BAC Information

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BAC

Clone NameB6Ng01-277L21
Chromosome13 (Build37)
Map Location 37,235,110 - 37,236,252
singlet/doubletsinglet
Overlap genenone
Upstream geneFars2, LOC100041590, LOC666758, Nrn1, F13a1
Downstream geneLy86, LOC100042794, LOC100042800, LOC100042802, LOC100041624, Rreb1, Ssr1, Cage1, Riok1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277L21.bB6Ng01-277L21.g
ACCGA078177GA078178
length1,1801,144
definitionB6Ng01-277L21.b B6Ng01-277L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttcctttagttagagtcacgccgagatattttatatta
tttgtgactattgagaagggtgtgtttcctaatttctttctcagcctgtt
tattctttgtgtagagaaagccatgacttgttgagtaaattatatcagct
acttcacggaagctgtttatcagtttaggagttcctctgggtgggacttt
taaggtcactaataatatactatcaattcatctggcaaagatgaattttg
gacttcctccttaccaagttggtatacccg
gaattcaaaggatactttcacaaactagacaacagaaaccattaagtttg
gaatactctgagacagtcttaagggttagaaaagccaatagccaaaggga
ctaccgtgtactatgtgaggaacaatttccagaagtgagagtagacaagg
gccacagagaacattgtgaaaacctgcatttttaggtgtaatttatacca
tgtaagctctccagaataggtgactttctttagggctgtttcctgaccaa
gtggctggcagacccattaaatgaactatttatttgtttgtttgcttgct
tgcttccttgcttgcctagtgcatgtatgtataccatgtgaatacagtgc
ggatgttctatagtctgcctgtagaggtcagagaacagccctgggtactg
gtacagggtacattctgcttctggggatgttctgtctccgtgtttcattt
ccccataagcgaactgggattacagaccctacatgagtatggcttttaca
cgggtttgggagaaaactgaacccagaaagatcattatgcaaacagctaa
tgtaagcacccttacccactgagctctttccagctctggatttttatgag
tgaggatatggtatgcctttgttcttttccaggaagcctccagatagata
gtaataatatgacctgatcagtttagagtgtcctgctcctacctagggct
agagacaggactcagatctcattctgttcaccagtcttcaaagccttgca
gctttggctttcaccgttaaatgcagctggctgtgaggagtggatccatc
cttgccttctcttgactaccctcctaacacagtcatttgacctgtcattt
catgaccttgtgcctttgtcaaagaccaacaggcagagatacccaacagc
ccctgggcctttatttcaacatggcccccattgcttgaccgacttgaatg
gatccatccacccacctcttctggcctgggtactgtcttgcagctttggt
cttgctcatctcccatctccatagtgctgcagcttgccttgacagtacta
acttctgcatctgggctctactgaatgcctctgcttagccttgcctcaag
cagctctcgactgggcctaaataaattcctaggtaaccacctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37235110_37236252
seq2: B6Ng01-277L21.g_65_1208

seq1  GAATTCAAAGGATACTTTCACAAACTAGACAACAGAAACCATTAAGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGATACTTTCACAAACTAGACAACAGAAACCATTAAGTTTG  50

seq1  GAATACTCTGAGACAGTCTTAAGGGTTAGAAAAGCCAATAGCCAAAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTCTGAGACAGTCTTAAGGGTTAGAAAAGCCAATAGCCAAAGGGA  100

seq1  CTACCGTGTACTATGTGAGGAACAATTTCCAGAAGTGAGAGTAGACAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCGTGTACTATGTGAGGAACAATTTCCAGAAGTGAGAGTAGACAAGG  150

seq1  GCCACAGAGAACATTGTGAAAACCTGCATTTTTAGGTGTAATTTATACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGAGAACATTGTGAAAACCTGCATTTTTAGGTGTAATTTATACCA  200

seq1  TGTAAGCTCTCCAGAATAGGTGACTTTCTTTAGGGCTGTTTCCTGACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCTCTCCAGAATAGGTGACTTTCTTTAGGGCTGTTTCCTGACCAA  250

seq1  GTGGCTGGCAGACCCATTAAATGAACTATTTATTTGTTTGTTTGCTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGCAGACCCATTAAATGAACTATTTATTTGTTTGTTTGCTTGCT  300

