MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-279N03
Chromosome	13 (Build37)
Map Location	61,040,374 - 61,041,536
singlet/doublet	singlet
Overlap gene	Tpbpa
Upstream gene	LOC100041267, Gas1, EG328264, Dapk1, LOC218274, BC051665, 2310051M13Rik, 4930486L24Rik, Tpbpb, Ctla2a
Downstream gene	Ctsj, Ctsq, Ctsr, Cts6, Cts8, Cts8-ps, LOC435362, Cts7, Cts7-ps, EG624056, LOC665717, Ctsm, Cts3, EG665401, LOC624140, EG623505, LOC665415, LOC673332, BC052688, EG638502, LOC100041382
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041267 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Gas1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14451 MGI:95655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG328264 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328264 MGI:3647835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dapk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69635 MGI:1916885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC218274 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	BC051665 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218275 MGI:2682300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310051M13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70202 MGI:1917452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930486L24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214639 MGI:1922258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpbpb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116913 MGI:2151721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctla2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13024 MGI:88554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpbpa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21984 MGI:98795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctsj (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26898 MGI:1349426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctsq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104002 MGI:2137385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctsr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56835 MGI:1861723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cts6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58518 MGI:1889619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cts8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56094 MGI:1860275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cts8-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116911 MGI:2151708
definition	gene_synonym : Cts2-ps note : cathepsin 8, pseudogene pseudo : _no_value

name	LOC435362 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435362
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Cts7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56092 MGI:1860262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cts7-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116909 MGI:2151716
definition	gene_synonym : Cts1; Cts1-ps note : cathepsin 7, pseudogene pseudo : _no_value

name	EG624056 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624056 MGI:3643776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins

name	LOC665717 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 ESTs, 7 Proteins pseudo : _no_value

name	Ctsm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64139 MGI:1927229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cts3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117066 MGI:2151929
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665401 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665401 MGI:3647115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 61 ESTs, 6 Proteins pseudo : _no_value

name	LOC624140 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	EG623505 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623505 MGI:3644667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 95 ESTs, 5 Proteins

name	LOC665415 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 82 ESTs, 1 Protein pseudo : _no_value

name	LOC673332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	BC052688 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432812 MGI:3583898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 48 ESTs

name	EG638502 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:638502 MGI:3643235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041382 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041382
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041267 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264252 GeneID:100041267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : hypothetical protein LOC100041267 transcript_id : XM_001476070.1

name	Gas1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679940 GeneID:14451 MGI:95655
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest specific 1 transcript_id : NM_008086.1

name	EG328264 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373360 GeneID:328264 MGI:3647835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG328264 transcript_id : NM_177810.3

name	Dapk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205417 GeneID:69635 MGI:1916885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : death associated protein kinase 1 transcript_id : NM_029653.2

name	Dapk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205407 GeneID:69635 MGI:1916885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : death associated protein kinase 1 transcript_id : NM_134062.1

name	BC051665 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40255290 GeneID:218275 MGI:2682300
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC051665 transcript_id : NM_199148.1

name	2310051M13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367151 GeneID:70202 MGI:1917452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310051M13 gene transcript_id : NM_027344.3

name	4930486L24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342510 GeneID:214639 MGI:1922258
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930486L24 gene transcript_id : NM_178098.2

name	Tpbpb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345208 GeneID:116913 MGI:2151721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trophoblast specific protein beta transcript_id : NM_026429.2

name	Ctla2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681076 GeneID:13024 MGI:88554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytotoxic T lymphocyte-associated protein 2 alpha transcript_id : NM_007796.1

name	Tpbpa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386437 GeneID:21984 MGI:98795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trophoblast specific protein alpha transcript_id : NM_009411.3

name	Ctsj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7770061 GeneID:26898 MGI:1349426
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin J transcript_id : NM_012007.1

name	Ctsq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892435 GeneID:104002 MGI:2137385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin Q transcript_id : NM_029636.3

