MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-273M08
Chromosome	13 (Build37)
Map Location	114,539,113 - 114,540,026
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ppap2a, LOC100041282, Skiv2l2, Dhx29, LOC667756, Ccnu, EG622408, EG622422, 2310016C16Rik, Cdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888, Snag1, Hspb3
Downstream gene	EG632832, LOC622701, LOC100040927, Arl15, A430090L17Rik, Ndufs4, LOC100040958, Fst, 4930467J12Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ppap2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19012 MGI:108412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041282 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Skiv2l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72198 MGI:1919448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218629 MGI:2145374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667756 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Ccnu (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218630 MGI:2145534
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622408 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622408 MGI:3648807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622422 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622422 MGI:3648570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	2310016C16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69590 MGI:1916840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdc20b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238896 MGI:3644472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	Gzma (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14938 MGI:109266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700084D21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76720 MGI:1923970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Gzmk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14945 MGI:1298232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Esm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71690 MGI:1918940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC067074 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:408066 MGI:3040697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 1 Protein

name	LOC100040888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Snag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170625 MGI:2137642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56534 MGI:1928479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG632832 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632832 MGI:3645125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC622701 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622701
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins pseudo : _no_value

name	LOC100040927 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Arl15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218639 MGI:2442308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A430090L17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319803 MGI:2442754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufs4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17993 MGI:1343135
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040958 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Fst (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14313 MGI:95586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930467J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74909 MGI:1922159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Ppap2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369083 GeneID:19012 MGI:108412
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidic acid phosphatase 2a transcript_id : NM_008247.2

name	Ppap2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679430 GeneID:19012 MGI:108412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidic acid phosphatase 2a transcript_id : NM_008903.1

name	LOC100041282 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264710 GeneID:100041282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100041282 transcript_id : XM_001476792.1

name	Skiv2l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130428 GeneID:72198 MGI:1919448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : superkiller viralicidic activity 2-like 2 (S. cerevisiae) transcript_id : NM_028151.2

name	Dhx29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46852275 GeneID:218629 MGI:2145374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 29 transcript_id : NM_172594.2

name	Ccnu (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486693 GeneID:218630 MGI:2145534
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin U transcript_id : NM_001081062.1

name	EG622408 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343766 GeneID:622408 MGI:3648807
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622408 transcript_id : NM_001037914.2

name	EG622422 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395668 GeneID:622422 MGI:3648570
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG622422 transcript_id : XM_897087.2

name	2310016C16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368412 GeneID:69590 MGI:1916840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310016C16 gene transcript_id : NM_027127.2

name	Cdc20b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395670 GeneID:238896 MGI:3644472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : cell division cycle 20 homolog B (S. cerevisiae) transcript_id : XM_138861.5

name	Gzma (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553598 GeneID:14938 MGI:109266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : granzyme A transcript_id : NM_010370.2

name	1700084D21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395672 GeneID:76720 MGI:1923970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700084D21 gene transcript_id : XM_001000188.1

name	Gzmk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680142 GeneID:14945 MGI:1298232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : granzyme K transcript_id : NM_008196.1

name	Esm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328304 GeneID:71690 MGI:1918940
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelial cell-specific molecule 1 transcript_id : NM_023612.3

name	Snag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91598595 GeneID:170625 MGI:2137642
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin associated golgi protein 1 transcript_id : NM_130796.2

name	Hspb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910271 GeneID:56534 MGI:1928479
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 3 transcript_id : NM_019960.1

name	EG632832 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395675 GeneID:632832 MGI:3645125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG632832 transcript_id : XM_907084.2

name	Arl15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351027 GeneID:218639 MGI:2442308
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 15 transcript_id : NM_172595.2

name	A430090L17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371350 GeneID:319803 MGI:2442754
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A430090L17 gene transcript_id : NM_177004.3

name	Ndufs4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754813 GeneID:17993 MGI:1343135
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) Fe-S protein 4 transcript_id : NM_010887.1

name	Fst (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517700 GeneID:14313 MGI:95586
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : follistatin transcript_id : NM_008046.2

