BAC Information

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BAC

Clone NameB6Ng01-282C22
Chromosome13 (Build37)7 (Build37)
Map Location 43,866,488 - 43,866,550140,647,613 - 140,648,730
singlet/doubletsingletsinglet
Overlap genenone
Upstream genePhactr1, Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403
Downstream geneCd83, LOC100039432, A730030A06, EG637868, EG667157, Jarid2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282C22.bB6Ng01-282C22.g
ACCGA081468GA081469
length2051,123
definitionB6Ng01-282C22.b B6Ng01-282C22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(43,866,488 - 43,866,550)(140,647,613 - 140,648,730)
sequence
ctccgctccctgattccactcccaattctgctttctgtctctacggattt
ggctacctgaaggaagtggaacaagacactctgtgtcctcttatgactgt
tttattttacttagggtgtttctaaggcccatctactttgtagcatgtct
gccagtgtttcattctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgt
gtgtg
gaattcaacgaaatccctatctttctcaaatcttaaaaggaaaaaaaaat
catagagagtcattggcaatgtttccttttgtgacagccatatggtgaga
aggaagggacactttccacaggggcaagtgacacgggatcccttttatgc
taaacctggaacagcttgctctcctctccaagtcagtccttccatttcct
gctccctgcttcctctccaagaccctgtctcttcatcacaggctcagtta
aagcctcacattttgatcctctcttttctttcataaggaaagaacacaca
ttctttatacatgtgcctacagaatgtgcctggcctactcatatagggcc
ctggtaaaactgaagttgaaaacaaagcaaaacacattcaatgccatcca
tcattttgctttagttatttcctatgtagctcctcacaattttttaaatt
aatgtattcagtgttatttattgtatggcgagatactcgtgtgttatggc
aggcatgcagaggtcagaggacatcgttgcagagtcagcactcctctcat
gcctttaagtggccttcggggatcaaacccagggcatcagccttgcacgg
tgagagcttcacccactgagccatcttgctggcagtgctctgccccaccc
actaaaccgtcggctggcctttcttttcatacattttaaaatagagtttc
tggagtattgtttaaagaacaagatgtcaggaatcttataaaagagttat
cctggcaaccggagatatggttgtctgtaacaaatgcgcagtgaagggct
atggtgggggctctgaatataataaacagatcccagctggaaaggaccat
gggaaagcaaagacagggagacagggagtttgtttgtttgtttgtttgta
tccataccttagcagcagctggtggaggacaggcagcattggatatcaac
agtgatagctgtggcaagtgaccctcttcttctctggtcctgaagccacc
cgaagagcaaagcttccccaggaagaagacaaaatgagcctctctgagaa
atcggctcttcttggaagcaagaggctatgatgtggggtgcttgatagac
tgatgagtctgtctgtagggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_43866488_43866550
seq2: B6Ng01-282C22.b_193_253 (reverse)

seq1  CACACACACATACACACACACACACAGACAGACATATACACACACACACA  50
      |||||||||||||||||||||||||  ||| ||| | ||||| |   | |
seq2  CACACACACATACACACACACACAC--ACACACACACACACAGAATGAAA  48

seq1  CAGAGACAGACAT  63
      ||  | |||||||
seq2  CACTGGCAGACAT  61

seq1: chr7_140647613_140648730
seq2: B6Ng01-282C22.g_68_1190

seq1  GAATTCAACGAAATCCCTATCTTTCTCAAATCTTAAAAGGAAAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGAAATCCCTATCTTTCTCAAATCTTAAAAGGAAAAAAAAAT  50

seq1  CATAGAGAGTCATTGGCAATGTTTCCTTTTGTGACAGCCATATGGTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAGTCATTGGCAATGTTTCCTTTTGTGACAGCCATATGGTGAGA  100

seq1  AGGAAGGGACACTTTCCACAGGGGCAAGTGACACGGGATCCCTTTTATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGACACTTTCCACAGGGGCAAGTGACACGGGATCCCTTTTATGC  150

seq1  TAAACCTGGAACAGCTTGCTCTCCTCTCCAAGTCAGTCCTTCCATTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGGAACAGCTTGCTCTCCTCTCCAAGTCAGTCCTTCCATTTCCT  200

seq1  GCTCCCTGCTTCCTCTCCAAGACCCTGTCTCTTCATCACAGGCTCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTGCTTCCTCTCCAAGACCCTGTCTCTTCATCACAGGCTCAGTTA  250

