BAC Information

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BAC

Clone NameB6Ng01-269L08
Chromosome13 (Build37)
Map Location 22,156,736 - 22,157,365
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj
Downstream geneLOC665690, V1rh17, V1rh2, V1ri8, LOC632534, V1ri1, V1ri9, OTTMUSG00000000480, V1ri6, LOC665726, V1rh21, V1ri3, V1rh4, V1rh3, V1rh1, LOC665749, V1ri4, V1ri7, V1rh11, OTTMUSG00000000494, V1rh8, V1rh7, LOC382740, LOC432735, V1rh9, OTTMUSG00000000514, V1rh10, V1rh20, V1rh18, V1rh6, V1rh5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269L08.bB6Ng01-269L08.g
ACCGA072231GA072232
length1,034736
definitionB6Ng01-269L08.b B6Ng01-269L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgccccaatttagcaggaagcaattaagagtccttaaattgg
gatgaatggttttggtcgtttgatgttagttatggttatctaggatagta
ggttgttttgtttaattgatagaaatttaaggtttgcttaattattgtat
attgatagaaatttaagcttgttttgtttgaattattgtatattgataga
aatgtaaagttgtttggttagactattgtctgactatcctgtacataagc
tatttgtttaaggcatgatgtaaagctctagttttagggttcttatactt
gtttctattgtgtgtagattgttaatgttagaaaaaagattttttttaaa
aaaacagaaaggggaatatgaagtgggaatttctggtttccttggagatt
cagttgtgtcatgtgatgtttttctggagactgtcttattagaggatgtt
ttgctgagtggtgtttttctggaagctgcctggaaaaggggcatgtaatg
ttttcctggagtagaggcttgagaggacatgtgatgtctgaaaagggtat
aagtataactcaacagacagtggacgacgctgctggtctttccttgggct
ttgctgatgctggtcttcactgacaatgctgtggcatttggttcgcctgg
ccttcttcactgatcatcattttgtcatgacttcatagagagaaatgcac
caaagaatttctcatgatattctggtagcttcttgccaattctgcagagt
ccagacgattgacagagcctcaaagtttcttctggatggaactgccattt
gcttggttcatgaatggtgttctgagtggatcaaactgctgcttgctgat
ttgtgtgaacctgaactgctgattattctgacaggaaaactggaatttac
cccaaatgaactattctaaacaggtccacatcctccttttgccctattaa
ccctttccttttcatctacctctggggggtggttgagctaataaggaagg
ttaatatgttttataaccctcattattatattgc
gaattccttttttttttttaagggatggggggggggaatcagaaaataaa
atggttagacttaagaaagctacctgtagcacttgttgtctagtctctgt
atgctttgaaagttcagggtttaactgaagtcctgatgtctaaaaggctg
gatgaactggagttattggggatcagcagccattcctgaagctgttctgg
aaataagtctctagaaacaacatcagatgaggcaagatcaggcagggagc
tggaaatgacttgctagtcatttcagcatccccaggggtgaattttgtca
aaactgcttcttgatgtttcattctgaaatatatgaatcttacaagaaat
atttagttctataaagatagttgtatggatggattgtacaagatgcagta
gttacagcaatgtaactgtgacaactgaggtcccagagagaagttgtgac
agccaaggctctacaacacttagatacaaatgcagttccaggaggctcac
cttttaggtcaaaccagaacctgactgcaccacagctgccaaggtgagtg
gacctggaggtctctggttttatacaagtgccaagtaaatttcccacaga
agccaaaatgttcatctcttttctagtgttctagggcgtcaagagagggt
ttgaaatacgtaagaccttccctctactgcctatacctaaatttgtgtgg
ctaagccaagagaataaagaggacgaggaggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_22156736_22157365
seq2: B6Ng01-269L08.g_227_800 (reverse)

seq1  TCCTTCCTCCTCTTCCTTTTTGTCCTCCTCATCATCTTCCTCCTTATCCT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCCTCCTCCTCCTCCTCGTCCTCCTTCTTCTCTTGGCTTAGCCACACA  100
           ||||  |||||||||||||| || |||||||||||||||||||||
seq2  -----TCCT--TCCTCCTCGTCCTCTTTATTCTCTTGGCTTAGCCACACA  43

seq1  AATTTAGGTATAGGCAGTAGAGGGAAGGTCTTACGTATTTCAAACCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGGTATAGGCAGTAGAGGGAAGGTCTTACGTATTTCAAACCCTCT  93

seq1  CTTGACGCCCTAGAACACTAGAAAAGAGATGAACATTTTGGCTTCTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACGCCCTAGAACACTAGAAAAGAGATGAACATTTTGGCTTCTGTGG  143

seq1  GAAATTTACTTGGCACTTGTAT-AAACCAGAGACCTCCAGGTCCACTCAC  249
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAAATTTACTTGGCACTTGTATAAAACCAGAGACCTCCAGGTCCACTCAC  193

seq1  CTTGGCAGCTGTGGTGCAGTCAGGTTCTGGTTTGACCTAAAAGGTGAGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCAGCTGTGGTGCAGTCAGGTTCTGGTTTGACCTAAAAGGTGAGCC  243

seq1  TCCTGGAACTGCATTTGTATCTAAGTGTTGTAGAGCCTTGGCTGTCACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTGCATTTGTATCTAAGTGTTGTAGAGCCTTGGCTGTCACAA  293

seq1  CTTCTCTCTGGGACCTCAGTTGTCACAGTTACATTGCTGTAACTACTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCTGGGACCTCAGTTGTCACAGTTACATTGCTGTAACTACTGCA  343

seq1  TCTTGTACAATCCATCCATACAACTATCTTTATAGAACTAAATATTTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTACAATCCATCCATACAACTATCTTTATAGAACTAAATATTTCTT  393

seq1  GTAAGATTCATATATTTCAGAATGAAACATCAAGAAGCAGTTTTGACAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATTCATATATTTCAGAATGAAACATCAAGAAGCAGTTTTGACAAA  443

seq1  ATTCACCCCTGGGGATGCTGAAATGACTAGCAAGTCATTTCCAGCTCCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCCCTGGGGATGCTGAAATGACTAGCAAGTCATTTCCAGCTCCCT  493

seq1  GCCTGATCTTGCCTCATCTGATGTTGTTTCTAGAGACTTATTTCCAGAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATCTTGCCTCATCTGATGTTGTTTCTAGAGACTTATTTCCAGAAC  543

seq1  AGCTTCAGGAATGGCTGCTGATCCCCAATAA  630
      |||||||||||||||||||||||||||||||
seq2  AGCTTCAGGAATGGCTGCTGATCCCCAATAA  574