BAC Information

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BAC

Clone NameB6Ng01-274O03
Chromosome13 (Build37)
Map Location 95,662,196 - 95,663,254
singlet/doubletsinglet
Overlap genenone
Upstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1, Tbca, Otp
Downstream geneWdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274O03.bB6Ng01-274O03.g
ACCGA076068GA076069
length1,058828
definitionB6Ng01-274O03.b B6Ng01-274O03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagggtcttatgtttagatctatatagtctgttttggttgtt
tttgtaaatcatcactaaatattctactatcttctaaaatatggaaactt
taactagatctagcctctaaagtagatcagggcaagacattatgggtcag
ttttgaactaattttgataatgttttatagtttattgtgcatgtatattt
aacctagtactgatttgtaagtctgagtgtgtatgtgttaatttgacata
gctagtcatctaggaagagacaacctcattgagaaactgtcttcatcaag
tcactctgtaagcaagcccgtggggcattttctagattgataattgatga
gggagggcccaacccactgtgggcaatgccacccctggacaggtgatcct
gggttatatagaaaagcaattgagagagccatgaggagcacttctataat
gttctttcatggtctctgctttagtttttgactccaggttcctgcttggg
tgtctgtctttgtttccctcaacaatgaactgtgactgggacatgtaagc
caaataaactctctttcctctccaagttggttttgagtcatggtccttat
cacagcaatagaaagcagactgggcaggatatatagggagagagagacag
agacagagacagagagacagagagagagagagagagacagacagacagac
agacagagacacagagagagtcacacagagacagagagacagagagagac
agacagagagaatatgactttgaactgcatgataaacaaggtgaaaaaaa
gtcactcctacaggaagtttcatgtttccattttcacacaaagagatcat
ccatgggcttgtggtgagcacagtactcaaataaaccagtcaccatggga
ggataattacctttccaaaggactgggggaccatgtagtatcttcaaaaa
gtaatttagtaatggcgcccttggaatgttggaagagttaatatgccact
cttggaaacctcaatgactagatgttcctcacaatagaagggaggaagct
cacacttg
gaattcagaatggaacctgggagacttgggctgtctgaggtcaagttcag
cccaagttcactggtcagtccaccacgaccagttcactgctgtgagccct
ttccattagacctcctgccctgatgaagacagtcaggaaaccgtgtcctt
acctcttatttgaatcatcagtctctctgatttctctcaaatataatctg
tgggttctgggaattgatgctgcctgcatgctaagtgcatattccaccac
tcacttccactcccgatgccaaggctacgattaattttttttaaatgtat
tctctaaaatatttcatccagtatactttactcatattctttcctcttcc
ccaactcctcctataatctcccccacctccccaatcgtccaacttcatgt
tctctctctctctctctcacagacaaaacaacaacagaacatggagtcca
atttgtgttggccaactacttctaaccatggcttgcccccgagagtgtga
ctgatattctcattcccagtgcactggggggaactaatttttcctttcct
ggcagctatcagttgtgaataccttcctaggaaaggtatttttgtgtcca
caccccgccccccgccctgtgctgacattttgtctggattgagcttgtgt
gggtgttgtacaagatgtcccaggctctgagttcctatgtccatcttcca
gttatgtctggaaggcattctttccttaaagttatctacacctctgactc
ttcagatctctctgcctccttttcagtagagacttgagtcatgagtgtgt
gtgtgtgtgtgtgtgtgtgtgagtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95662196_95663254
seq2: B6Ng01-274O03.b_47_1104

seq1  GAATTCTTCAGGGTCTTATGTTTAGATCTATATAGTCTGTTTTGGTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGGGTCTTATGTTTAGATCTATATAGTCTGTTTTGGTTGTT  50

seq1  TTTGTAAATCATCACTAAATATTCTACTATCTTCTAAAATATGGAAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATCATCACTAAATATTCTACTATCTTCTAAAATATGGAAACTT  100

seq1  TAACTAGATCTAGCCTCTAAAGTAGATCAGGGCAAGACATTATGGGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGATCTAGCCTCTAAAGTAGATCAGGGCAAGACATTATGGGTCAG  150