seq1  AAGCCTCACATTTTGATCCTCTCTTTTCTTTCATAAGGAAAGAACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCACATTTTGATCCTCTCTTTTCTTTCATAAGGAAAGAACACACA  300

seq1  TTCTTTATACATGTGCCTACAGAATGTGCCTGGCCTACTCATATAGGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATACATGTGCCTACAGAATGTGCCTGGCCTACTCATATAGGGCC  350

seq1  CTGGTAAAACTGAAGTTGAAAACAAAGCAAAACACATTCAATGCCATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAAACTGAAGTTGAAAACAAAGCAAAACACATTCAATGCCATCCA  400

seq1  TCATTTTGCTTTAGTTATTTCCTATGTAGCTCCTCACAATTTTTTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGCTTTAGTTATTTCCTATGTAGCTCCTCACAATTTTTTAAATT  450

seq1  AATGTATTCAGTGTTATTTATTGTATGGCGAGATACTCGTGTGTTATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTCAGTGTTATTTATTGTATGGCGAGATACTCGTGTGTTATGGC  500

seq1  AGGCATGCAGAGGTCAGAGGACATCGTTGCAGAGTCAGCACTCCTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGCAGAGGTCAGAGGACATCGTTGCAGAGTCAGCACTCCTCTCAT  550

seq1  GCCTTTAAGTGGCCTTCGGGGATCAAACCCAGGGCATCAGCCTTGCACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAAGTGGCCTTCGGGGATCAAACCCAGGGCATCAGCCTTGCACGG  600

seq1  TGAGAGCTTCACCCACTGAGCCATCTTGCTGGCAGTGCTCTGCCCCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCTTCACCCACTGAGCCATCTTGCTGGCAGTGCTCTGCCCCACCC  650

seq1  ACTAAACCGTCGGCTGGCCTTTCTTTTCATACATTTTAAAATAGAGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCGTCGGCTGGCCTTTCTTTTCATACATTTTAAAATAGAGTTTC  700

seq1  TGGAGTATTGTTTAAAGAACAAGATGTCAGGAATCTTATAAAAGAGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTATTGTTTAAAGAACAAGATGTCAGGAATCTTATAAAAGAGTTAT  750

seq1  CCTGGCAACCGGAGATATGGTTGTCTGTAACAAATGCGCAGTGAAGGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAACCGGAGATATGGTTGTCTGTAACAAATGCGCAGTGAAGGGCT  800

seq1  ATGGTGGGGGCTCTGAATATAATAAACAGATCCCAGCTGG-AAGGACCAT  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATGGTGGGGGCTCTGAATATAATAAACAGATCCCAGCTGGAAAGGACCAT  850

seq1  GGGAAAGCAAAGACAGGGAGACAGGGAGTTTGTTTGTTTGTTTGTTTGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCAAAGACAGGGAGACAGGGAGTTTGTTTGTTTGTTTGTTTGTA  900

seq1  TCCATACCTTAGCAGCAGCTGGT-GAGGACAGGCAGCATTGGATATCAAC  948
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCATACCTTAGCAGCAGCTGGTGGAGGACAGGCAGCATTGGATATCAAC  950

seq1  AGTGATAGCTGTGGCAAGTGACCCTC-TCCTCTCT-GTCCTGAAG-CACC  995
      |||||||||||||||||||||||||| || ||||| ||||||||| ||||
seq2  AGTGATAGCTGTGGCAAGTGACCCTCTTCTTCTCTGGTCCTGAAGCCACC  1000

seq1  CGAAAGAGGCAAAGCTTCCCCAGGAAGAAGAC-AAATGAGCCTCT-GAAG  1043
      || |||| |||||||||||||||||||||||| ||||||||||||   ||
seq2  CG-AAGA-GCAAAGCTTCCCCAGGAAGAAGACAAAATGAGCCTCTCTGAG  1048

seq1  AAATCGGCTCT--CTGGAAGCAAGGAGGGCTATGATGT-GGGTGC-TGGT  1089
      |||||||||||   ||||||||||   ||||||||||| |||||| || |
seq2  AAATCGGCTCTTCTTGGAAGCAAG--AGGCTATGATGTGGGGTGCTTGAT  1096

seq1  AGACTGGATGATGTCTGTCTTGTGGGTGG  1118
      ||||| ||||| ||||||||   ||||||
seq2  AGACT-GATGA-GTCTGTCTGTAGGGTGG  1123