name	4930467J12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149264712 GeneID:74909 MGI:1922159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930467J12 gene transcript_id : XM_001477100.1

name	Ppap2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45592928 CCDS:CCDS26776.1 GeneID:19012 MGI:108412
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008195 - phosphatidate phosphatase activity [Evidence ISS] [Evidence TAS] [Evidence IDA] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence ISS]; GO:0006672 - ceramide metabolism [Evidence TAS]; GO:0006651 - diacylglycerol biosynthesis [Evidence TAS]; GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0046839 - phospholipid dephosphorylation [Evidence ISS]; GO:0006470 - protein amino acid dephosphorylation [Evidence TAS] [Evidence IDA]; GO:0007205 - protein kinase C activation [Evidence ISS]; GO:0019216 - regulation of lipid metabolism [Evidence ISS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0006670 - sphingosine metabolism [Evidence TAS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; lipid phosphate phosphatase 1; hydrogen peroxide inducible protein 53 product : phosphatidic acid phosphatase 2a isoform 1 protein_id : NP_032273.1

name	Ppap2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679431 CCDS:CCDS26777.1 GeneID:19012 MGI:108412
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008195 - phosphatidate phosphatase activity [Evidence ISS] [Evidence TAS] [Evidence IDA] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence ISS]; GO:0006672 - ceramide metabolism [Evidence TAS]; GO:0006651 - diacylglycerol biosynthesis [Evidence TAS]; GO:0008285 - negative regulation of cell proliferation [Evidence ISS]; GO:0046839 - phospholipid dephosphorylation [Evidence ISS]; GO:0006470 - protein amino acid dephosphorylation [Evidence TAS] [Evidence IDA]; GO:0007205 - protein kinase C activation [Evidence ISS]; GO:0019216 - regulation of lipid metabolism [Evidence ISS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0006670 - sphingosine metabolism [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; lipid phosphate phosphatase 1; hydrogen peroxide inducible protein 53 product : phosphatidic acid phosphatase 2a isoform 2 protein_id : NP_032929.1

name	LOC100041282 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264711 GeneID:100041282
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476842.1

name	Skiv2l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312352 CCDS:CCDS26778.1 GeneID:72198 MGI:1919448
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : superkiller viralicidic activity 2-like 2 protein_id : NP_082427.1

name	Dhx29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46852276 CCDS:CCDS26779.1 GeneID:218629 MGI:2145374
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : nucleic acid helicase DDXx product : DEAH (Asp-Glu-Ala-His) box polypeptide 29 protein_id : NP_766182.2

name	Ccnu (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486694 GeneID:218630 MGI:2145534
definition	codon_start : 1 product : uracil DNA glycosylase 2 protein_id : NP_001074531.1

name	EG622408 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702306 GeneID:622408 MGI:3648807
definition	codon_start : 1 product : hypothetical protein LOC622408 protein_id : NP_001033003.1

name	EG622422 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395669 GeneID:622422 MGI:3648570
definition	codon_start : 1 product : similar to CDC20-like protein protein_id : XP_902180.2

name	2310016C16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312336 CCDS:CCDS26781.1 GeneID:69590 MGI:1916840
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69590 protein_id : NP_081403.1

name	Cdc20b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395671 GeneID:238896 MGI:3644472
definition	codon_start : 1 product : similar to CDC20-like protein form 2 protein_id : XP_138861.5

name	Gzma (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754102 CCDS:CCDS26782.1 GeneID:14938 MGI:109266
definition	GO_component : GO:0001772 - immunological synapse [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0004277 - granzyme A activity [Evidence IEA] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS] [Evidence IEA]; GO:0006922 - cleavage of lamin [Evidence ISS]; GO:0019835 - cytolysis [Evidence IEA]; GO:0006955 - immune response [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : BLT esterase; Hanukah factor; serine esterase 1 product : granzyme A protein_id : NP_034500.1

name	1700084D21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395673 GeneID:76720 MGI:1923970
definition	codon_start : 1 product : hypothetical protein LOC76720 protein_id : XP_001000188.1

name	Gzmk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680143 CCDS:CCDS26783.1 GeneID:14945 MGI:1298232
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : granzyme K protein_id : NP_032222.1