name	Ctsr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9931985 GeneID:56835 MGI:1861723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin R transcript_id : NM_020284.1

name	Cts6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946819 GeneID:58518 MGI:1889619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin 6 transcript_id : NM_021445.1

name	Cts8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46358367 GeneID:56094 MGI:1860275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin 8 transcript_id : NM_019541.2

name	Cts7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130674 GeneID:56092 MGI:1860262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin 7 transcript_id : NM_019539.3

name	EG624056 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63642993 GeneID:624056 MGI:3643776
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins product : predicted gene, EG624056 transcript_id : XM_621334.1

name	Ctsm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981228 GeneID:64139 MGI:1927229
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin M transcript_id : NM_022326.2

name	Cts3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19424143 GeneID:117066 MGI:2151929
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin 3 transcript_id : NM_026906.2

name	EG623505 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395163 GeneID:623505 MGI:3644667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 95 ESTs, 5 Proteins product : predicted gene, EG623505 transcript_id : XM_887972.2

name	LOC673332 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264255 GeneID:673332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to CDNA sequence BC012278 transcript_id : XM_001476261.1

name	BC052688 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395164 GeneID:432812 MGI:3583898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs product : cDNA sequence BC052688, transcript variant 1 transcript_id : XM_888474.2

name	LOC100041267 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264253 GeneID:100041267
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476120.1

name	Gas1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679941 CCDS:CCDS26579.1 GeneID:14451 MGI:95655
definition	GO_component : GO:0046658 - anchored to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IDA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence TAS]; GO:0045749 - negative regulation of S phase of mitotic cell cycle [Evidence NAS]; GO:0012501 - programmed cell death [Evidence IDA] codon_start : 1 product : growth arrest specific 1 protein_id : NP_032112.1

name	EG328264 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244354 GeneID:328264 MGI:3647835
definition	codon_start : 1 product : hypothetical protein LOC328264 protein_id : NP_808478.1

name	Dapk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205418 CCDS:CCDS26581.1 GeneID:69635 MGI:1916885
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0004685 - calcium- and calmodulin-dependent protein kinase activity [Evidence IDA]; GO:0005516 - calmodulin binding [Evidence IEA] [Evidence IDA]; GO:0004684 - calmodulin-dependent protein kinase I activity [Evidence TAS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0008624 - induction of apoptosis by extracellular signals [Evidence TAS]; GO:0043065 - positive regulation of apoptosis [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : death associated protein kinase 1 protein_id : NP_083929.2

name	Dapk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205408 GeneID:69635 MGI:1916885
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0004685 - calcium- and calmodulin-dependent protein kinase activity [Evidence IDA]; GO:0005516 - calmodulin binding [Evidence IEA] [Evidence IDA]; GO:0004684 - calmodulin-dependent protein kinase I activity [Evidence TAS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0008624 - induction of apoptosis by extracellular signals [Evidence TAS]; GO:0043065 - positive regulation of apoptosis [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : death associated protein kinase 1 protein_id : NP_598823.1

name	BC051665 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40255291 CCDS:CCDS26582.1 GeneID:218275 MGI:2682300
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cathepsin L-like product : hypothetical protein LOC218275 protein_id : NP_954599.1

name	2310051M13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625773 GeneID:70202 MGI:1917452
definition	GO_function : GO:0004217 - cathepsin L activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC70202 protein_id : NP_081620.2

name	4930486L24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017423 CCDS:CCDS26583.1 GeneID:214639 MGI:1922258
definition	codon_start : 1 product : testin protein_id : NP_835199.1

name	Tpbpb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385926 GeneID:116913 MGI:2151721
definition	codon_start : 1 product : trophoblast specific protein beta protein_id : NP_080705.1

name	Ctla2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681077 GeneID:13024 MGI:88554
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cytotoxic T lymphocyte-associated protein 2 alpha protein_id : NP_031822.1

name	Tpbpa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560633 GeneID:21984 MGI:98795
definition	GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : clone 4311 product : trophoblast specific protein alpha protein_id : NP_033437.2

