MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-280B23
Chromosome	13 (Build37)
Map Location	96,564,981 - 96,565,923
singlet/doublet	singlet
Overlap gene	Iqgap2
Upstream gene	Tbca, Otp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, F2rl2
Downstream gene	Sv2c, LOC667582, 1200014M14Rik, 9330128J19Rik, Polk, Col4a3bp, Hmgcr, LOC100039456, LOC625662
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tbca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21371 MGI:107549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Otp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18420 MGI:99835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218460 MGI:2445123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218461 MGI:2443999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbed3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72114 MGI:1919364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aggf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66549 MGI:1913799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crhbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12919 MGI:88497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	S100z (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268686 MGI:2685471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2rl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14063 MGI:101910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14062 MGI:101802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqgap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:544963 MGI:2449975
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F2rl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14064 MGI:1298208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sv2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75209 MGI:1922459
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 9 Proteins

name	LOC667582 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 ESTs, 5 Proteins pseudo : _no_value

name	1200014M14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67463 MGI:1914713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9330128J19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271144 MGI:2444730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27015 MGI:1349767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col4a3bp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68018 MGI:1915268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgcr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15357 MGI:96159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039456 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC625662 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625662
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Tbca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130449 GeneID:21371 MGI:107549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin cofactor a transcript_id : NM_009321.2

name	Otp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368132 GeneID:18420 MGI:99835
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : orthopedia homolog (Drosophila) transcript_id : NM_011021.2

name	Wdr41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123702000 GeneID:218460 MGI:2445123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 41 transcript_id : NM_172590.2

name	Pde8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986552 GeneID:218461 MGI:2443999
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 8B transcript_id : NM_172263.1

name	Zbed3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354003 GeneID:72114 MGI:1919364
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, BED domain containing 3 transcript_id : NM_028106.2

name	Aggf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328274 GeneID:66549 MGI:1913799
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiogenic factor with G patch and FHA domains 1 transcript_id : NM_025630.2

name	Crhbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352317 GeneID:12919 MGI:88497
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : corticotropin releasing hormone binding protein transcript_id : NM_198408.2

name	S100z (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487214 GeneID:268686 MGI:2685471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S100 calcium binding protein, zeta transcript_id : NM_001081159.1

name	F2rl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349952 GeneID:14063 MGI:101910
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor-like 1 transcript_id : NM_007974.3

name	F2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892391 GeneID:14062 MGI:101802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor transcript_id : NM_010169.3

name	Iqgap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118344443 GeneID:544963 MGI:2449975
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IQ motif containing GTPase activating protein 2 transcript_id : NM_027711.1

name	F2rl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367856 GeneID:14064 MGI:1298208
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coagulation factor II (thrombin) receptor-like 2 transcript_id : NM_010170.3

name	Sv2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395625 GeneID:75209 MGI:1922459
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 9 Proteins product : synaptic vesicle glycoprotein 2c transcript_id : XM_991257.1

name	1200014M14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27229042 GeneID:67463 MGI:1914713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200014M14 gene transcript_id : NM_026173.2

name	9330128J19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111607474 GeneID:271144 MGI:2444730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9330128J19 gene transcript_id : NM_001042714.1

name	Polk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129937 GeneID:27015 MGI:1349767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), kappa transcript_id : NM_012048.2

name	Col4a3bp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963670 GeneID:68018 MGI:1915268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type IV, alpha 3 (Goodpasture antigen) binding protein transcript_id : NM_023420.1

name	Hmgcr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56119095 GeneID:15357 MGI:96159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-hydroxy-3-methylglutaryl-Coenzyme A reductase transcript_id : NM_008255.1

name	LOC625662 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264621 GeneID:625662
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : similar to ankyrin repeat domain 11 transcript_id : XM_127483.7

name	Tbca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678225 CCDS:CCDS26694.1 GeneID:21371 MGI:107549
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0007022 - chaperonin-mediated tubulin folding [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : cofactor A; co-chaperonin associated with a- & b-tubulin product : tubulin cofactor a protein_id : NP_033347.1

name	Otp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754958 CCDS:CCDS26695.1 GeneID:18420 MGI:99835
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : orthopedia homolog protein_id : NP_035151.1

name	Wdr41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123702001 GeneID:218460 MGI:2445123
definition	codon_start : 1 product : WD repeat domain 41 protein_id : NP_766178.2

name	Pde8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986553 GeneID:218461 MGI:2443999
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0000156 - two-component response regulator activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphodiesterase 8B protein_id : NP_758467.1

name	Zbed3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312432 CCDS:CCDS26696.1 GeneID:72114 MGI:1919364
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : zinc finger, BED domain containing 3 protein_id : NP_082382.1

