatggaatgcaaagcactgctcaaatccggaaaaggtcaggtcctggacc
tgaagcatactttaaccttgaggcagggtaagattcattggccaataaac
gcctccaggaagacatgccagttagacaaggaggcgggatcttccaggtg
cctttcttcaagttctctatggctgtgcagacttgaatggctctctgtgt
cctgctctgagctcaggtgttgggtgttgtaaaggggacctcagcgaagc
tctgaagttgagacacagggtccactgtccacatttcagaggagcagtag
caatggggagctgggtggtgggtctctctggatggccagtataagcccat
atgtgaggtcctttggtgtgcttcctcacttgctagaatcagcagtgact
ctgatagcttttcctattcatggcctgattctgaatctgccaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66845536_66846634
seq2: B6Ng01-269F21.b_47_1145 (reverse)

seq1  AACGTTTGGGCAGATTCAGAATCAG-CCATGATAGGGAAGTTATTCAGA-  48
      ||||||  |||||||||||| |||| | ||||||||| || |||||||| 
seq2  AACGTT--GGCAGATTCAGATTCAGTCAATGATAGGG-AGCTATTCAGAG  47

seq1  GGTCACTGCCTGATCTAG-CAAGTGATGA-GCAACACAAGGGACCT-CAC  95
      |||||||||||||||||| ||| ||| || ||| |||||||||||| |||
seq2  GGTCACTGCCTGATCTAGCCAAATGAGGAGGCATCACAAGGGACCTCCAC  97

seq1  ATATGGCTTATACTTGCCATCCCAGAGAGGACCCACC-ACCCAGCTCCCA  144
      ||||||| |||||||||||| ||||||| |||||||| ||||||||||||
seq2  ATATGGC-TATACTTGCCAT-CCAGAGA-GACCCACCAACCCAGCTCCCA  144

seq1  TTGCTACCTGCTCCTCTGAATTGTGGGCAGTGACCCTGTGTCTCAACTTC  194
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGCTACCTGCTCCTCTGAATTGTGGGCAGTGA-CCTGTGTCTCAACTTC  193

seq1  AGAACTTTGCTG-AGGTCCCCTTACAGCACCCAACACCTGAGTTCAGAGC  243
      ||||||| |||| ||||||| |||||||||||||||||||||||||||||
seq2  AGAACTTCGCTGAAGGTCCCTTTACAGCACCCAACACCTGAGTTCAGAGC  243

seq1  AGGACACAGAGAGCCATTCAAGTCTGCACTGCCATAGTGAACTTGCAGAA  293
      ||||||||||||||||||||||||||||| ||||||| ||||||| ||||
seq2  AGGACACAGAGAGCCATTCAAGTCTGCACAGCCATAGAGAACTTGAAGAA  293

seq1  AGGCACCTGGAAGATCCCGCCTCCTTGTCTCACTGGCAGGTCTTCCAGGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCTGGAAGATCCCGCCTCCTTGTCTCACTGGCAGGTCTTCCAGGA  343

seq1  GGCGTTTATTGGCCAATGAATCTTACCCTGCCTCAAGGTTAAAGTATGCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTTATTGGCCAATGAATCTTACCCTGCCTCAAGGTTAAAGTATGCT  393

seq1  TCAGGTCCAGGGCCTGACCTTTTCCGGATTTGAGCCCTGGTTTGCACTCC  443
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCCAGTGCCTGACCTTTTCCGGATTTGAGCCCTGGTTTGCACTCC  443

seq1  ATTAGCATTTGTCCTTGCCCTCCAAGGGAATACTCACCCACTCTACCCTG  493
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATTACCATTTGTCCTTGCCCTCCAAGGGTATACTCACCCACTCTACCCTG  493

seq1  TGGGAAAACTCACCAGACCAGTTTAGGCTATTCAGCTGCCTGCTCCTCCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAACTCACCAGACCAGTTTAGGCTATTCAGCTGCCTGCTCCTCCC  543

seq1  TCTGTGAGTAATGATCCTGCACTTACAAGGGCCTGACTTCAGACCTTACC  593
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TCTGTGAGCAATGATCCTGCACTTACCAGGGCCTGACTTCAGACCTTACC  593