name	Ctsj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7770062 GeneID:26898 MGI:1349426
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : cathepsin P; rat gene/Cathepsin L-related protein; Cat P product : cathepsin J protein_id : NP_036137.1

name	Ctsq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532972 CCDS:CCDS26584.1 GeneID:104002 MGI:2137385
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] codon_start : 1 product : cathepsin Q protein_id : NP_083912.2

name	Ctsr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9931986 CCDS:CCDS26585.1 GeneID:56835 MGI:1861723
definition	GO_component : GO:0005764 - lysosome [Evidence ISS] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : lysosomal cysteine protease product : cathepsin R protein_id : NP_064680.1

name	Cts6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946820 CCDS:CCDS26586.1 GeneID:58518 MGI:1889619
definition	codon_start : 1 product : cathepsin 6 protein_id : NP_067420.1

name	Cts8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46358368 CCDS:CCDS26587.1 GeneID:56094 MGI:1860275
definition	GO_function : GO:0004217 - cathepsin L activity [Evidence ISS] codon_start : 1 exception : mismatches in translation note : ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 68 product : cathepsin 8 protein_id : NP_062414.2

name	Cts7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956098 CCDS:CCDS26588.1 GeneID:56092 MGI:1860262
definition	GO_function : GO:0004217 - cathepsin L activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : ectoplacental cone, invasive trophoblast giant cells, extraembryonic ectoderm and chorion sequence 24 product : cathepsin 7 protein_id : NP_062412.1

name	EG624056 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63642994 GeneID:624056 MGI:3643776
definition	codon_start : 1 product : hypothetical protein protein_id : XP_621334.1

name	Ctsm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981229 GeneID:64139 MGI:1927229
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : Cat M product : cathepsin M protein_id : NP_071721.2

name	Cts3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19424144 GeneID:117066 MGI:2151929
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : cathepsin 3 precursor protein_id : NP_081182.2

name	EG623505 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82952669 GeneID:623505 MGI:3644667
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_893065.1

name	LOC673332 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264256 GeneID:673332
definition	codon_start : 1 product : similar to CDNA sequence BC012278 protein_id : XP_001476311.1

name	BC052688 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82952763 GeneID:432812 MGI:3583898
definition	codon_start : 1 product : similar to RIKEN cDNA 8430426H19 gene isoform 1 protein_id : XP_893567.1

name	LOC218274 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:218274
definition	number : 1 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 8 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 7 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 6 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 5 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 4 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 3 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 2 pseudo : _no_value

name	LOC435362 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435362
definition	number : 1 pseudo : _no_value

name	EG638502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638502
definition	number : 1 pseudo : _no_value

name	EG638502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:638502
definition	number : 2 pseudo : _no_value

name	LOC100041382 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041382
definition	number : 1 pseudo : _no_value

name	LOC100041382 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041382
definition	number : 2 pseudo : _no_value

name	LOC100041382 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041382
definition	number : 3 pseudo : _no_value

name	LOC100041382 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041382
definition	number : 4 pseudo : _no_value

name	LOC665717 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264273 GeneID:665717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 39 ESTs, 7 Proteins product : similar to protein-tyrosine-phosphatase pseudo : _no_value transcript_id : XR_001777.2

name	EG665401 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149264274 GeneID:665401 MGI:3647115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 61 ESTs, 6 Proteins product : predicted gene, EG665401 pseudo : _no_value transcript_id : XR_033251.1

name	LOC624140 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264254 GeneID:624140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to Proteasome subunit alpha type 2 (Proteasome component C3) (Macropain subunit C3) (Multicatalytic endopeptidase complex subunit C3) pseudo : _no_value transcript_id : XR_032627.1

name	LOC665415 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264276 GeneID:665415
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 82 ESTs, 1 Protein product : similar to RIKEN cDNA 4933434E20 gene pseudo : _no_value transcript_id : XR_033259.1