name	Aggf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328275 CCDS:CCDS26697.1 GeneID:66549 MGI:1913799
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005576 - extracellular region [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0043499 - eukaryotic cell surface binding [Evidence ISS]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0007155 - cell adhesion [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045766 - positive regulation of angiogenesis [Evidence ISS]; GO:0001938 - positive regulation of endothelial cell proliferation [Evidence ISS]; GO:0006396 - RNA processing [Evidence ISS]; GO:0001570 - vasculogenesis [Evidence ISS] codon_start : 1 product : angiogenic factor with G patch and FHA domains 1 protein_id : NP_079906.2

name	Crhbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259188 CCDS:CCDS26698.1 GeneID:12919 MGI:88497
definition	GO_function : GO:0017047 - adrenocorticotropin-releasing hormone binding [Evidence IDA] GO_process : GO:0042445 - hormone metabolism [Evidence IDA] codon_start : 1 product : corticotropin releasing hormone binding protein protein_id : NP_940800.1

name	S100z (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487215 GeneID:268686 MGI:2685471
definition	codon_start : 1 product : S100 calcium binding protein, zeta protein_id : NP_001074628.1

name	F2rl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982850 CCDS:CCDS26700.1 GeneID:14063 MGI:101910
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Protease-activated receptor-2 product : coagulation factor II (thrombin) receptor-like 1 protein_id : NP_032000.2

name	F2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165402 CCDS:CCDS26701.1 GeneID:14062 MGI:101802
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0015057 - thrombin receptor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : thrombin receptor product : coagulation factor II (thrombin) receptor protein_id : NP_034299.2

name	Iqgap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118344444 GeneID:544963 MGI:2449975
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005099 - Ras GTPase activator activity [Evidence IEA] GO_process : GO:0046580 - negative regulation of Ras protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : Ras GTPase-activating-like protein product : IQ motif containing GTPase activating protein 2 protein_id : NP_081987.1

name	F2rl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27819641 CCDS:CCDS26702.1 GeneID:14064 MGI:1298208
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : protease-activated receptor 3 product : coagulation factor II (thrombin) receptor-like 2 protein_id : NP_034300.2

name	Sv2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94395626 GeneID:75209 MGI:1922459
definition	codon_start : 1 product : synaptic vesicle protein 2C protein_id : XP_996351.1

name	1200014M14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385682 CCDS:CCDS26703.1 GeneID:67463 MGI:1914713
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC67463 protein_id : NP_080449.1

name	9330128J19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111607475 GeneID:271144 MGI:2444730
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC271144 protein_id : NP_001036179.1

name	Polk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753636 CCDS:CCDS26704.1 GeneID:27015 MGI:1349767
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016450 - kappa DNA polymerase activity [Evidence TAS]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IMP]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 note : DNA damage-inducible protein b; DinB homolog 1 product : polymerase (DNA directed), kappa protein_id : NP_036178.1

name	Col4a3bp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963671 CCDS:CCDS26705.1 GeneID:68018 MGI:1915268
definition	GO_function : GO:0016301 - kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 function : phosphorylates the Goodpasture autoantigen note : collagen, type IV, alpha 3 (Goodpasture antigen) binding protein product : procollagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein_id : NP_075909.1

name	Hmgcr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56119096 CCDS:CCDS26706.1 GeneID:15357 MGI:96159
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA]; GO:0006695 - cholesterol biosynthesis [Evidence IDA]; GO:0009790 - embryonic development [Evidence IMP]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 3-hydroxy-3-methylglutaryl-CoA reductase product : 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein_id : NP_032281.1

name	LOC100039456 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039456
definition	number : 3 pseudo : _no_value

name	LOC100039456 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039456
definition	number : 2 pseudo : _no_value

name	LOC100039456 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039456
definition	number : 1 pseudo : _no_value

name	LOC667582 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264620 GeneID:667582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 ESTs, 5 Proteins product : similar to EAP30 subunit of ELL complex pseudo : _no_value transcript_id : XR_030871.1

