BAC Information

Click to search

BAC

Clone NameB6Ng01-278B07
Chromosome13 (Build37)
Map Location 8,583,597 - 8,759,034
singlet/doubletdoublet
Overlap geneAdarb2
Upstream geneLOC791083, LOC382722, EG666941
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c, LOC666986, Zmynd11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278B07.bB6Ng01-278B07.g
ACCGA078421GA078422
length1,149979
definitionB6Ng01-278B07.b B6Ng01-278B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,757,902 - 8,759,034)(8,583,597 - 8,584,572)
sequence
gaattctttgacctctataaacaaatttgatcccctagtctcttatgaaa
gtttgggttgtttctggagaaacagtactgtagacaccatgactcataaa
tctatccctggaacttatgtccctgatggtgctgggtagccactgctttc
tctgactcttgcatatgccaaagtgatggtattctcggacaatatctgaa
aggtaccccactctgcctccttccgtcttgtttaagaccctgaacttcat
gccaattatttttataaccaataactctgtttggagctcactgctctgat
gtggtgtgtgctctccattcaaaatctcaaaatacaaatgatttgagggc
aggtcctagagttcagctaggaagttactgtgcctaaccgttgaaggatt
aatgctaatccatattcaactctcaaggtttcttgtgtttctaagcctcc
ccctagtgatatatcaagttatcatagatcactgtgagttggcattttga
tcttagcctttaccttgagttaagattacattttcctcaatatttatgat
atgaatcactcatttgcagaaacatttgcatgtctttgaaagtttatctt
gaacacattcctacaatggtgttcatattctgttctcaaaggactttaat
gatgtgatctcatattaaatccaaggaattaatatctcagcttttctttt
tattgaatagctacaattgaatgtatttcatgtttaccaaattcatgtga
catctggagataagataaaataaaagcatcatggtgtaatggttgaattt
tattgggggatgatgcactagaattctaatctacactcccatattctcaa
cctggttcctacgattcgataaaaccacacaaaatggaacagaaatccct
aatgcatctcacatgggattaaacacggattattttctttaactttatgt
ctatgatattttgcccacatgtttatgtaggtgcactgcatggatgatgt
gcagcatgctggggcctgaattatggatggcctagaaaacatgccatggt
ggcagctaggaacctcaaccagaaatcctctataggcagcaggcaagctc
ctactgcctgaagccattctcatctccagcccgttccacatggggttca
gaattcccatgaaaaaccatcctcctggctctccaggcttctgctggtgc
ttctgtggagcattggggtgctggcagtgtgccaagggctcccatttgag
aaggctgcctttgtcagcttaaagtctacagctgcactatcatataaagg
ctttctggggatgggtgggcagccccttcctttgggattcattgttacac
tgaaaaggagaaagacagcagaaagaacatggcaaatgggagaatgccaa
cgtgtaaatgagctggagaaagaaaagatgaagatccaagagaaaagaaa
gagtccccagtcaccagacctagaagggggtgacaaagaatacacataga
ggaggtgccaaggctgcctttgccttcctagccccagatggcatctaggg
gagatcccacccctttgagatctccctccctctgcagatgcagtcaagac
tttctgtctcctctctggcacagtggtgacttaagctacattcatttctg
agcttctgtgaacccatggcagaggctagggaagtggcctaatgagagtc
tcatgttggagccgagactctgcacagtgctgctttgcctactaaggtta
cgtggtaatgggaaaagtccggagcgaggttcaagtgcgatgtggaatct
ggatgcttgctctctagcttcgtggtccttggcttctctccctcatccta
gctctggttccctgggcaaacaatgcccagatagaagtcataatgtaaga
tttgtgggtgggttagagcaagggagttgaatatcaagagcagaattctt
catggaaacccactgaccagctttaggaataaggtatagaggcaccacgg
gggaagactctcagactgctaagcacaagacatcagacctaaaatcagca
cgcacggcaagagctctcctgcaaactggtcctctcgagcaacttcaata
gttgtcccaaaacttggcatcaacttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8757902_8759034
seq2: B6Ng01-278B07.b_42_1190 (reverse)