clone name	MSMg01-360L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-232A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114I14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-275G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350G12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-449H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382I13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-530O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066P14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-064N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-318I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353B03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-435P07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505K07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-339K13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424M20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-447I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-092L02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-135G16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-270E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-279N03.b	B6Ng01-279N03.g
ACC	GA079701	GA079702
length	1,166	1,166
definition	B6Ng01-279N03.b	B6Ng01-279N03.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcctgaaatttttaattagactttcagacaattgttgagagagtac acttaaaacctgaggaacaaaacataataaaggatggaatactgattcta tattgaaacgaccactcacactcttctctgaacaccagcacacagttaat tatgccttcacacagaactatgtcttatccacctaacaatttgccttcac aaaacctgaaagaaaccagaacactgccttttgaatagttttattttaaa gatatagacttgcatcttctttttaaattttaaatttaaaaatgattctg aaggtcatttatataaatgagttgagagcatggattaaggtaatggtaag gttttattagtgtgaacatgttttggatttcatatcatagtatatattta agggacttgagtgcaggatcccacttgtcaggggatactgaattggggaa gtccctgctgtttttgcttgcccttgccccagttcagatcttctttttca ccatcaggcagttcatatgttggggcagagatttcttagacaatggcaca gtggctgtttcgctcgttgcctaacttcatactgctgtccatgttactgt ggctggaaggaaagcacatgttgcatcaattagaaaaaaatgtagctcag tggctttatcatagtatctcctggaatgtccgcccttcaagggcactagc catgtctaaagctcagtaagcagtacatgtaccatgagcaagaagggaag gtagtcacctacaaccacatatcaactccagccacattgtatggagcaga acacttagacagtggactgcatgttgtcccatagctgatataaatgaggg cttcagttccttcttggcttccatgtgggaatgtgacactgtcatacctg atttggtacaaaaaacccatcgccactctctgtgtaatcctcaaattcag gtcatcacaactggctgtggttgttttcctcctcttcaaacattgggtgt aaaaacagtagtcattatttttcatgagttcttcatcagtcttcatggga aaagcaaataaaaagttgaaaacctaacaggactacctgtaagttctgaa gtggaaggaaatagtaactgttacagtcaacttacctagctgaaccggag gcacctcactttctat	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcataatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtttggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaaaatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatgtactcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcatg aagaatgaagactgaagtgtggacactatgcccctccttagattcggcaa caaaacacccatggaaggtgttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac acagaagtggatgctcacagtcagctaatggatggaccatatggctccca atggaggagctagagaaagtagccagagctaaagggatctgcaaccctat agtgaacacattatgactaacagtacccggagccctgactctagctgcat attatatcaaagatgcttagtcgcatcacctggaaagagagtccattgaa cttgcaaacctttaatgccagtacagtacatccatgccaaaatggggaat tggtgtgtggtcgcag
quality values	Open. Hide. 58 31 27 31 58 62 62 47 62 47 62 30 38 62 62 62 47 62 62 62 54 47 54 62 62 62 62 62 41 37 62 62 59 39 45 59 59 62 62 62 62 62 62 62 62 62 62 62 49 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 32 54 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 47 62 62 62 62 62 56 62 49 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 62 49 47 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 54 46 54 58 58 54 58 58 54 58 58 58 58 58 52 46 44 58 54 58 58 54 48 58 54 58 52 58 58 54 54 58 54 58 58 58 58 58 58 58 58 54 58 52 58 39 32 30 58 58 54 58 58 52 50 58 54 54 58 52 58 58 54 54 54 58 53 58 58 58 58 58 58 58 58 58 49 53 58 58 53 58 58 58 58 54 58 47 51 58 51 58 58 51 53 54 48 47 58 58 58 58 58 49 50 49 50 54 58 58 51 49 51 58 58 49 51 58 50 51 58 58 49 51 19 58 54 58 58 50 49 50 50 50 54 58 53 52 54 44 44 51 50 50 42 