BAC Information

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BAC

Clone NameB6Ng01-281F10
Chromosome13 (Build37)
Map Location 21,634,336 - 21,735,734
singlet/doubletdoublet
Overlap geneOlfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11
Upstream geneElmo1, LOC100040226, LOC665381, LOC665386, Aoah, Olfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366
Downstream geneOlfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj, LOC665690, V1rh17, V1rh2, V1ri8, LOC632534, V1ri1, V1ri9, OTTMUSG00000000480, V1ri6, LOC665726, V1rh21, V1ri3, V1rh4, V1rh3, V1rh1, LOC665749, V1ri4, V1ri7, V1rh11, OTTMUSG00000000494, V1rh8, V1rh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281F10.bB6Ng01-281F10.g
ACCGA080844GA080845
length1,1421,142
definitionB6Ng01-281F10.b B6Ng01-281F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,734,578 - 21,735,734)(21,634,336 - 21,635,479)
sequence
gaattcttttcttttctctacactaatacaatcctgaatgggagtaaaat
acttaagattatatttagatcatttacctcataaatgacattgtgctgtt
ttttcttctatcacattattttcgtacttaacaatatcacacttgaatcc
ttctggtttctaatgattataacttgatccattccctgtggaggggagag
agagagatcttccctccacactttgtcattacaaacatttcttcaataaa
atgtttgctttagtccatctttacaagtcagaaattcattttacaagtta
gatttccatgagcgagaattgctagagtaacagatatacttgttagacat
ttttttctattcacttctagaatgttctgtgagtactcatttctccttca
gtggcactggtgacatgagtcactgctgactgctttttcttacgggacag
atgactttccattgttacttactatacttactatagataatagtatagaa
gataatataatagaaaagggctaacaatattatctacagtttctggagta
ataagacaagcatactttatttttctcatacccattcatttgaaaaagta
atatgaggctatatataaaatatatcttaattagaggagattattggaaa
tataaatcaaaattttaagtttttaataactgtataaaaatgcattgagc
agagaaagagagcttaactaagcaaaacctatggaagaaaataattattt
agatatgtgggaagccaggcatggtggtgcacgcctttaatcccagcact
tgggaggcagggggcaggcagatttctgagtttgaggccagcctggtcta
caaagtgagttccaggacagccaggctacagagaaaccctgtctcgaaaa
cccaaaaaaaaaaaaaaaaaagaatagatatgtggggaagcaaagtatcc
cttgatgaattaaggtaataaagacatttccataggacattcagtgttca
ttgtataagcatgatctaaatccaattagaaacaaatgcagttctggtga
gtcgcagaattcttcttggccttcttacagagaaacaatttccttacctt
gatgccacaaagtggatcttactgcgattgagtatttcagtc
gaattctacaggtggttattaggtaccgactataggttatacaaggcctt
acctacagtctgaacttgtcttccttgtccaggaagtgacatatattcgt
cctgattttccaaatctgctcacttcccttgttcagttccatgctcactt
accaggcgatcatatgatttctttgagtgaattaacttcgaagtttcacg
tggaggtaatgaaaaatgcaaaatgtgagactgtttccctttcctcagaa
ggcacacagttgagggaagggacagtttgtaagcaggtcacaaaaggtgc
agggtgaatgtgagtgactaaaggacttctccatattaaggctcacaacc
cctttgagccctgtggggacccaatcttgatcaaagtccccgaactccag
caatcatgacttcatctcctttgtggtttcccaattgtaactgtagggac
aatactatggaagatgattccccagggagacccagagatagcatctagag
attgtttctatgcttccaagaatgctatagcttgtctctcttccccctca
aacaacaataatcacaacaacttgaggaatttcttctttagtagagttga
tcagtttccctaaatgtaggttctatgttccatgattgaacattccatta
gcattatcttcctccagcttacaaatgcctgatattcaaggacccatttt
gtgacaaaggagatgaagtaatgaatatgtagccagaaatcacatatttc
atcttattttctattccatagtactagcactaatgtaatcatggataagc
aaggccttataggctcagtgcataggttttcctggggctgatacccaagg
ttttggaaatgttctatttaacattctgtatatacatgggggaagatgaa
cagtttgtgtgggacattcttttttgttgtttttgtttttgttttttgag
acagggtttctctgtaatagccctggctgtcctggaaactcactttgtag
accaggctggcctcgaaactcagaaatcagctgcctctgcctcccagtgc
tggattaaagcatgttgccaccactccagcctgtgtggtacattcctgcc
tgtactaattcttatatgcatagctacatgtcaaaaggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21734578_21735734
seq2: B6Ng01-281F10.b_44_1185 (reverse)