seq1  TGAACCCCATGTG--ACGGGCTGGAGA----GATGGC-TCA-GCAGTTAG  42
      |||||||||||||  ||||||||||||     ||||| ||| |||| |||
seq2  TGAACCCCATGTGGAACGGGCTGGAGATGAGAATGGCTTCAGGCAG-TAG  49

seq1  GAGCTTTGCTGCT-TCTATAGAGGA-CTCTGGTTGA-GTTCCCAGCTTCC  89
      ||||||  |||||  ||||||||||  ||||||||| ||||| |||| ||
seq2  GAGCTTGCCTGCTGCCTATAGAGGATTTCTGGTTGAGGTTCCTAGCTGCC  99

seq1  A-CACGGCA-GCTTAC--AGCCATCCATAACTCCAGCCCCAGCA-GCTCC  134
      | || |||| | || |   ||||||||||| ||  ||||||||| ||| |
seq2  ACCATGGCATGTTTTCTAGGCCATCCATAATTCAGGCCCCAGCATGCTGC  149

seq1  ACA-CATCCATGCAGTGCACCTACATAA--ATGTGGGCAAATTATCATAG  181
      ||| ||||||||||||||||||||||||  ||||||||||| ||||||||
seq2  ACATCATCCATGCAGTGCACCTACATAAACATGTGGGCAAAATATCATAG  199

seq1  ACATAAAGTTAAAATAAATAAATCCTTTTTAATCCCATCTGAGATGCATT  231
      |||||||||||||  ||||||  | | ||||||||||| |||||||||||
seq2  ACATAAAGTTAAAGAAAATAATCCGTGTTTAATCCCATGTGAGATGCATT  249

seq1  ACGGATTTCTGTTTCATTTTGTTTTGTTTTTAAAGAATAGGAGGAACCAT  281
      | ||||||||||| ||||||| | || |||||  |||| | |||||||| 
seq2  AGGGATTTCTGTTCCATTTTG-TGTGGTTTTATCGAATCGTAGGAACCAG  298

seq1  GTTTAGAATATGGGAGTCTTGATTAGAATTCTAGTGCATCATCCCCCAAT  331
      ||| ||||||||||||| | ||||||||||||||||||||||||||||||
seq2  GTTGAGAATATGGGAGTGTAGATTAGAATTCTAGTGCATCATCCCCCAAT  348

seq1  AAAATTCAACCATTACATCATGATGCTTTTATTCTATCTTATATTGCAGA  381
      ||||||||||||||||| ||||||||||||||| ||||||||  | ||||
seq2  AAAATTCAACCATTACACCATGATGCTTTTATTTTATCTTAT-CTCCAGA  397

seq1  TGTCACAAGAATTTGGTAAACATGAAATACATTCAATTGTAGCTATTCAA  431
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATGAATTTGGTAAACATGAAATACATTCAATTGTAGCTATTCAA  447

seq1  TAAAAAGAAAAGTGGAGATATTAATTCCTTGGATTTAATATGAGATCACA  481
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAAAGCTGAGATATTAATTCCTTGGATTTAATATGAGATCACA  497

seq1  TCACTAAAGTCCTTTGAGAAAAGAATATGAACACCATTGTAGGAATGTGT  531
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCATTAAAGTCCTTTGAGAACAGAATATGAACACCATTGTAGGAATGTGT  547

seq1  TCAAGATAAACTTTCAAAGACATGCAAATGTTTCTGCAAATGAGTGATTC  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATAAACTTTCAAAGACATGCAAATGTTTCTGCAAATGAGTGATTC  597

seq1  ATATCATAAATATTGAGGAAAATGTAATCTTAACTCAAGGTAAAGGCTAA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAAATATTGAGGAAAATGTAATCTTAACTCAAGGTAAAGGCTAA  647