seq1  TGCTTCCTTGCTTGCCTAGTGCATGTATGTATACCATGTGAATACAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTTGCTTGCCTAGTGCATGTATGTATACCATGTGAATACAGTGC  350

seq1  GGATGTTCTATAGTCTGCCTGTAGAGGTCAGAGAACAGCCCTGGGTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTCTATAGTCTGCCTGTAGAGGTCAGAGAACAGCCCTGGGTACTG  400

seq1  GTACAGGGTACATTCTGCTTCTGGGGATGTTCTGTCTCCGTGTTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGTACATTCTGCTTCTGGGGATGTTCTGTCTCCGTGTTTCATTT  450

seq1  CCCCATAAGCGAACTGGGATTACAGACCCTACATGAGTATGGCTTTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATAAGCGAACTGGGATTACAGACCCTACATGAGTATGGCTTTTACA  500

seq1  CGGGTTTGGGAGAAAACTGAACCCAGAAAGATCATTATGCAAACAGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTGGGAGAAAACTGAACCCAGAAAGATCATTATGCAAACAGCTAA  550

seq1  TGTAAGCACCCTTACCCACTGAGCTCTTTCCAGCTCTGGATTTTTATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCACCCTTACCCACTGAGCTCTTTCCAGCTCTGGATTTTTATGAG  600

seq1  TGAGGATATGGTATGCCTTTGTTCTTTTCCAGGAAGCCTCCAGATAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATATGGTATGCCTTTGTTCTTTTCCAGGAAGCCTCCAGATAGATA  650

seq1  GTAATAATATGACCTGATCAGTTTAGAGTGTCCTGCTCCTACCTAGGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAATATGACCTGATCAGTTTAGAGTGTCCTGCTCCTACCTAGGGCT  700

seq1  AGAGACAGGACTCAGATCTCATTCTGTTCACCAGTCTTCAAAGCCTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGACTCAGATCTCATTCTGTTCACCAGTCTTCAAAGCCTTGCA  750

seq1  GCTTTGGCTTTCACCGTTAAATGCAGCTGGCTGTGAGGAGTGGATCCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGCTTTCACCGTTAAATGCAGCTGGCTGTGAGGAGTGGATCCATC  800

seq1  CTTGCCTTCTCTTGACTACCCTCCTAACACAGTCATTTGACCTGTCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTCTCTTGACTACCCTCCTAACACAGTCATTTGACCTGTCATTT  850

seq1  CATGACCTTGTGCCTTTGTCAAAGACCAACAGGCAGAGATACCCAACAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTTGTGCCTTTGTCAAAGACCAACAGGCAGAGATACCCAACAGC  900

seq1  CCCTGGGCCTTTATTTCAACATGGCCCCCATTGCTTGACCGACTTGAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGCCTTTATTTCAACATGGCCCCCATTGCTTGACCGACTTGAATG  950

seq1  GATCCATCCACCCA-CTCTTCTGGGCTGGGTACTGTCTTGCAGCTTT-GT  998
      |||||||||||||| ||||||||| |||||||||||||||||||||| ||
seq2  GATCCATCCACCCACCTCTTCTGGCCTGGGTACTGTCTTGCAGCTTTGGT  1000

seq1  CTTGCTCATCTCCCATCTCCATAGTGCTGCAGCTTGCCTTTGACAGTACT  1048
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTGCTCATCTCCCATCTCCATAGTGCTGCAGCTTGCC-TTGACAGTACT  1049

seq1  AAACTTCTGCATCTGGGCTCTACCTTGATG-CTCTGCTAAG-CTTGCCTC  1096
       ||||||||||||||||||||| ||  ||| ||||||| || ||||||||
seq2  -AACTTCTGCATCTGGGCTCTA-CTGAATGCCTCTGCTTAGCCTTGCCTC  1097

seq1  CAGCAGCTCTCCAACTGGG-CTAATTAATATCTTATGTAACCACCTGC  1143
       ||||||||| | |||||| |||| |||  || || ||||||||||||
seq2  AAGCAGCTCT-CGACTGGGCCTAAATAAATTCCTAGGTAACCACCTGC  1144