seq1  GACTGAAATACTTCTACTGCAGTAAAGATTCAATTTTGTGGCATCAAGGT  50
      ||||||||||| || |  ||||| |||| || | ||||||||||||||||
seq2  GACTGAAATAC-TCAATCGCAGT-AAGA-TCCACTTTGTGGCATCAAGGT  47

seq1  -AGGAATTTGTTTCCTCTTGTAAAGAAGCCAAG-AGAATTCTGCGAACTC  98
       ||||| |||||| ||| |||||  | |||||| ||||||||||| ||||
seq2  AAGGAAATTGTTT-CTC-TGTAAGAAGGCCAAGAAGAATTCTGCG-ACTC  94

seq1  ACAGAAAACTGCATTTGTTCTAAAATTGGATTTAAGATCAATGCTTATAC  148
      ||  | ||||||||||||| |  |||||||||| ||||| ||||||||||
seq2  AC-CAGAACTGCATTTGTT-TCTAATTGGATTT-AGATC-ATGCTTATAC  140

seq1  AATGAACACTGAATGTCCTATGGAAATGTCTTTATTACCTTAATTCATCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACACTGAATGTCCTATGGAAATGTCTTTATTACCTTAATTCATCA  190

seq1  AGGGATACTTTTGCTT-CCCACATATCTATTCTTTTTTTTTTTTTTTTTT  247
      |||||||| ||||||| |||||||||||||||       |||||||||||
seq2  AGGGATAC-TTTGCTTCCCCACATATCTATTC-------TTTTTTTTTTT  232

seq1  TTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGGCTGTCCTGG  297
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  TTTTTTTGGGTTTTCGAGACAGGGTTTCTCTGTAG-CCTGGCTGTCCTGG  281

seq1  AACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTG-CC  346
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCC  331

seq1  CCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCATGCCTGGCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCATGCCTGGCTT  381

seq1  CCCACATATCTAAATAATTATTTTCTTCCATAGGTTTTGCTTAGTTAAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATATCTAAATAATTATTTTCTTCCATAGGTTTTGCTTAGTTAAGC  431

seq1  TCTCTTTCTCTGCTCAATGCATTTTTATACAGTTATTAAAAACTTAAAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCTGCTCAATGCATTTTTATACAGTTATTAAAAACTTAAAAT  481

seq1  TTTGATTTATATTTCCAATAATCTCCTCTAATTAAGATATATTTTATATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTATATTTCCAATAATCTCCTCTAATTAAGATATATTTTATATA  531

seq1  TAGCCTCATATTACTTTTTCAAATGAATGGGTATGAGAAAAATAAAGTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCATATTACTTTTTCAAATGAATGGGTATGAGAAAAATAAAGTAT  581

seq1  GCTTGTCTTATTACTCCAGAAACTGTAGATAATATTGTTAGCCCTTTTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCTTATTACTCCAGAAACTGTAGATAATATTGTTAGCCCTTTTCT  631

seq1  ATTATATTATCTTCTATACTATTATCTATAGTAAGTATAGTAAGTAACAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTATCTTCTATACTATTATCTATAGTAAGTATAGTAAGTAACAA  681