name	Esm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14196342 CCDS:CCDS26784.1 GeneID:71690 MGI:1918940
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005520 - insulin-like growth factor binding [Evidence IEA] GO_process : GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 product : endothelial cell-specific molecule 1 protein_id : NP_076101.1

name	Snag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91598596 GeneID:170625 MGI:2137642
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sorting nexin associated golgi protein 1 protein_id : NP_570614.2

name	Hspb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910272 CCDS:CCDS26785.1 GeneID:56534 MGI:1928479
definition	GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : small heat shock protein B3; heat shock 27kD protein 3 product : heat shock protein 3 protein_id : NP_064344.1

name	EG632832 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82952610 GeneID:632832 MGI:3645125
definition	codon_start : 1 product : similar to Gpbp1l1 protein protein_id : XP_912177.1

name	Arl15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369856 GeneID:218639 MGI:2442308
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : ADP-ribosylation factor related protein 2 protein_id : NP_766183.1

name	A430090L17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892861 GeneID:319803 MGI:2442754
definition	codon_start : 1 product : hypothetical protein LOC319803 protein_id : NP_795978.1

name	Ndufs4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754814 GeneID:17993 MGI:1343135
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005747 - respiratory chain complex I (sensu Eukaryota) [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IDA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NADH or NADPH [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18 kDa) product : NADH dehydrogenase (ubiquinone) Fe-S protein 4 protein_id : NP_035017.1

name	Fst (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679867 GeneID:14313 MGI:95586
definition	GO_process : GO:0030509 - BMP signaling pathway [Evidence IGI]; GO:0008585 - female gonad development [Evidence IMP]; GO:0007276 - gametogenesis [Evidence IGI]; GO:0045596 - negative regulation of cell differentiation [Evidence IGI] [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP] codon_start : 1 product : follistatin protein_id : NP_032072.1

name	4930467J12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149264713 GeneID:74909 MGI:1922159
definition	codon_start : 1 product : hypothetical protein LOC74909 protein_id : XP_001477150.1

name	LOC667756 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667756
definition	number : 1 pseudo : _no_value

name	LOC100040888 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040888
definition	number : 1 pseudo : _no_value

name	LOC100040927 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040927
definition	number : 1 pseudo : _no_value

name	LOC100040958 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040958
definition	number : 1 pseudo : _no_value

name	BC067074 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94395674 GeneID:408066 MGI:3040697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 1 Protein product : cDNA sequence BC067074 transcript_id : XR_001629.1

name	LOC622701 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264692 GeneID:622701
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to GC-rich promoter binding protein 1-like 1 pseudo : _no_value transcript_id : XR_032275.1