clone name	MSMg01-365M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-280B23.b	B6Ng01-280B23.g
ACC	GA079931	GA079932
length	942	1,195
definition	B6Ng01-280B23.b	B6Ng01-280B23.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttagagggtacagaagacatcatagaaagacaaaccaacagaa aagatttttttttaagttaatgagcatatcacttaattttacgacttagc atagcattggtgagaaacccagatcaaccagaagggatagagtccagaca cagtcaactgagtttttgcaaagatattaaaacaactccgggaagaaagg ccagcctttccaaccatgtgctggcacagttaaaagtccacgcgtgaaac caacgaacctcaggtgctgccttaagttatatccaaaaaaataactcgcc agctgtgcgataactcgccagctgtgacagcgcacccctgtaatcctagt gcttgggaagctgaggcaggagaattaggagttcaagtccagccagggct acatagcaaacctcggtctccaaaataaaatcaaaataaagtaactcaag ctggtatcagagtgaagcataaggctaccaaagctgttagagattgacat ggaatctccagacctcggaccaggcaaatagattttagatatgacaacaa aatccaagccataaagggggggggggagatagttgacaaactggacttca ccaaaaactcaagacatttactcccaacaaaggacccatatttaaagatt tggagaaccacaaaggtcaacaacagagaatctaggctttctttaaaaat gagcaaagtgtttcagacccctacagggcgtgcacatggaaagatctgcc acagaggaaatgcaccaaacaagctctcctggctgcaaccacacatctgc cggaaccacgcagacaacacacatggaacacctgcagacatccagtgaat cgaagtgcagacagccaggaggtggtcatccagaaaaaggtagacaagct cctgtcaacagggagtcacagactttcccttatgacccagaa	gaattctctgattggctttaataaaaatctgacggccaattagctgggca ggaaatggaaggcgggacttccttggaggaagacaggaactctgggaaga agaaagaggaaagctttgcgcctggagggatggtaggagaaactggtatg actacaagccggaaaggtatacctggccatgtggctggatgaggctaggt gtttgggttaatttagatgaactagttgagagtctgcccagctaaggctt aagctttaaaatagtacaaggtttctatgtggttgtttgggggaactgac tggttaaggaataactgctatcatgttaattctcagcattaatgaatata cagataatattcattttacagattagggtgaaattcccaaccatttctga aatggccctaaacacacttctgctatttcatactgaaaggaaataaacct tgagacctgtgattcatgtaatttatgtcaaatagcccaaagagttgttt gtgagctttaaaacctggggctgagaacatagcagaacaggccaggtcat gcccaggcaggcccatcgtcacatgtcctgactggcctagtacctcccta tctcccgcccttctgacagtctgttgatgtttaaatggaccaatcatgta aaaccgcgccaattcctcccccagccccaccccttttctataaaaacccc aagcttccaagcctcggggtcgaaaccactgtctcctatgtgagatacgt ttcgaaccggagctccgccattatggctccaccatgtggttgacacctct gtctcctgtgggagatatgtgtcggcccggagctccgtcattaaactacc tcatgcttttacaacaagatggtcgtctgttcgtgattcctggtgcgcgc cgaatcgagaattgagtgggggtttcccccactaggttctttcaatacta catattcttttgtgaagcaacattttcagtgttgataattacaatcaatt caccaagaaaattatgaaagtactttactacatgtcagatacctatgaga tttaattctggtgcatgtgtgggtggagacaaagttgagatggtcttctt ccattgtcctacctattttttaagaacaatgattctccacgaacctagct tcagctattggccttaaccctggccgtctgagaacgcgctaatac
quality values	Open. Hide. 58 33 52 35 58 58 58 58 42 48 62 62 62 62 47 27 42 56 39 62 62 62 62 47 42 62 54 47 62 62 51 26 32 27 32 34 28 32 33 33 38 38 28 29 50 59 59 62 62 62 62 43 62 59 47 62 62 62 62 62 54 62 54 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 42 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 56 56 62 62 52 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 33 47 42 58 54 58 58 58 54 50 32 58 52 52 52 52 54 58 54 54 52 45 49 47 45 37 52 52 52 52 52 52 41 28 28 39 58 46 50 54 54 54 52 46 54 52 52 48 46 54 52 23 54 52 48 52 36 25 41 42 52 52 52 54 58 43 54 52 52 48 38 34 49 51 58 58 54 50 58 22 19 35 47 42 40 34 41 47 58 41 39 37 33 30 25 29 48 29 41 58 40 58 38 50 39 36 41 24 25 48 53 51 41 32 46 58 30 18 50 42 41 39 39 51 49 50 46 32 48 41 51 32 51 51 33 39 32 32 21 58 19 37 40 38 41 43 46 23 28 28 32 26 37 50 58 40 40 35 18 50 50 42 33 52 42 42 39 42 53 45 42 29 40 32 37 39 46 32 9 50 54 51 49 37 53 32 32 53 22 6 34 6 31 42 25 36 46 32 32 33 23 38 31 34 28 31 32 37 28 18 31 31 35 33 35 25 40 37 44 42 40 45 32 27 11 32 33 30 33 47 29 32 29 32 9 6 9 7 10 25 33 16 34 21 22 25 34 34 33 18 25 31 35 33 51 31 42 34 30 20 30 21 15 33 22 31 27 26 28 43 23 32 42 35 14 22 32 17 31 31 15 12 18 20 15 30 25 26 28 9 12 15 26 7 46 13 37 34 9 30 22 13 41 14 22 13 46 42 46 48 31 34 25 25 23 7 6 8 7 15 12 23 14 12 8 14 31 13 16 14 20 18 15 6 31 8 22 13 39 9 9 14 25 12 31 31 38 29 29 25 28 21 7 12 9 12 17 32 25 29 19 7 5 9 29	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr13_96564981_96565923
seq2: B6Ng01-280B23.b_45_986