seq1  TGGAAAGTCATCTGTCCCGTAAGAAAAAGCAGTCAGCAGTGACTCATGTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTCATCTGTCCCGTAAGAAAAAGCAGTCAGCAGTGACTCATGTC  731

seq1  ACCAGTGCCACTGAAGGAGAAATGAGTACTCACAGAACATTCTAGAAGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGCCACTGAAGGAGAAATGAGTACTCACAGAACATTCTAGAAGTG  781

seq1  AATAGAAAAAAATGTCTAACAAGTATATCTGTTACTCTAGCAATTCTCGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAAAAATGTCTAACAAGTATATCTGTTACTCTAGCAATTCTCGC  831

seq1  TCATGGAAATCTAACTTGTAAAATGAATTTCTGACTTGTAAAGATGGACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAAATCTAACTTGTAAAATGAATTTCTGACTTGTAAAGATGGACT  881

seq1  AAAGCAAACATTTTATTGAAGAAATGTTTGTAATGACAAAGTGTGGAGGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACATTTTATTGAAGAAATGTTTGTAATGACAAAGTGTGGAGGG  931

seq1  AAGATCTCTCTCTCTCCCCTCCACAGGGAATGGATCAAGTTATAATCATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTCTCTCTCTCCCCTCCACAGGGAATGGATCAAGTTATAATCATT  981

seq1  AGAAACCAGAAGGATTCAAGTGTGATATTGTTAAGTACGAAAATAATGTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAGAAGGATTCAAGTGTGATATTGTTAAGTACGAAAATAATGTG  1031

seq1  ATAGAAGAAAAAACAGCACAATGTCATTTATGAGGTAAATGATCTAAATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAAAAAACAGCACAATGTCATTTATGAGGTAAATGATCTAAATA  1081

seq1  TAATCTTAAGTATTTTACTCCCATTCAGGATTGTATTAGTGTAGAGAAAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTAAGTATTTTACTCCCATTCAGGATTGTATTAGTGTAGAGAAAA  1131

seq1  GAAAAGAATTC  1157
      |||||||||||
seq2  GAAAAGAATTC  1142

seq1: chr13_21634336_21635479
seq2: B6Ng01-281F10.g_67_1208

seq1  GAATTCTACAGGTGGTTATTAGGTACCGACTATAGGTTATACAAGGCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGGTGGTTATTAGGTACCGACTATAGGTTATACAAGGCCTT  50

seq1  ACCTACAGTCTGAACTTGTCTTCCTTGTCCAGGAAGTGACATATATTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGTCTGAACTTGTCTTCCTTGTCCAGGAAGTGACATATATTCGT  100

seq1  CCTGATTTTCCAAATCTGCTCACTTCCCTTGTTCAGTTCCATGCTCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTTCCAAATCTGCTCACTTCCCTTGTTCAGTTCCATGCTCACTT  150

seq1  ACCAGGCGATCATATGATTTCTTTGAGTGAATTAACTTCGAAGTTTCACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCGATCATATGATTTCTTTGAGTGAATTAACTTCGAAGTTTCACG  200

seq1  TGGAGGTAATGAAAAATGCAAAATGTGAGACTGTTTCCCTTTCCTCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTAATGAAAAATGCAAAATGTGAGACTGTTTCCCTTTCCTCAGAA  250

seq1  GGCACACAGTTGAGGGAAGGGACAGTTTGTAAGCAGGTCACAAAAGGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACAGTTGAGGGAAGGGACAGTTTGTAAGCAGGTCACAAAAGGTGC  300

seq1  AGGGTGAATGTGAGTGACTAAAGGACTTCTCCATATTAAGGCTCACAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAATGTGAGTGACTAAAGGACTTCTCCATATTAAGGCTCACAACC  350

