BAC Information

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BAC

Clone NameB6Ng01-278B22
Chromosome13 (Build37)
Map Location 32,481,406 - 32,590,208
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042491, Foxq1, LOC100041312, Foxf2, Foxc1, 4930548F15Rik, Gmds, LOC666212
Downstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278B22.bB6Ng01-278B22.g
ACCGA078447GA078448
length1,016925
definitionB6Ng01-278B22.b B6Ng01-278B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,481,406 - 32,482,266)(32,589,666 - 32,590,208)
sequence
gaattctttgtttcgctctgaaccccatttttaatagggttatttggttt
tctggagtccaccttcttgagttctttatatatattggatattagccccc
tatcagatttaggattggtaaagatcttttcccaaactgttggttgccat
tttgtcttattgacagtgtcctttaccttgcaaaagctttgcaattttat
gaggtcccatttgtcgattcttgatcttacatctgttcaggaattttttt
ccctgtgctcttcgaggctcttccctactttctcctctataagtttcagc
atctctggttttatgtggagttccttgatccacttagacttgagctttgt
gcaagatgtgtttttcaaaccactaagtttgtggcaaatttttaaagcaa
tagtaaattgatagaaagctatgttgaacatttttttaatttctatctct
tcttagtatttttccttcttaaaaataacttcaaaatttattgtttatca
ttaatatttttcaatgaatatacatatacatttccctcacgtctagataa
atgacagcatatgctacctactaggaagttcagagtctctggagaaagag
aacgagtagaatgtatgtaaagaggggtacaggagaggactatctcacac
aattgcagaggctgaaaacctccacatatgctgtctgcaaactagagagc
cagggaagccaatcaaagctcagtctaacaagatggaagccttagaacta
gaagagaccggtgatgatcactagtctcacgctgagggtcaggagttcat
ggagaccctctagttgcactcacagattccaaagcttgaagatcatggag
tcttatatctaatgtcagcaccagaagaatccttttccatttccccttcc
aactgggtatgctgctaagatatttatcttgatagtatggagtagaaaat
ctgctactgtgggtagcaacattcctagctgcctttcaaacctgatcaaa
agaaggtaactgacta
gaattctacagggtgatgccctcaggaagagagggcccctgtgagaggag
ctggttgagaaagctctgtggtgtctggacacagtgaagtcctttccttc
ccacactcacaggacctgaatagagatgagctgtggcaataagggaggaa
ggatccatttacctactttgaagaaagcatcgagggaaatttccaagaga
gggaaagtctacagggtggaaggaaatatctgggacaggagttccagtta
aagcttaatatctccaatatttatctccagctaacgttcaatatccagaa
tatccaaagaattcctagaccacattaaaaagcacaatccaattctgaga
cagaaaagggattcccatgtctctttgaggaagacacacaagtgcccatt
ttgccagtgaaatgatgccagccagcatccttgagcaccagggacatgca
aatggaagccacaaggacatattgctttatgtcctctgagatgactgtaa
caatattgttttaacatggaaaacaagcagtggtgagaatatggagaaat
gagagccctcttatagggctggggggagcttgggatggcacagctgctgt
gggaacagtatagcaattccccaggaaagctaaacatagaattaccatgt
gaactctgagggtctaaaagctaggcttgaaaaaaataattaggcatcag
tcttgacaccatgtgtccatcaacaaacacacggataagcaaaatgcaga
atgcaagcacagtgaaatactattcgatcattagaaacaacggatgtggg
tgaagcttgaaaatctttaactaggaagccaaatgtacaaaaatgcaagt
gttaactgactccctcctccaggaaatactaagataggaaagcatgcaga
tagaaagtaaaggttacagtgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_32481406_32482266
seq2: B6Ng01-278B22.b_215_1063

seq1  GTCCTTTACCTTGCAAAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTACCTTGCAAAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGA  50

seq1  TTCTTGATCTTACATCTGTTCAGGAATTTTTTTCCCTGTGCTCTTCGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATCTTACATCTGTTCAGGAATTTTTTTCCCTGTGCTCTTCGAGG  100

seq1  CTCTTCCCTACTTTCTCCTCTATAAGTTTCAGCATCTCTGGTTTTATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCTACTTTCTCCTCTATAAGTTTCAGCATCTCTGGTTTTATGTG  150

seq1  GAGTTCCTTGATCCACTTAGACTTGAGCTTTGTGCAAGATGTGTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCTTGATCCACTTAGACTTGAGCTTTGTGCAAGATGTGTTTTTCA  200

seq1  AACCACTAAGTTTGTGGCAAATTTTTAAAGCAATAGTAAATTGATAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTAAGTTTGTGGCAAATTTTTAAAGCAATAGTAAATTGATAGAAA  250

seq1  GCTATGTTGAACATTTTTTTAATTTCTATCTCTTCTTAGTATTTTTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTTGAACATTTTTTTAATTTCTATCTCTTCTTAGTATTTTTCCTT  300

seq1  CTTAAAAATAACTTCAAAATTTATTGTTTATCATTAATATTTTTCAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAATAACTTCAAAATTTATTGTTTATCATTAATATTTTTCAATGA  350