54 51 47 37 58 58 58 58 58 58 50 40 58 52 51 40 54 54 52 51 37 50 58 33 50 52 58 51 52 50 50 50 53 52 37 53 53 52 52 53 49 44 44 54 39 33 33 37 54 32 49 54 41 44 37 35 47 50 38 39 39 39 54 49 35 44 49 42 42 32 50 49 32 42 54 52 45 41 26 54 46 37 45 54 37 47 38 42 37 34 35 46 37 41 43 32 37 32 52 51 46 37 46 44 38 53 37 54 32 53 31 32 37 54 22 6 49 38 32 31 14 46 26 43 42 32 40 31 36 33 45 36 52 30 35 41 40 31 52 29 47 32 52 32 31 37 47 42 31 31 23 40 42 46 26 40 26 26 33 33 30 34 30 33 34 37 30 42 43 33 51 30 27 34 31 32 45 38 25 33 32 30 42 23 22 42 29 24 32 43 30 31 31 42 31 31 41 28 31 46 28 24 27 30 21 30 31 32 31 19 31 31 31 47 34 31 37 43 31 47 31 29 31 36 34 30 29 42 42 33 42 31 31 30 30 32 32 15 26 41 41 31 30 19 31 38 32 38 46 31 41 28 32 31 30 36 30 23 25 28 31 37 26 31 26 31 30 21 17 27 31 38 30 47 19 21 29 21 25 31 26 43 44 44 42 32 15 33 16 17 29 31 14 12 15 18 23 38 38 31 28 31 31 21 29 32 18 15 27 24 16 14 14 31 48 35 32 33 27 4 5 4 13 18 20 32 21 43 8 11 9 25 21 27 28 12 15 12 8 15 26 15 29 27 20 47 47 32 11 26 19 10 25 17 23 22 32 27 17 39 19 9 6 19 14 32 36 24 8 19 26 23 38 30 40 9 11 21 22 18 27 21 27 27 24 24 11 13 14 47 40 30 13 9 20 24 23 25 13 21 10 28 17 21 28 11 24 16 15 9 10 18 8 20 8 14 18 20 40 9 3 29 40 27 15 22 16 40 20 10 9 27 40 28 19 5 7 6 7 12 27 11 18 5 13 19 13 19 18 6 6 7 18 12 10 23 5 9 19 15 11 12 14 4 6 5 6 7 6 11 18 4 3 5 6 15 13 9 5 23 15 8 20 12 4 9 6 14 5 5 12 5 7 4 12 13 5 6 6 10 5 5 3 17 5 13 7 8 9 4 5 9 6 5 4 8 10 4 1 4 8 22 7 5 6 4 12 8 4 4 17 9 8 6 4 6 5	Open. Hide. 62 47 56 47 62 62 62 47 51 54 62 62 35 20 28 62 44 59 44 62 59 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 59 62 62 59 54 49 49 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 54 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 54 54 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 49 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 41 62 62 62 62 62 62 54 62 62 62 62 62 62 46 46 38 38 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 54 58 45 58 58 58 58 58 58 58 54 45 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 52 58 58 58 58 58 54 47 58 58 58 46 58 58 58 58 42 39 58 58 52 58 54 58 53 58 58 58 58 58 54 41 58 58 47 35 58 50 58 51 58 52 58 58 58 58 53 53 51 48 58 58 51 58 58 49 51 53 58 52 54 54 54 50 58 54 54 51 58 58 51 58 58 54 50 54 58 58 41 50 58 58 50 54 58 49 51 40 50 49 48 58 51 58 58 58 54 31 58 50 50 58 44 49 35 58 33 33 50 40 58 58 38 54 53 51 34 49 50 51 58 50 49 34 42 43 43 43 51 58 58 54 53 53 42 58 52 52 39 50 45 54 54 38 33 39 41 53 52 42 49 54 51 51 30 54 44 34 54 42 51 42 41 32 50 54 40 40 32 53 54 52 54 41 52 32 37 46 53 53 53 53 49 33 33 35 39 42 49 37 49 37 32 40 34 37 42 40 53 32 37 53 52 42 54 54 44 47 37 51 54 42 35 37 41 49 32 52 13 46 31 53 32 41 31 52 34 35 44 16 31 32 31 52 47 32 37 53 47 52 32 53 22 32 47 31 46 13 26 28 31 53 53 42 30 42 32 24 45 45 31 12 18 29 31 32 32 32 30 42 30 30 31 31 42 32 40 28 42 31 31 31 30 31 31 51 36 12 33 29 42 25 26 37 46 32 31 38 31 35 32 32 33 34 36 36 43 31 33 34 48 31 31 34 38 31 30 41 19 19 31 31 28 32 31 31 31 24 37 31 30 26 37 35 34 33 32 24 32 31 31 27 48 46 36 31 27 24 28 33 48 35 27 31 31 23 41 19 22 21 26 22 38 38 33 28 32 36 29 27 32 30 17 18 38 31 31 32 42 24 26 16 33 32 33 19 18 31 15 43 41 17 5 7 31 28 9 20 18 41 38 24 22 33 35 21 33 26 24 27 33 15 19 19 31 33 23 31 28 32 32 32 22 31 27 27 34 32 17 25 20 20 26 12 20 22 23 19 14 24 31 31 9 4 5 11 20 24 21 31 23 5 16 25 22 23 5 10 19 24 9 32 26 20 8 11 6 18 34 18 11 18 15 18 15 15 5 3 3 12 28 27 13 40 11 13 40 15 6 10 20 15 24 27 16 9 21 22 15 13 11 12 6 13 10 25 17 11 8 27 8 8 27 19 15 17 7 25 7 16 15 18 25 10 13 21 20 21 26 22 11 10 26 5 16 20 13 7 9 14 12 10 9 18 16 19 21 22 12 15 5 11 5 7 7 4 12 12 18 7 18 30 20 10 14 6 3 3 1 8 18 5 10 6 3 3 3 6 10 6 4 8 7 7 3 3 11 5 4 7 4 11 5 3 7 14 9 9 4 7 5 6 13 13 15 8 20 16 25 25 4 6 17 10 6 6 5 19 5 3 7 4 4 3 4 5 4 5 1 3 4 4 4 7 22 6 4 5 2 2 10 29 17 5 1 5 3 13 8 18 4 6 7 9 10 5 14 4 6 8 5 17 4 5 2 2 3 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_61040374_61041536
seq2: B6Ng01-279N03.b_47_1212

