BAC Information

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BAC

Clone NameB6Ng01-275A15
Chromosome13 (Build37)
Map Location 86,714,759 - 86,715,802
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275A15.bB6Ng01-275A15.g
ACCGA076183GA076184
length1,2351,024
definitionB6Ng01-275A15.b B6Ng01-275A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgcctactgctctgagtcccgcatgtcctctagggtgaatcag
gatatggagtcttcatgggaccagatcaagtaagggtcttaattatattt
tttaatcaaaaacaattatttttgtaaattgtattttaatactgactatc
ccttttaatcgctacctagatattccctatctccctattgtttcaacttc
atatcttttttttatgtccttaaaaaagctagcaactaaaaaagataaac
aaataataatacaagcccaacttttgagttcattcagtgtttgccatcta
tatctgggtatggaatcttccctcaagagtaatttttataaccagtgaga
ttcccttgagtgagatttttatttctttgtatgtggttggtaactggaga
aagcacttggctttcaaggatggcttttccttatctctctctcagttctg
attccctatctgctttagatatgtgcttgttttgtgcatgctgccaccat
ctctgtctgttattatgggttcagtttttattgtactgaaagatcctgta
tactttgtgtcatccctccagatcttacaacttgactgcctcctcttctg
cctaattccttattcacgaatggagtgttttgcttaagaaatatcatttg
actgaaaatttcaaggtcctttactctctcaggactgttcaattgttctc
tgtattagttcccacctactgcaggaagaaacttctctgataatgcctgg
attggaaactaatatattggtatagaagaatgtagttagcagtaattttt
tgctacattcctttaacaggccaatagcattttgttttttcataggttca
tgttctatttaatctcactttcttttacctaagcagtgttaggcatgtgt
attgttttatagattgagctttatatccaatcaggaatgtttggatttgt
taattccacaatgtttgtgctaacactgcagcagcttttcagttaatcag
gtcattattattgatccacagggttgtaacagggttattttttcactttt
cttactctggtattgtacagagtcctcttcagccattatgaaagtatttg
agtatgagtgaggactttataagtacacctaggttcaattggtataccca
agaaatgtaattctgtcctcagcatatcgctcagtcctccctcacttgtt
tttatgagccagacaatgccgtggctgactagact

gaattctttttcttttcctttttaaatttggacccttcttgaagtaggaa
taagaaacacagccctgaaaaccaaaggtgattgaaactatacctaagtc
aaatagtcatgaaaatctagaggtcaactctttgttttaaaataatcata
tgtagttttattaatacatattcatttgaacttttatgtatatttatcat
tattttagtgtataaaactagcatatcaaacaagaaaaaagtctagcaat
tagtttcaaatctcagatatcattataatatactacttctcaccagatct
tcatagtattcttcacagtactgttgcagtttttaaggaataatgtgaca
tacttatgaatcattatacaaatggttccatggtgggtttatgcatagac
cttcataaaagtaatattcattgcaaaaacacttcctctaggttttcttt
tagagaatgttaagacttactataaagtgagggaaggtcctatttgccat
taataatttcataagtccttatctgaaatctaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaagagctagtatcattgacgctaaagaagcaataatgatac
agaatcaatcccagagccattgctgccttttattctcatcagctttgttc
aagcttagggataattgaagcttatatatgatgctagggaggatgacaat
attcacaatattgatcctacattcccaaaaagattgaatgattttctatc
ttccgttatcttgttcagtcttcttacttcaagttgtaaaattttgatag
tggtgagtcctatgatatatagtgcaagagagatttatttatcttttttc
ttttttaatacatattttcctcatacaatttccaatgctatccagagtcc
cgcaataccctgcccccccacccccacctatcgattttcgccctgcatcc
cctgtaactgggaatttaaggtgcttcatggcctctcctttcatgatgcc
tgactaggtctacttttgatacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86714759_86715802
seq2: B6Ng01-275A15.g_63_1086

seq1  GAATTCTTTTTCTTTTCCTTTTTAAATTTGGACCCTTCTTGAAGTAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTCTTTTCCTTTTTAAATTTGGACCCTTCTTGAAGTAGGAA  50

seq1  TAAGAAACACAGCCCTGAAAACCAAAGGTGATTGAAACTATACCTAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACACAGCCCTGAAAACCAAAGGTGATTGAAACTATACCTAAGTC  100

seq1  AAATAGTCATGAAAATCTAGAGGTCAACTCTTTGTTTTAAAATAATCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCATGAAAATCTAGAGGTCAACTCTTTGTTTTAAAATAATCATA  150

