BAC Information

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BAC

Clone NameB6Ng01-273B23
Chromosome13 (Build37)
Map Location 31,824,570 - 31,825,604
singlet/doubletsinglet
Overlap genenone
Upstream geneIrf4, Exoc2, Hus1b, EG432743, LOC100041257, LOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2
Downstream geneFoxc1, 4930548F15Rik, Gmds, LOC666212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273B23.bB6Ng01-273B23.g
ACCGA074773GA074774
length1,2031,029
definitionB6Ng01-273B23.b B6Ng01-273B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtacatgaacttcatccttttcaatatcattttaaaaata
tttatttatctttatctcatgcctaagagtgtttgtctacttgtatgtat
atacactgcatacatgcccaagtcccatggagaccacaagggtcagatct
tctaaagaatcgtatgagcctcctcatgggtgcttggtaccaaacactgg
tcctctacaggagcaacaagtgtcctacctgctgggccatctctacagac
cctatttttaacatccttgcatacaatctaagaaagaaaatcttctacac
ccccttttaaaagccaatcatacatcaataaatatatcagaaatatgttg
tgaacctcattttattttagaaaaaaaatgctagattttaaaatgctaaa
tttcggaagtaattgtcaaatttacaaaagttcttcagtaaaaacagaat
atcaaagcaaaagtgtatttatattttgtattctgtatcaatgtaggaaa
actgttgggatttataaaagctttggtgggcaaaggtaagatgctaggaa
gaacaggtaaatgttgagaacaagctgagttcatctcacagagcatatgc
atgtgcatctcgactcctactaacttggaaagttccggagaatgtaagag
tgctcatgtcgaaaagctcttcactaaccctacatccaacagagggctaa
tatccaaaatatataaagaactcaagaagttagacaccaacaaaccaaat
aacccaattaaaaatggggtacagagctaaacagaaaaatctcaacagag
gaacctctagtgaccaaccaacatacaaagatatgttcaacatccctagt
cataagagaaatgcaaatcaaaattgtgggagcgggtgtggcggcagtcc
caaaggcgccagagactgcagctaagtcatatgacttgcacctgacttcc
tcatataagacacaaacatcttgagtgctgcgcaggtgtaccaggataca
ggtgaattccaatttggtggagatttgcccctgatgcctgattagctgag
ctgcctgctgggtgaagtggtgtggcctgctgtgcgtggatggactggag
agttatattaagagtggagaggctcggggttagaggggaggatattaatc
gaggagagaatactatttagttgggggagaatatttaaaaacgacgggag
gga
gaattcacttctacatgttcttgtgggctgcagtgccctacagaggttct
cagtgtcattcccctcccccaccccccaccccaaggacagaatcggaaat
aaaatactgtgaggttctggggactggaccaggttttcaatttctttaga
ctactgctgaactttctaagcaacctgatccatttgggaagttgtgatca
tatgatggagaactcagaaacagaatgttccctgctgtggtcagatgctg
tcttccgacctcgtaggagtgcccatgcctgctgccttctcctttccggc
ttccagcatcttcatgctctgactttgcaggtcacaatccatcagagagt
tgaagtgtatggggagtaaagttattaaaagtcgtcactagactctacct
tccatctgaatactccagcaccacccatcaagaacagcttcgcaaagcag
cctcactctccagactgagtcttgtacagaggaaggtgggacctgtgcct
gtttagcagtaactcaggctttcctacatggaaaggtaaggaaggcaact
cttggacagaaaacagaggagtgctaaccagggtttaagaaaaggggaaa
cgatgagtgctacatagcaaaaaattacacacacacacacacacacacac
acacacacacacacacacatatgcatatatgcacatacatacacacatgt
acatacacatacatacatacacatacatacatacacatatacatatacat
atgcatacacatatattgccacagtaagaatataaattaacatactgctt
tttatggcaaagcagaagagaactttgaactctcgtgtgttctatggtaa
aagcagctatagtctatatcttgaatgtcccccaaaattctctgtgttga
aagcatggtctctgttttcctgtgatattgggaagtgagcctagtgggac
gatgtagtgcattgagagtgtgctcagctcactgtgccccacatttctgc
atgatacactgcatgtgtagaccaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_31824570_31825604
seq2: B6Ng01-273B23.g_68_1096 (reverse)