seq1  CCTTTGAGCCCTGTGGGGACCCAATCTTGATCAAAGTCCCCGAACTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAGCCCTGTGGGGACCCAATCTTGATCAAAGTCCCCGAACTCCAG  400

seq1  CAATCATGACTTCATCTCCTTTGTGGTTTCCCAATTGTAACTGTAGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGACTTCATCTCCTTTGTGGTTTCCCAATTGTAACTGTAGGGAC  450

seq1  AATACTATGGAAGATGATTCCCCAGGGAGACCCAGAGATAGCATCTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTATGGAAGATGATTCCCCAGGGAGACCCAGAGATAGCATCTAGAG  500

seq1  ATTGTTTCTATGCTTCCAAGAATGCTATAGCTTGTCTCTCTTCCCCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCTATGCTTCCAAGAATGCTATAGCTTGTCTCTCTTCCCCCTCA  550

seq1  AACAACAATAATCACAACAACTTGAGGAATTTCTTCTTTAGTAGAGTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAATAATCACAACAACTTGAGGAATTTCTTCTTTAGTAGAGTTGA  600

seq1  TCAGTTTCCCTAAATGTAGGTTCTATGTTCCATGATTGAACATTCCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTCCCTAAATGTAGGTTCTATGTTCCATGATTGAACATTCCATTA  650

seq1  GCATTATCTTCCTCCAGCTTACAAATGCCTGATATTCAAGGACCCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATCTTCCTCCAGCTTACAAATGCCTGATATTCAAGGACCCATTTT  700

seq1  GTGACAAAGGAGATGAAGTAATGAATATGTAGCCAGAAATCACATATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAAGGAGATGAAGTAATGAATATGTAGCCAGAAATCACATATTTC  750

seq1  ATCTTATTTTCTATTCCATAGTACTAGCACTAATGTAATCATGGATAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTTTCTATTCCATAGTACTAGCACTAATGTAATCATGGATAAGC  800

seq1  AAGGCCTTATAGGCTCAGTGCATAGGTTTTCCTGGGGCTGATACCCAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTATAGGCTCAGTGCATAGGTTTTCCTGGGGCTGATACCCAAGG  850

seq1  TTTTGGAAATGTTCTATTTAACATTCTGTATATACAT-GGGGAAGATGAA  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTGGAAATGTTCTATTTAACATTCTGTATATACATGGGGGAAGATGAA  900

seq1  CAGTTTGTGTGGGACATTCTTTTTTGTTGTTTTTGTTTTTGTTTTTTTGA  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGTTTGTGTGGGACATTCTTTTTTGTTGTTTTTGTTTTTG-TTTTTTGA  949

seq1  GACAGGGTTTCTCTGT-ATAGCCCTGGCTGTCCTGG-AACTCACTTTGTA  997
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  GACAGGGTTTCTCTGTAATAGCCCTGGCTGTCCTGGAAACTCACTTTGTA  999

seq1  GACCAGGCTGGCCTCG-AACTCAGAAATCAGCCTGCCTCTGCCTCCCCAG  1046
      |||||||||||||||| |||||||||||||| |||||||||||| |||||
seq2  GACCAGGCTGGCCTCGAAACTCAGAAATCAG-CTGCCTCTGCCT-CCCAG  1047

seq1  TGCTGGGATTAAAGGCATG-TGCCACCACTCCCAGCTGTGTGGTACATTC  1095
      |||| |||||||| ||||| ||||||||||||   |||||||||||||||
seq2  TGCT-GGATTAAA-GCATGTTGCCACCACTCCAGCCTGTGTGGTACATTC  1095

seq1  TTGCTGGTACT-ATTCTTATAATGCATAGCTTTACATGTCAAAAGGTCTG  1144
       |||  ||||| |||||||| |||||||||  ||||||||||||||||||
seq2  CTGCCTGTACTAATTCTTAT-ATGCATAGC--TACATGTCAAAAGGTCTG  1142