seq1  TGAGCTTTCCTGAGCTTACTTGCCCTCTTCTTCCTGAAATCAAGGTGAAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTCCTGAGCTTACTTGCCCTCTTCTTCCTGAAATCAAGGTGAAT  643

seq1  GGCTTACATAGCCCATTACTCCTGTGCAGTGTAGGTATCAATCTGACCCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACATAGCCCATTACTCCTGTGCAGTGTAGGTATCAATCTGACCCA  693

seq1  CTGAGTGGAAGAATGCCTAGGCAATTAACATTAAAGAGGGATTTTTAGGA  743
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGGAAGGATGCCTAGGCAATTAACATTAAAGAGGGATTTTTAGGA  743

seq1  AACGAGAGTTTTGATTTGTGGCTTCATGCTGGGCTCAGGGAAACCACAGC  793
      || |||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  AATGAGAGTTTAGATTTGTGGCTTCGTGCTGGGCTCAGGGAAACCACAGC  793

seq1  ACCCTTTCACCAATGATAGGCATTAAATAACCCTGGGAGAAAAGCCAGAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCACCAATGATAGGCATTAAATAACCCTGGGAGAAAAGCCAGAA  843

seq1  ACATAAGGGAAACACTGTTGTGCCCTCTTAATAGACAGCACATCTTCATC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGGGAAACACTGTTGTGCCCTCTTAATAGACAGCACATCTTCATC  893

seq1  AGTGGCGAAATAGAGAAAAACCACAGTTGGATTAGTACAGGTTCTCTAGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCGAAATAGAGAAAAACCACAGTTGGATTAGTACAGGTTCTCTAGA  943

seq1  TAAACATATCTCAAATATAGAATGAATCTCTCTATGTAGATAGAAAGGAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATATCTCAAATATAGAATGAATCTCTCTATGTAGATAGAAAGGAA  993

seq1  ATTTAATAGAATGTCCCAATAAAGGCTCTCAGCCAACAGAAATTAGAAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAGAATGTCCCAATAAAGGCTCTCAGCCAACAGAAATTAGAAAA  1043

seq1  ATCAAGGACTGGTTGATTTCCTGCTGCGGGTTATTATAGCTGATGTACCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGACTGGTTGATTTCCTGCTGCGGGTTATTATAGCTGATGTACCA  1093

seq1  GAATTC  1099
      ||||||
seq2  GAATTC  1099

seq1: chr13_66725995_66727087
seq2: B6Ng01-269F21.g_67_1162

seq1  GAATTCTGGTACATCAGCTATAAAAACCCGCAGCAGGAAATCAACCAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTACATCAGCTATAAAAACCCGCAGCAGGAAATCAACCAGTC  50

seq1  CTTGATTTTTCTAATTTCGGTTGGCTGAGAGCCTTTATTGGGACATTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTTTCTAATTTCGGTTGGCTGAGAGCCTTTATTGGGACATTCTA  100

seq1  TTAAATTTCCTTTCTATATACATACATTCATTGTATGATTTGAGATATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTCCTTTCTATATACATACATTCATTGTATGATTTGAGATATGT  150

seq1  TTATCTAGAGAACCTGTACTAATCCAACTGTGGTTTTTCTCTATTTCGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAGAGAACCTGTACTAATCCAACTGTGGTTTTTCTCTATTTCGCC  200

seq1  ACTGATGAAGATGTGCTGTCTAATAAGAGGGCACAACAGTGTTTTCCTTA  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGATGAAGATGTGCTGTCTAATAAGAGGGCACAACAGTGTTTCCCTTA  250

seq1  TGTTTCTGGCTTTTCTCCCAGGGTTGTTTGATTCCTATCATCTGGTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGGCTTTTCTCCCAGGGTTGTTTGATTCCTATCATCTGGTGAAA  300

seq1  GGGAGCTGTGGTTTCCCTGAGCCCAGCACGAAGCCACAAATCAAAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTGTGGTTTCCCTGAGCCCAGCACGAAGCCACAAATCAAAACTCT  350