seq1  GAATTCTTTAGAGGGTACAGAAGACATCATAGAAAGACAAACCAACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGAGGGTACAGAAGACATCATAGAAAGACAAACCAACAGAA  50

seq1  AAGATTTTTTTTTAAGTTAATGAGCATATCACTTAATTTTACGACTTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTTTTTAAGTTAATGAGCATATCACTTAATTTTACGACTTAGC  100

seq1  ATAGCATTGGTGAGAAACCCAGATCAACCAGAAGGGATAGAGTCCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTGGTGAGAAACCCAGATCAACCAGAAGGGATAGAGTCCAGACA  150

seq1  CAGTCAACTGAGTTTTTGCAAAGATATTAAAACAACTCCGGGAAGAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAACTGAGTTTTTGCAAAGATATTAAAACAACTCCGGGAAGAAAGG  200

seq1  CCAGCCTTTCCAACCATGTGCTGGCACAGTTAAAAGTCCACGCGTGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTTTCCAACCATGTGCTGGCACAGTTAAAAGTCCACGCGTGAAAC  250

seq1  CAACGAACCTCAGGTGCTGCCTTAAGTTATATCCAAAAAAATAACTCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGAACCTCAGGTGCTGCCTTAAGTTATATCCAAAAAAATAACTCGCC  300

seq1  AGCTGTGCGATAACTCGCCAGCTGTGACAGCGCACCCCTGTAATCCTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCGATAACTCGCCAGCTGTGACAGCGCACCCCTGTAATCCTAGT  350

seq1  GCTTGGGAAGCTGAGGCAGGAGAATTAGGAGTTCAAGTCCAGCCAGGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGAAGCTGAGGCAGGAGAATTAGGAGTTCAAGTCCAGCCAGGGCT  400

seq1  ACATAGCAAACCTCGGTCTCCAAAATAAAATCAAAATAAAGTAACTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCAAACCTCGGTCTCCAAAATAAAATCAAAATAAAGTAACTCAAG  450

seq1  CTGGTATCAGAGTGAAGCATAAGGCTACCAAAGCTGTTAGAGATTGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATCAGAGTGAAGCATAAGGCTACCAAAGCTGTTAGAGATTGACAT  500

seq1  GGAATCTCCAGACCTCGGACCAGGCAAATAGATTTTAGATATGACAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCCAGACCTCGGACCAGGCAAATAGATTTTAGATATGACAACAA  550

seq1  AATCCAAGCCATAAAGGGGGGGGGGGAGATAGTTGACAAACTGGACTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGCCATAAAGGGGGGGGGGGAGATAGTTGACAAACTGGACTTCA  600

seq1  CCAAAAACTCAAGACATTTACTCCCAACAAAGGACCCATATTTAAAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAACTCAAGACATTTACTCCCAACAAAGGACCCATATTTAAAGATT  650

seq1  TGGAGAACCACAAAGGTCAACAACAGAGAATCTAGGCTTTCTTTAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACCACAAAGGTCAACAACAGAGAATCTAGGCTTTCTTTAAAAAT  700

seq1  GAGCAAAGTGTTTCAGACCCCTACAGGGCGTGCACATGGAAAGATCTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAGTGTTTCAGACCCCTACAGGGCGTGCACATGGAAAGATCTGCC  750

seq1  ACAGAGGAAATGCACC-AACAAGCTCTCCTGGCTGCAACCACACATCTGC  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAGAGGAAATGCACCAAACAAGCTCTCCTGGCTGCAACCACACATCTGC  800

seq1  CGGAACCACGCAGACAAACACACATGGAACACCTGCAGACATCCAGTGAA  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CGGAACCACGCAGAC-AACACACATGGAACACCTGCAGACATCCAGTGAA  849

seq1  TCGAAGTGCAAGACAGCCAGGAGGTGGTCATCCCAGAAAAAGGTTAGACA  899
      ||||||||| ||||||||||||||||||||| ||||||||||| ||||||
seq2  TCGAAGTGC-AGACAGCCAGGAGGTGGTCAT-CCAGAAAAAGG-TAGACA  896

seq1  AGCTCCTGTCAACA-GGAGTCACAGACTTTCCC-TATGACCCAGAA  943
      |||||||||||||| |||||||||||||||||| ||||||||||||
seq2  AGCTCCTGTCAACAGGGAGTCACAGACTTTCCCTTATGACCCAGAA  942

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information