seq1  TGTAGTTTTATTAATACATATTCATTTGAACTTTTATGTATATTTATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTATTAATACATATTCATTTGAACTTTTATGTATATTTATCAT  200

seq1  TATTTTAGTGTATAAAACTAGCATATCAAACAAGAAAAAAGTCTAGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTGTATAAAACTAGCATATCAAACAAGAAAAAAGTCTAGCAAT  250

seq1  TAGTTTCAAATCTCAGATATCATTATAATATACTACTTCTCACCAGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCAAATCTCAGATATCATTATAATATACTACTTCTCACCAGATCT  300

seq1  TCATAGTATTCTTCACAGTACTGTTGCAGTTTTTAAGGAATAATGTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTATTCTTCACAGTACTGTTGCAGTTTTTAAGGAATAATGTGACA  350

seq1  TACTTATGAATCATTATACAAATGGTTCCATGGTGGGTTTATGCATAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATGAATCATTATACAAATGGTTCCATGGTGGGTTTATGCATAGAC  400

seq1  CTTCATAAAAGTAATATTCATTGCAAAAACACTTCCTCTAGGTTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAAAGTAATATTCATTGCAAAAACACTTCCTCTAGGTTTTCTTT  450

seq1  TAGAGAATGTTAAGACTTACTATAAAGTGAGGGAAGGTCCTATTTGCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATGTTAAGACTTACTATAAAGTGAGGGAAGGTCCTATTTGCCAT  500

seq1  TAATAATTTCATAAGTCCTTATCTGAAATCTAAAAAAAAAAAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTCATAAGTCCTTATCTGAAATCTAAAAAAAAAAAAAAAAAAA  550

seq1  AAAAAAAAAAAGAGCTAGTATCATTGACGCTAAAGAAGCAATAATGATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAGCTAGTATCATTGACGCTAAAGAAGCAATAATGATAC  600

seq1  AGAATCAATCCCAGAGCCATTGCTGCCTTTTATTCTCATCAGCTTTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAATCCCAGAGCCATTGCTGCCTTTTATTCTCATCAGCTTTGTTC  650

seq1  AAGCTTAGGGATAATTGAAGCTTATATATGATGCTAGGGAGGATGACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAGGGATAATTGAAGCTTATATATGATGCTAGGGAGGATGACAAT  700

seq1  ATTCACAATATTGATCCTACATTCCCAAAAAGATTGAATGATTTTCTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAATATTGATCCTACATTCCCAAAAAGATTGAATGATTTTCTATC  750

seq1  TTCCGTTATCTTGTTCAGTC-TCTTACTTCAAAGTTGTAAAATTTTGATA  799
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TTCCGTTATCTTGTTCAGTCTTCTTACTTC-AAGTTGTAAAATTTTGATA  799

seq1  GT-GTGAGTCCTATGATATATTAGTGCAAGAGAGATTTATTTTATTCTTT  848
      || ||||||||||||||||| |||||||||||||||||||||   |||||
seq2  GTGGTGAGTCCTATGATATA-TAGTGCAAGAGAGATTTATTT--ATCTTT  846

seq1  TTTTCTTTTTTTTATTACATATTTTCCTCAATTAC-ATTTCCAATGCTAT  897
      ||   | ||||||| |||||||||||||||  ||| ||||||||||||||
seq2  TT---TCTTTTTTAATACATATTTTCCTCA--TACAATTTCCAATGCTAT  891

seq1  CCCAGAAGTCCCGC-ATACCCTTGCCCCCCA-CCCCACCTATTCCGATTT  945
       |||| |||||||| |||||||  ||||||| ||||||||||  |||  |
seq2  -CCAG-AGTCCCGCAATACCCTGCCCCCCCACCCCCACCTAT--CGA--T  935

seq1  TTTGGCCCTGGCATTCCCCTGTACTGGGGAATATAAAGTTTGCCTGTCCA  995
      ||| ||||| ||| |||||||||   |||||| ||| |  |||   | ||
seq2  TTTCGCCCT-GCA-TCCCCTGTAACTGGGAATTTAAGG--TGC---TTCA  978

seq1  ATGGGCCTCTCTTTTCAGTGATGGCTGACTAGGTCATCTTTTGATACAT  1044
         |||||||| ||||| ||||| |||||||||||  ||||||||||||
seq2  --TGGCCTCTCCTTTCA-TGATGCCTGACTAGGTCTACTTTTGATACAT  1024


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