seq1  TGTTTCCTAAAATACCTCTTTAATATTAATTGCCTAGGCACCCTTCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTAAAATACCTCTTTAATATTAATTGCCTAGGCACCCTTCCACT  400

seq1  CAGTGGGTCAGATTGTTACCTACACTGCACAGGAGTAATGGGCTATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTCAGATTGTTACCTACACTGCACAGGAGTAATGGGCTATGTGA  450

seq1  GCTATTCACCTTGATTTCAGGAAGAGGAGGGCAAGTACTGTGAGGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCACCTTGATTTCAGGAAGAGGAGGGCAAGTACTGTGAGGAAAGC  500

seq1  TCAGGCAACGTCTGAAGTCAGGCCCTGGTAAGTGCAGGATCATTGCTCAC  550
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAAGGTCTGAAGTCAGGCCCTGGTAAGTGCAGGATCATTGCTCAC  550

seq1  AGAGGGAGGAGCAGGCAGCTGAATAGCCTAAACTGGTCTGGTGAGTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGGAGCAGGCAGCTGAATAGCCTAAACTGGTCTGGTGAGTTTTC  600

seq1  TTCCAGGTTAGGGTGGGTGAGTAATCCCTTGGAGGGCAAGGACAAATGCT  650
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGTTAGGGTGGGTGAGTAATCCCTTGGAGGGCAAGGACAAATGCT  650

seq1  AATGGAATGCAAAGCACTGCTCAAATCCGGAAAAGGTCAGGTCCTGGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATGCAAAGCACTGCTCAAATCCGGAAAAGGTCAGGTCCTGGACC  700

seq1  TGAAGCATACTTTAACCTTGAGGCAGGGTAAGATTCATTGGCCAATAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCATACTTTAACCTTGAGGCAGGGTAAGATTCATTGGCCAATAAAC  750

seq1  GCCTCCAGGAAGACCTGCCAGTTAGACAAGGAGGCGGGATCTTCCAGGTG  800
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGGAAGACATGCCAGTTAGACAAGGAGGCGGGATCTTCCAGGTG  800

seq1  CCTTTCTGCAAGTTCTCTATGGCTGTGCAGACTTGAATGGCTCTCTGTGT  850
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTCAAGTTCTCTATGGCTGTGCAGACTTGAATGGCTCTCTGTGT  850

seq1  CCTGCTCTGAGCTCAGGTGTTGGGTGCTGT-AAGGGGACCTCAGCGAAGC  899
      |||||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  CCTGCTCTGAGCTCAGGTGTTGGGTGTTGTAAAGGGGACCTCAGCGAAGC  900

seq1  TCTGAAGTTGAGACACAGGGT-CACTGCCCACAATTCAGAGGAGCAGGTA  948
      ||||||||||||||||||||| ||||| ||||| |||||||||||| |||
seq2  TCTGAAGTTGAGACACAGGGTCCACTGTCCACATTTCAGAGGAGCA-GTA  949

seq1  GCAGT-GGGAGCTGGGTGGTGGGTCCTCTCTGGGATGGCAAGTATAAG-C  996
      ||| | |||||||||||||||||| |||||| ||||||| |||||||| |
seq2  GCAATGGGGAGCTGGGTGGTGGGT-CTCTCT-GGATGGCCAGTATAAGCC  997

seq1  CATATGTGAGGTCCCTT-GTGTTGCTCCTCACTTGCTAG-ATCAGGCAGT  1044
      |||||||||||||| || ||||   |||||||||||||| |||| |||||
seq2  CATATGTGAGGTCCTTTGGTGTGCTTCCTCACTTGCTAGAATCA-GCAGT  1046

seq1  GACCTCTGAATAGC-TTCCCTA-TCATGG-CTGATTCTGAATCTGCCCAA  1091
      || ||||| ||||| || |||| |||||| ||||||||||||||||| ||
seq2  GA-CTCTG-ATAGCTTTTCCTATTCATGGCCTGATTCTGAATCTGCCAAA  1094

seq1  AA  1093
      ||
seq2  AA  1096