seq1  GAATTCCTGAAATTTTTAATTAGACTTTCAGACAATTGTTGAGAGAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAATTTTTAATTAGACTTTCAGACAATTGTTGAGAGAGTAC  50

seq1  ACTTAAAACCTGAGGAACAAAACATAATAAAGGATGGAATACTGATTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAACCTGAGGAACAAAACATAATAAAGGATGGAATACTGATTCTA  100

seq1  TATTGAAACGACCACTCACACTCTTCTCTGAACACCAGCACACAGTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAACGACCACTCACACTCTTCTCTGAACACCAGCACACAGTTAAT  150

seq1  TATGCCTTCACACAGAACTATGTCTTATCCACCTAACAATTTGCCTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTCACACAGAACTATGTCTTATCCACCTAACAATTTGCCTTCAC  200

seq1  AAAACCTGAAAGAAACCAGAACACTGCCTTTTGAATAGTTTTATTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGAAAGAAACCAGAACACTGCCTTTTGAATAGTTTTATTTTAAA  250

seq1  GATATAGACTTGCATCTTCTTTTTAAATTTTAAATTTAAAAATGATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGACTTGCATCTTCTTTTTAAATTTTAAATTTAAAAATGATTCTG  300

seq1  AAGGTCATTTATATAAATGAGTTGAGAGCATGGATTAAGGTAATGGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATTTATATAAATGAGTTGAGAGCATGGATTAAGGTAATGGTAAG  350