seq1  GATCAAAATGCCAACTTACAGTGATCTCTGATAACTTGATATATCACTAG  681
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  GATCAAAATGCCAACTCACAGTGATCTATGATAACTTGATATATCACTAG  697

seq1  GGGGAGGCTTAGAAACACAAGAAACCTTGAGAGCTGAATATGGCTTAGCT  731
      ||||||||||||||||||||||||||||||||| ||||||||| ||||| 
seq2  GGGGAGGCTTAGAAACACAAGAAACCTTGAGAGTTGAATATGGATTAGCA  747

seq1  GTAATCCTTCAACGGTTAGGCACAGTTACTTCCTAGCTGAACTCTAGGAC  781
       ||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAATCCTTCAACGGTTAGGCACAGTAACTTCCTAGCTGAACTCTAGGAC  797

seq1  CTGCCCTCAAATCATTTGTATTCTGAGCTATTGAATGGAGAGCACACAGC  831
      |||||||||||||||||||||| |||| | |||||||||||||||||| |
seq2  CTGCCCTCAAATCATTTGTATTTTGAGATTTTGAATGGAGAGCACACACC  847

seq1  ACATCAGAGCAGTGAGCTCCAAACAGAGTTATTGGTTATAAAAATAATTG  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGAGCAGTGAGCTCCAAACAGAGTTATTGGTTATAAAAATAATTG  897

seq1  GCATTAACTTCAGGGTCTTAAACAAGATGGAAGGAGGCAGAGTGGGGTAC  931
      |||| || ||||||||||||||||||| ||||||||||||||||||||||
seq2  GCATGAAGTTCAGGGTCTTAAACAAGACGGAAGGAGGCAGAGTGGGGTAC  947

seq1  CTTTCAGATATTCTCAGAGAATACCATCACTTTGGCCTATGCAAGAGTCA  981
      |||||||||||| || |||||||||||||||||||| |||||||||||||
seq2  CTTTCAGATATTGTCCGAGAATACCATCACTTTGGCATATGCAAGAGTCA  997

seq1  GAGAAAGCAGTGGCTACCCAGCACCATCATGGACATAAGTTCCAGGGATA  1031
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAGAAAGCAGTGGCTACCCAGCACCATCAGGGACATAAGTTCCAGGGATA  1047

seq1  GATTTATGACTCATGGTGTCTACAGTACTGTTTCTCCAGAAACAACCCAA  1081
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGAGTCATGGTGTCTACAGTACTGTTTCTCCAGAAACAACCCAA  1097

seq1  ACTTTCCTAAGAGACTAGGGGATCAAATTTGTTTATAGAGGTAAAAGAAT  1131
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTTTCATAAGAGACTAGGGGATCAAATTTGTTTATAGAGGTCAAAGAAT  1147

seq1  TC  1133
      ||
seq2  TC  1149

seq1: chr13_8583597_8584572
seq2: B6Ng01-278B07.g_63_1039

seq1  GAATTCCCATGAAAAACCATCCTCCTGGCTCTCCAGGCTTCTGCTGGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGAAAAACCATCCTCCTGGCTCTCCAGGCTTCTGCTGGTGC  50

seq1  TTCTGTGGAGCAGTGGGGTGCTGGCAGTGTGCCAAGGGCTCCCATTTGAG  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGAGCATTGGGGTGCTGGCAGTGTGCCAAGGGCTCCCATTTGAG  100

seq1  AAGGCTGCCTTTGTCAGCTTAAAGTCTACAGCTGCACTAGCGTAGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||| | || |||||
seq2  AAGGCTGCCTTTGTCAGCTTAAAGTCTACAGCTGCACTATCATATAAAGG  150

seq1  CTTTCTGGGGATGGGTGGGCAGCCCCTTCCTTTGGGATTCATTGTTACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGGGATGGGTGGGCAGCCCCTTCCTTTGGGATTCATTGTTACAC  200

seq1  TGAAAAGGAGAGAGACAGCAGAAAGAAGATGGCAAATGGGAGAATGCCAA  250
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  TGAAAAGGAGAAAGACAGCAGAAAGAACATGGCAAATGGGAGAATGCCAA  250