clone name	MSMg01-340N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304N07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-445A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348P10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010H03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-273M08.b	B6Ng01-273M08.g
ACC	GA075257	GA075258
length	918	1,153
definition	B6Ng01-273M08.b	B6Ng01-273M08.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcttttaatgtgattattcccagtttcatccattcacctgcaaatg gcatgactgcattctttatggaaaaaagattccactatacatcttaaagt agcattacactatagtagcattatattagagtagtattataaatagatac tgcattctgcttatccatcttctgttgttcattacctgggttggttccgt agttagatattgtaaatactgctacaataagcactgatgtacaagcatct ctgtgacatgtggggtttgagtcttttgaataaatactaaattgtgctat atattggtcatgtggaaaatctattttcagactttttttttgaaaggttc tacattttatcactggacaaactacacctccaatttagacttgagcaagt ctccaggttaaaaatgttaaactgcatctggtagaactgattgatgatga taattcagtttaaaccttcagtcttgccactgtgtgaatccttacagacc cagcttcgttctcctatgctgtcttctcttagagttgtacctgattttgt taccagttttaatctgaatccatgaggagtaggacgattttactcttgtt tttggtccaggaatcactttggttctgaaagtcttgtgagaagacgaggc gagattcggaatcaggtgcagactgcacgatgctggagaaaaagaggagc catttttagactttttttttttttaaagaaacctttaactggtttccata ttggtttaactggccttgattatgttccccagcaattcacgagttttctt tagtgcatggatttatcaggcatgcctttttcaggcattgtggctgtgag taaatgggtcctcccctgcaattttgatttgcattcctcaaatagcaatg aggttgggtgtgtttgtg	gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacacc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggctgttcctca gaaaattggacatagtactaccggaggatccagcaatatctctcctgggc atatatccagaagatgttccaaccagtaagaaggacacatgctccactat gttcatagcagccttatttttaatagccaaaagctggaaagaacccagat gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcttaggcaa atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa agaactcaaatgatatgtactcaatgataagtggatatcagcccagaaac ttagtatacccgagatataagatacaagttgcaaaacacatgaaactgaa gaagaatgaagaccaaagtgtggacactttgccccttcttagaattggga acaaaacacccatggaaggagttacagagacaaagtttggagctgagaca aaaggatggaccatctagagactgccatatccagagatccatcccataat cagcctccaaatgctgacaccattgcatacactagcaagattttgctgaa aggaccctgatatagctgtcacttgtgagactatgccggggcctagcaaa cacagaagtggatgctcacagtcagctattggatggatcacaagggtccc caatgggagagttggagaaagtatccaaggagctaaagggatctgcacct ataggtgacacattatgactacagtacccggagctcttgactctagctgc atatgtatcaaaggatgctagtcgcatcactgcaagagagccatgaactg caacataatgcctagtacaggtacgcctgagccaaaatggaaattggatg tgt
quality values	Open. Hide. 47 29 26 26 54 62 54 62 62 36 35 32 31 25 31 45 39 47 47 56 62 62 62 56 44 37 56 51 56 62 44 43 62 59 59 25 59 56 46 46 56 59 62 62 59 59 62 62 62 62 59 56 59 62 62 59 59 62 62 62 59 59 62 62 62 62 59 62 62 62 54 54 56 56 56 62 62 62 62 59 59 59 46 46 49 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 54 42 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 50 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 59 62 56 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 47 54 56 62 62 44 56 56 32 56 51 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 56 56 56 51 56 62 62 62 62 62 62 56 62 47 62 56 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 52 62 45 54 54 62 47 62 62 62 52 62 62 62 62 62 62 62 54 62 46 54 62 47 52 62 62 62 58 58 58 58 58 54 54 58 54 54 54 58 46 58 58 45 37 52 58 43 48 54 41 58 58 41 35 58 40 58 58 54 54 54 54 58 58 54 54 29 58 52 52 52 54 28 26 54 58 37 50 54 58 54 41 41 52 52 45 54 15 36 54 41 54 