seq1  TGCTTTGGGTCTACAACAATGCAGTGTATCATGGCAGAAATGTGGGGCAC  50
      |||||| ||||||||   |||||||||||||| |||||||||||||||||
seq2  TGCTTT-GGTCTACA--CATGCAGTGTATCAT-GCAGAAATGTGGGGCAC  46

seq1  AGTGAGCTGAGCACACTCTCAATGCACTAACATCGTCCCACTAGGCTCCA  100
      |||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  AGTGAGCTGAGCACACTCTCAATGCACT-ACATCGTCCCACTAGGCT-CA  94

seq1  CTTCCCAATATCACAGGAAAACAGAGACCATGCTTTCAACACAGAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAATATCACAGGAAAACAGAGACCATGCTTTCAACACAGAGAATT  144

seq1  TTGGGGGACATTCAAGATATAGACTATAGCTGCTTTTACCATAGAACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGACATTCAAGATATAGACTATAGCTGCTTTTACCATAGAACACA  194

seq1  CGAGAGTTCAAAGTTCTCTTCTGCTTTGCCATAAAAAGCAGTATGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGTTCAAAGTTCTCTTCTGCTTTGCCATAAAAAGCAGTATGTTAAT  244

seq1  TTATATTCTTACTGTGGCAATATATGTGTATGCATATGTATATGTATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCTTACTGTGGCAATATATGTGTATGCATATGTATATGTATATG  294

seq1  TGTATGTATGTATGTGTATGTATGTATGTGTATGTACATGTGTGTATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATGTATGTGTATGTATGTATGTGTATGTACATGTGTGTATGTA  344

seq1  TGTGCATATATGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATATATGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  394

seq1  TGTGTGTGTAATTTTTTGCTATGTAGCACTCATCGTTTCCCCTTTTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTAATTTTTTGCTATGTAGCACTCATCGTTTCCCCTTTTCTTA  444

seq1  AACCCTGGTTAGCACTCCTCTGTTTTCTGTCCAAGAGTTGCCTTCCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGGTTAGCACTCCTCTGTTTTCTGTCCAAGAGTTGCCTTCCTTAC  494

seq1  CTTTCCATGTAGGAAAGCCTGAGTTACTGCTAAACAGGCACAGGTCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATGTAGGAAAGCCTGAGTTACTGCTAAACAGGCACAGGTCCCAC  544

seq1  CTTCCTCTGTACAAGACTCAGTCTGGAGAGTGAGGCTGCTTTGCGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGTACAAGACTCAGTCTGGAGAGTGAGGCTGCTTTGCGAAGCT  594

seq1  GTTCTTGATGGGTGGTGCTGGAGTATTCAGATGGAAGGTAGAGTCTAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGATGGGTGGTGCTGGAGTATTCAGATGGAAGGTAGAGTCTAGTG  644

seq1  ACGACTTTTAATAACTTTACTCCCCATACACTTCAACTCTCTGATGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTTTTAATAACTTTACTCCCCATACACTTCAACTCTCTGATGGATT  694

seq1  GTGACCTGCAAAGTCAGAGCATGAAGATGCTGGAAGCCGGAAAGGAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTGCAAAGTCAGAGCATGAAGATGCTGGAAGCCGGAAAGGAGAAG  744

seq1  GCAGCAGGCATGGGCACTCCTACGAGGTCGGAAGACAGCATCTGACCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGCATGGGCACTCCTACGAGGTCGGAAGACAGCATCTGACCACA  794

seq1  GCAGGGAACATTCTGTTTCTGAGTTCTCCATCATATGATCACAACTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAACATTCTGTTTCTGAGTTCTCCATCATATGATCACAACTTCCC  844

seq1  AAATGGATCAGGTTGCTTAGAAAGTTCAGCAGTAGTCTAAAGAAATTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATCAGGTTGCTTAGAAAGTTCAGCAGTAGTCTAAAGAAATTGAA  894

seq1  AACCTGGTCCAGTCCCCAGAACCTCACAGTATTTTATTTCCGATTCTGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTCCAGTCCCCAGAACCTCACAGTATTTTATTTCCGATTCTGTC  944

seq1  CTTGGGGTGGGGGGTGGGGGAGGGGAATGACACTGAGAACCTCTGTAGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGTGGGGGGTGGGGGAGGGGAATGACACTGAGAACCTCTGTAGGG  994

seq1  CACTGCAGCCCACAAGAACATGTAGAAGTGAATTC  1035
      |||||||||||||||||||||||||||||||||||
seq2  CACTGCAGCCCACAAGAACATGTAGAAGTGAATTC  1029