seq1  ATATACATATACATTTCCCTCACGTCTAGATAAATGACAGCATATGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATATACATTTCCCTCACGTCTAGATAAATGACAGCATATGCTAC  400

seq1  CTACTAGGAAGTTCAGAGTCTCTGGAGAAAGAGAACGAGTAGAATGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGAAGTTCAGAGTCTCTGGAGAAAGAGAACGAGTAGAATGTATG  450

seq1  TAAAGAGGGGTACAGGAGAGGACTATCTCACACAATTGCAGAGGCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGGGGTACAGGAGAGGACTATCTCACACAATTGCAGAGGCTGAAA  500

seq1  ACCTCCACATATGCTGTCTGCAAACTAGAGAGCCAGGGAAGCCAATCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCACATATGCTGTCTGCAAACTAGAGAGCCAGGGAAGCCAATCAAA  550

seq1  GCTCAGTCTAACAAGATGGAAGCCTTAGAACTAG-AGAGACCGGTGATGA  599
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTCAGTCTAACAAGATGGAAGCCTTAGAACTAGAAGAGACCGGTGATGA  600

seq1  TCACTAGTCTCACGCTGAGGGTCAGGAGTTCATGGAGACCCTCTAGTTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGTCTCACGCTGAGGGTCAGGAGTTCATGGAGACCCTCTAGTTGC  650

seq1  ACTCACAGATTCCAAAGCTTGAAGATCATGGAGTCTTATATCTAATGTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGATTCCAAAGCTTGAAGATCATGGAGTCTTATATCTAATGTCA  700

seq1  GCACCAGAAGAATCCTTTTCCATTTTCCCCTTCCAACTGGGTATGCTGCT  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCACCAGAAGAATCCTTTTCCA-TTTCCCCTTCCAACTGGGTATGCTGCT  749

seq1  AAGATA-TTATCTTGATTAGGTTTATTGAAGTAGGAAGATCTGGCTACTG  798
      |||||| ||||||||| |||   || || |||| ||| |||| |||||||
seq2  AAGATATTTATCTTGA-TAG---TA-TGGAGTA-GAAAATCT-GCTACTG  792

seq1  TGGGTAGCACCATTCCCTAGGCTGGCTTTCAAAACTGTATCAAAAGAGAA  848
      ||||||||| |||| |||| |||| |||||||| ||| ||||||  ||||
seq2  TGGGTAGCAACATT-CCTA-GCTGCCTTTCAAACCTG-ATCAAA--AGAA  837

seq1  GGTAAACTGACTA  861
      ||| |||||||||
seq2  GGT-AACTGACTA  849

seq1: chr13_32589666_32590208
seq2: B6Ng01-278B22.g_67_609 (reverse)

seq1  CATATTCTCACCACTGCTTGTTTTCCATGTTAAAACAATATTGTTACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTCACCACTGCTTGTTTTCCATGTTAAAACAATATTGTTACAGT  50

seq1  CATCTCAGAGGACATAAAGCAATATGTCCTTGTGGCTTCCATTTGCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGAGGACATAAAGCAATATGTCCTTGTGGCTTCCATTTGCATGT  100

seq1  CCCTGGTGCTCAAGGATGCTGGCTGGCATCATTTCACTGGCAAAATGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTGCTCAAGGATGCTGGCTGGCATCATTTCACTGGCAAAATGGGC  150

seq1  ACTTGTGTGTCTTCCTCAAAGAGACATGGGAATCCCTTTTCTGTCTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGTGTCTTCCTCAAAGAGACATGGGAATCCCTTTTCTGTCTCAGA  200

seq1  ATTGGATTGTGCTTTTTAATGTGGTCTAGGAATTCTTTGGATATTCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTGTGCTTTTTAATGTGGTCTAGGAATTCTTTGGATATTCTGGA  250

seq1  TATTGAACGTTAGCTGGAGATAAATATTGGAGATATTAAGCTTTAACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACGTTAGCTGGAGATAAATATTGGAGATATTAAGCTTTAACTGG  300

seq1  AACTCCTGTCCCAGATATTTCCTTCCACCCTGTAGACTTTCCCTCTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGTCCCAGATATTTCCTTCCACCCTGTAGACTTTCCCTCTCTTG  350

seq1  GAAATTTCCCTCGATGCTTTCTTCAAAGTAGGTAAATGGATCCTTCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCCCTCGATGCTTTCTTCAAAGTAGGTAAATGGATCCTTCCTCC  400

seq1  CTTATTGCCACAGCTCATCTCTATTCAGGTCCTGTGAGTGTGGGAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGCCACAGCTCATCTCTATTCAGGTCCTGTGAGTGTGGGAAGGAA  450

seq1  AGGACTTCACTGTGTCCAGACACCACAGAGCTTTCTCAACCAGCTCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTCACTGTGTCCAGACACCACAGAGCTTTCTCAACCAGCTCCTCT  500

seq1  CACAGGGGCCCTCTCTTCCTGAGGGCATCACCCTGTAGAATTC  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGCCCTCTCTTCCTGAGGGCATCACCCTGTAGAATTC  543