seq1  TTTTGAACTAATTTTGATAATGTTTTATAGTTTATTGTGCATGTATATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAACTAATTTTGATAATGTTTTATAGTTTATTGTGCATGTATATTT  200

seq1  AACCTAGTACTGATTTGTAAGTCTGAGTGTGTATGTGTTAATTTGACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGTACTGATTTGTAAGTCTGAGTGTGTATGTGTTAATTTGACATA  250

seq1  GCTAGTCATCTAGGAAGAGACAACCTCATTGAGAAACTGTCTTCATCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCATCTAGGAAGAGACAACCTCATTGAGAAACTGTCTTCATCAAG  300

seq1  TCACTCTGTAAGCAAGCCCGTGGGGCATTTTCTAGATTGATAATTGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGTAAGCAAGCCCGTGGGGCATTTTCTAGATTGATAATTGATGA  350

seq1  GGGAGGGCCCAACCCACTGTGGGCAATGCCACCCCTGGACAGGTGATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCCCAACCCACTGTGGGCAATGCCACCCCTGGACAGGTGATCCT  400

seq1  GGGTTATATAGAAAAGCAATTGAGAGAGCCATGAGGAGCACTTCTATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATATAGAAAAGCAATTGAGAGAGCCATGAGGAGCACTTCTATAAT  450

seq1  GTTCTTTCATGGTCTCTGCTTTAGTTTTTGACTCCAGGTTCCTGCTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCATGGTCTCTGCTTTAGTTTTTGACTCCAGGTTCCTGCTTGGG  500

seq1  TGTCTGTCTTTGTTTCCCTCAACAATGAACTGTGACTGGGACATGTAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTTTGTTTCCCTCAACAATGAACTGTGACTGGGACATGTAAGC  550

seq1  CAAATAAACTCTCTTTCCTCTCCAAGTTGGTTTTGAGTCATGGTCCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAACTCTCTTTCCTCTCCAAGTTGGTTTTGAGTCATGGTCCTTAT  600

seq1  CACAGCAATAGAAAGCAGACTGGGCAGGATATATAGGGAGAGAGAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATAGAAAGCAGACTGGGCAGGATATATAGGGAGAGAGAGACAG  650

seq1  AGACAGAGACAGAGAGACAGAGAGAGAGAGAGAGAGACAGACAGACAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGACAGAGAGACAGAGAGAGAGAGAGAGAGACAGACAGACAGAC  700

seq1  AGACAGAGACACAGAGAGAGTCACACAGAGACAGAGAGACAGAGAGAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGACACAGAGAGAGTCACACAGAGACAGAGAGACAGAGAGAGAC  750

seq1  AGACAGAGAGAATATGACTTTGAACTGCATGATAAACAAGGTGAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGAATATGACTTTGAACTGCATGATAAACAAGGTGAAAAAAA  800

seq1  GTCACTCCTACAGGAAGTTTCATGTTTCCATTTTCACACAAAGAGATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCCTACAGGAAGTTTCATGTTTCCATTTTCACACAAAGAGATCAT  850

seq1  CCAT-GGCTTGTGGTGAGCACAGTACTCAAATAAACCAGTCACCCATGGG  899
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCATGGGCTTGTGGTGAGCACAGTACTCAAATAAACCAGTCA-CCATGGG  899

seq1  AGGATAATTACCTTTTCCAAAGGACTGGGGGACCATGTAGTATCTTCAAA  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGATAATTACC-TTTCCAAAGGACTGGGGGACCATGTAGTATCTTCAAA  948

seq1  AAGGTAATTTAGTAAATGGCGCCC-TGGAATGTTGGAAGAGTTAATATGC  998
      || |||||||||| |||||||||| |||||||||||||||||||||||||
seq2  AA-GTAATTTAGT-AATGGCGCCCTTGGAATGTTGGAAGAGTTAATATGC  996

seq1  CACTCTTGGAAACTCCAGTGACTAGATTGTTTCCCACAATAG-AGGGAGG  1047
      |||||||||||||  || |||||||| |||| | |||||||| |||||||
seq2  CACTCTTGGAAACCTCAATGACTAGA-TGTTCCTCACAATAGAAGGGAGG  1045

seq1  -AGCACACACTTG  1059
       ||| ||||||||
seq2  AAGCTCACACTTG  1058