51 46 41 58 52 49 49 46 51 49 54 58 42 58 58 50 58 54 50 41 33 35 58 20 49 50 33 46 39 41 39 52 47 35 31 58 32 37 52 20 12 25 48 47 39 40 24 49 40 52 53 45 33 36 39 47 33 53 53 52 53 58 53 33 54 58 52 51 51 19 50 19 51 49 23 50 52 28 35 51 49 50 22 32 32 49 31 32 54 54 51 54 53 53 49 47 49 49 53 45 41 49 25 17 26 31 32 28 51 51 54 39 51 39 42 35 54 49 28 54 52 53 40 40 34 40 53 40 42 33 27 40 32 53 29 32 41 45 45 25 34 25 33 37 45 33 53 25 20 31 32 32 45 51 52 32 27 26 39 24 18 28 31 32 21 34 20 53 18 53 47 47 29 53 31 52 47 34 26 23 42 25 15 18 38 27 26 15 51 51 38 39 36 20 9 9 23 12 26 41 31 20 16 51 51 51 32 31 28 26 41 17 33 28 21 31 26 46 9 21 30 42 20 18 31 27 34 31 42 41 32 35 48 32 13 16 8 24 32 42 37 35 30 43 26 6 20 33 46 46 31 31 25 24 46 34 30 32 27 33 18 32 24 13 8 8 31 27 9 11 12 32 22 13 22 31 15 19 29 9 13 29 31 25 9 36 11 22 22 22 18 12 8 10	Open. Hide. 62 44 32 47 62 62 59 59 59 59 15 15 12 10 7 18 16 18 17 34 34 62 56 62 62 62 62 62 59 62 62 59 49 59 62 56 62 62 59 62 62 54 54 62 62 62 54 54 59 62 62 54 54 59 11 18 13 18 25 18 28 34 62 62 62 59 59 62 59 59 59 62 54 33 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 59 62 49 59 62 59 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 56 43 46 46 56 62 62 56 62 62 56 51 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 43 56 56 62 56 46 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 54 58 58 58 58 58 58 54 54 54 54 58 58 58 58 58 54 58 58 58 45 41 58 58 58 54 54 41 58 58 54 58 58 58 54 58 58 58 58 58 58 54 58 58 58 40 58 54 58 58 52 54 58 58 58 58 58 54 58 58 58 58 58 53 58 54 54 58 58 51 54 58 58 58 45 51 51 58 58 52 58 58 58 54 47 58 54 58 46 50 58 58 51 58 58 58 45 33 53 51 52 53 53 58 58 58 51 53 58 58 51 47 58 51 51 52 52 53 53 42 58 58 58 58 58 46 58 40 49 52 58 58 53 58 40 52 53 52 58 41 58 58 54 53 50 58 58 51 52 52 51 39 41 58 49 49 58 50 49 58 58 39 29 49 58 37 58 32 47 58 54 54 30 52 32 49 40 58 50 52 42 53 37 54 44 41 32 33 46 53 54 34 47 50 49 26 33 42 44 44 52 42 45 31 49 37 37 32 51 32 28 32 54 39 29 54 54 42 45 45 45 54 53 40 37 51 54 47 30 14 54 35 32 54 37 27 40 31 45 54 30 28 31 45 54 51 31 53 54 54 54 40 54 26 52 52 32 46 18 34 29 32 49 49 47 25 52 32 33 31 28 40 32 40 43 40 53 31 31 32 52 34 33 26 37 53 34 32 31 32 32 32 31 31 27 30 51 20 28 31 32 43 26 45 33 51 29 25 31 31 39 39 31 30 31 32 45 33 23 30 28 40 25 27 40 28 31 30 31 16 27 31 43 31 38 31 31 31 28 32 31 31 29 37 32 37 22 31 30 42 31 22 18 48 46 27 32 29 42 31 41 48 23 14 15 30 23 46 31 30 30 27 32 29 29 30 30 35 31 31 32 31 22 32 32 31 34 33 31 39 18 37 27 38 31 31 31 20 26 26 48 48 35 18 30 23 32 13 29 33 44 23 21 27 37 26 24 34 36 21 31 31 21 18 18 37 31 27 32 24 31 33 14 14 32 31 26 32 34 31 25 21 15 26 6 7 25 12 31 32 24 23 21 14 11 30 48 26 15 32 48 43 24 9 19 10 8 36 10 12 9 4 10 22 14 10 10 31 17 17 37 24 6 11 15 14 13 21 10 12 15 6 28 16 28 28 15 30 15 17 40 15 9 16 27 27 27 21 22 12 14 5 11 19 17 26 27 10 12 3 5 27 6 7 27 22 15 17 12 24 5 9 10 3 5 17 24 16 21 17 21 10 8 25 9 21 19 21 10 23 23 23 20 16 9 6 15 10 23 19 23 20 16 8 4 7 13 6 6 10 6 16 29 25 5 5 25 8 3 3 3 11 4 3 3 3 3 3 17 10 8 7 6 9 11 15 10 5 22 9 12 8 3 7 5 5 3 2 5 7 4 6 7 3 5 5 1 4 1 1 10 4 2 3 2 5 7 16 6 5 4 3 3 2 11 4 7 4 3 2 4 11 4 17 6 4 8 29 9 2 1 12 5 20 12 7 7 7 3 2 1 6 4 3 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_114539113_114540026
seq2: B6Ng01-273M08.b_46_963 (reverse)