seq1  CGTGTAAATGAGCTGGAGAAAGAAAAGATGAAGATCCAAGAGAAAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAATGAGCTGGAGAAAGAAAAGATGAAGATCCAAGAGAAAAGAAA  300

seq1  GAGTCCCCAGTCACCAGACCTAGAAGGGGGTGACAAAGAATACACATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCCAGTCACCAGACCTAGAAGGGGGTGACAAAGAATACACATAGA  350

seq1  GGAGGTGCCAAGGCTGCCTTTGCCTTCCTAGCCCCAGATGGCATCTAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGCCAAGGCTGCCTTTGCCTTCCTAGCCCCAGATGGCATCTAGGG  400

seq1  GAGATCCCACCCCTTTGAGATCTCCCTCCCTCTGCAGATGCAGTCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCCACCCCTTTGAGATCTCCCTCCCTCTGCAGATGCAGTCAAGAC  450

seq1  TTTCTGTCTCCTCTCTGGCACAGTGGTGACTTAGGCTACATTCATTTCTG  500
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTCTGTCTCCTCTCTGGCACAGTGGTGACTTAAGCTACATTCATTTCTG  500

seq1  AGCTTCTGTGAACCCATGGCAGAGGCTAGGGAAGTGGCCTAATGAGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGTGAACCCATGGCAGAGGCTAGGGAAGTGGCCTAATGAGAGTC  550

seq1  TCAGGTTGGAGCCGAGACTCTGCACAGTGCTGCTTTGCCTACTAAGGTTA  600
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTGGAGCCGAGACTCTGCACAGTGCTGCTTTGCCTACTAAGGTTA  600

seq1  CGTGGTAATGGGAAAAGTCCGGAGCGAGGTTCAAGTGCGATGTGGAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTAATGGGAAAAGTCCGGAGCGAGGTTCAAGTGCGATGTGGAATCT  650

seq1  GGATGCTTGCTCTCGAGCTTCGTGGTCCTTGGCTTCTCTCCCTCATCCTA  700
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGATGCTTGCTCTCTAGCTTCGTGGTCCTTGGCTTCTCTCCCTCATCCTA  700

seq1  GCTCTGGTTCCCTGGGCAAACAATGCCCAGATAGAAGTCAGAATGTAAGA  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCTCTGGTTCCCTGGGCAAACAATGCCCAGATAGAAGTCATAATGTAAGA  750

seq1  TTTGTGGGTGGGTTAGAGCAGGGGAGTTGAAGAGCAAGAGCAGAATTCTT  800
      |||||||||||||||||||| |||||||||| | ||||||||||||||||
seq2  TTTGTGGGTGGGTTAGAGCAAGGGAGTTGAATATCAAGAGCAGAATTCTT  800

seq1  CATGGAAACCCACAGACCAGCAGTAGGGAAAAGGTAGAGAGGCACCACTG  850
      ||||||||||||| |||||||  |||| | |||||| ||||||||||| |
seq2  CATGGAAACCCACTGACCAGCTTTAGGAATAAGGTATAGAGGCACCACGG  850

seq1  GGGAAGACTCTCAGACTGCAAAGCACAAGAGAGCAAACCTAACATCAGCC  900
      ||||||||||||||||||| |||||||||| | || |||||| |||||| 
seq2  GGGAAGACTCTCAGACTGCTAAGCACAAGACATCAGACCTAAAATCAGCA  900

seq1  CACACACCAGGAGCTCCCCTGCAAACTGG-CCACTCGGGCAACTTCAATA  949
      | |||  || |||||| |||||||||||| || |||| ||||||||||||
seq2  CGCACGGCAAGAGCTCTCCTGCAAACTGGTCCTCTCGAGCAACTTCAATA  950

seq1  GTTGTCCCAGAACTTGGCATCAACTTG  976
      ||||||||| |||||||||||||||||
seq2  GTTGTCCCAAAACTTGGCATCAACTTG  977