seq1  GTTTTATTAGTGTGAACATGTTTTGGATTTCATATCATAGTATATATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTAGTGTGAACATGTTTTGGATTTCATATCATAGTATATATTTA  400

seq1  AGGGACTTGAGTGCAGGATCCCACTTGTCAGGGGATACTGAATTGGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTTGAGTGCAGGATCCCACTTGTCAGGGGATACTGAATTGGGGAA  450

seq1  GTCCCTGCTGTTTTTGCTTGCCCTTGCCCCAGTTCAGATCTTCTTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCTGTTTTTGCTTGCCCTTGCCCCAGTTCAGATCTTCTTTTTCA  500

seq1  CCATCAGGCAGTTCATATGTTGGGGCAGAGATTTCTTAGACAATGGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGGCAGTTCATATGTTGGGGCAGAGATTTCTTAGACAATGGCACA  550

seq1  GTGGCTGTTTCGCTCGTTGCCTAACTTCATACTGCTGTCCATGTTACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGTTTCGCTCGTTGCCTAACTTCATACTGCTGTCCATGTTACTGT  600

seq1  GGCTGGAAGGAAAGCACATGTTGCATCAATTAGAAAAAAATGTAGCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAAGGAAAGCACATGTTGCATCAATTAGAAAAAAATGTAGCTCAG  650

seq1  TGGCTTTATCATAGTATCTCCTGGAATGTCCGCCCTTCAAGGGCACTAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTATCATAGTATCTCCTGGAATGTCCGCCCTTCAAGGGCACTAGC  700

seq1  CATGTCTAAAGCTCAGTAAGCAGTACATGTACCATGAGCAAGAAGGGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTAAAGCTCAGTAAGCAGTACATGTACCATGAGCAAGAAGGGAAG  750

seq1  GTAGTCACCTACAACCACATATCAACTCCAGCCACATTGTATGGAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCACCTACAACCACATATCAACTCCAGCCACATTGTATGGAGCAGA  800

seq1  ACACTTAGACAGTGGACTGCATGTTGTCCCATAGCTGATATAAATGAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAGACAGTGGACTGCATGTTGTCCCATAGCTGATATAAATGAGGG  850

seq1  CTTCAGTTCCTTCTTGGCTTCCATGTGGGAATGTGACACTGTCATACCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTCCTTCTTGGCTTCCATGTGGGAATGTGACACTGTCATACCTG  900

seq1  ATTTGGTACAAAAAACCCATCGCCACTCTCTGTGTAATCCTCAAATTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTGGTACAAAAAACCCATCGCCACTCTCTGTGTAATCCTCAAATTCA-  949

seq1  GGTCATCAACAACTGGCTGTGGTTTGTTTTCCTCCTCTTCAAACATTGGG  1000
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  GGTCATC-ACAACTGGCTGTGG-TTGTTTTCCTCCTCTTCAAACATTGGG  997

seq1  TGT-AAAACAGTAGTCATTA-TTTTCATGAGTTCTTCATCAGTCTTCATG  1048
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTAAAAACAGTAGTCATTATTTTTCATGAGTTCTTCATCAGTCTTCATG  1047

seq1  GGAAAAGCAAATAAAAAGTTGAAAA-CTAACA-GACTAACTGTAAAGTTC  1096
      ||||||||||||||||||||||||| |||||| ||||| |||| ||||||
seq2  GGAAAAGCAAATAAAAAGTTGAAAACCTAACAGGACTACCTGT-AAGTTC  1096

seq1  TGAAGTG--AAGAAATAGTTAAACTGTACAAGTCAAACTTA-CTAGCTG-  1142
      |||||||  | ||||||||  ||||||   |||| |||||| ||||||| 
seq2  TGAAGTGGAAGGAAATAGT--AACTGTTACAGTC-AACTTACCTAGCTGA  1143

seq1  ACCGGAGGCA-CTCA-TTTCTAT  1163
      |||||||||| |||| |||||||
seq2  ACCGGAGGCACCTCACTTTCTAT  1166

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information