seq1  CACAAACACACCCAACCTCATTGCTATTTGAGGAATGCAAATCAAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACACCCAACCTCATTGCTATTTGAGGAATGCAAATCAAAATTG  50

seq1  CAGGG--AGACCCATTTACTCACAGCCACAATGCCTGAAAAAGGCATG-C  97
      |||||   |||||||||||||||||||||||||||||||||||||||| |
seq2  CAGGGGAGGACCCATTTACTCACAGCCACAATGCCTGAAAAAGGCATGCC  100

seq1  TGATAAATCCATGCACTAAAGAAAACTCGTGAATTGCTGGGGAACATAAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATCCATGCACTAAAGAAAACTCGTGAATTGCTGGGGAACATAAT  150

seq1  CAAGGCCAGTTAAACCAATATGGAAACCAGTTAAAGGTTTCTTTAAAAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCAGTTAAACCAATATGGAAACCAGTTAAAGGTTTCTTTAAAAAA  200

seq1  AAAAAAAGTCTAAAAATGGCTCCTCTTTTTCTCCAGCATCGTGCAGTCTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTCTAAAAATGGCTCCTCTTTTTCTCCAGCATCGTGCAGTCTG  250

seq1  CACCTGATTCCGAATCTCGCCTCGTCTTCTCACAAGACTTTCAGAACC-A  296
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACCTGATTCCGAATCTCGCCTCGTCTTCTCACAAGACTTTCAGAACCAA  300

seq1  AGTGATTCCTGGACCAAAAACAAGAGTAAAATCGTCCTACTCCTCATGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTCCTGGACCAAAAACAAGAGTAAAATCGTCCTACTCCTCATGGA  350

seq1  TTCAGATTAAAACTGGTAACAAAATCAGGTACAACTCTAAGAGAAGACAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTAAAACTGGTAACAAAATCAGGTACAACTCTAAGAGAAGACAG  400

seq1  CATAGGAGAACGAAGCTGGGTCTGTAAGGATTCACACAGTGGCAAGACTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAGAACGAAGCTGGGTCTGTAAGGATTCACACAGTGGCAAGACTG  450

seq1  AAGGTTTAAACTGAATTATCATCATCAATCAGTTCTACCAGATGCAGTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTAAACTGAATTATCATCATCAATCAGTTCTACCAGATGCAGTTT  500

seq1  AACATTTTTAACCTGGAGACTTGCTCAAGTCTAAATTGGAGGTGTAGTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTAACCTGGAGACTTGCTCAAGTCTAAATTGGAGGTGTAGTTT  550

seq1  GTCCAGTGATAAAATGTAGAACCTTTCAAAAAAAAAGTCTGAAAATAGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTGATAAAATGTAGAACCTTTCAAAAAAAAAGTCTGAAAATAGAT  600

seq1  TTTCCACATGACCAATATATAGCACAATTTAGTATTTATTCAAAAGACTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACATGACCAATATATAGCACAATTTAGTATTTATTCAAAAGACTC  650

seq1  AAACCCCACATGTCACAGAGATGCTTGTACATCAGTGCTTATTGTAGCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCACATGTCACAGAGATGCTTGTACATCAGTGCTTATTGTAGCAG  700

seq1  TATTTACAATATCTAACTACGGAACCAACCCAGGTAATGAACAACAGAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACAATATCTAACTACGGAACCAACCCAGGTAATGAACAACAGAAG  750

seq1  ATGGATAAGCAGAATGCAGTATCTATTTATAATACTACTCTAATATAATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAAGCAGAATGCAGTATCTATTTATAATACTACTCTAATATAATG  800

seq1  CTACTATAGTGTAATGCTACTTTAAGATGTATAGTGGAATCTTTTTTCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATAGTGTAATGCTACTTTAAGATGTATAGTGGAATCTTTTTTCCA  850

seq1  TAAAGAATGCAGTCATGCCATTTGCAGGTGAATGGATGAAACTGGGAATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATGCAGTCATGCCATTTGCAGGTGAATGGATGAAACTGGGAATA  900

seq1  ATCACATTAAAAGAATTC  914
      ||||||||||||||||||
seq2  ATCACATTAAAAGAATTC  918

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information