BAC Information

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BAC

Clone NameB6Ng01-282N24
Chromosome13 (Build37)
Map Location 26,096,832 - 26,097,740
singlet/doubletsinglet
Overlap genenone
Upstream geneMrs2l, LOC675430, Dcdc2a, Nrsn1, Tpi-rs8, LOC214973
Downstream geneLOC666221, LOC100042180, LOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282N24.bB6Ng01-282N24.g
ACCGA081974GA081975
length9161,037
definitionB6Ng01-282N24.b B6Ng01-282N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccttgtctgggtaagactggctattgtctcaagtaaacactctg
cagaccagccctaagctattccggctccctccattctttgtaatgcctga
ttagtttgaccatctctactagaagtaaatttgaatgttactgaataggc
aacattcttacagaattgctatgaaattccaagtttgtctgcttcaagga
ttttctgggacgttgggacactgacagaagccctagctatgtcagaattc
aatctttaaaggcacatataatgaaacagtactgaaagagatcacgtgga
tccatacaccagactaacgtggggatagggtatgagtatacgggttatga
gaatgccatggttccagggggttgagtttccttgaaactctttgcctcgt
gagtgcttccaggcctctaggcctgccaagcaggcttccctggagtgtgc
atagcaatatgcaaagtcaaaaactgtccatgtaaatagcataacatagg
atgctcctctaagtgcttacattgtgtggtatccctgcagcagctggagt
cacatctgtggaaggatgctttgggcactgggtttcacttacttttccta
acgtaagtgagggaatgcaatcaggtaacttgaagtgactgtttctcttt
gaggagggctgatgtttacctctctgtaccccaagcaccatttttctgct
ttccttttctctccaagtaactgaataatgagttggacagcatttgagaa
ggtgagtaaattaaagtaattgctatgcagaagtgagcttttgggatatt
ttgacttagtggttgttttcctgtgggttacaccaatgttaatttccagt
tactcctgtgccaaatttttaacttttctgggtattagacacgttcctaa
aaactagaacagcact
gaattctctgtttggctctttactccatgtttcaattgggttgtttggat
ttttggagattagcttcttgagttctttatttattttggatattagccca
gtatcagatatggggttagtgaagatttttccctaatttgtagattgctg
atttgtcctattgacgacatccttcaccatacaggagctttttagtttta
tgaggttccatttgtcaactgttgatcttagagcctgattcattggagtt
cttttcagaaaatttccctgtgccaatgaattggaggatctttctcactt
ccccttcttttagattcagtgtatctggttttatgtagaggatttataac
aggttcctcccttcaagggccagggatatacaaagaaaagggggaagata
aattgcaataatcagagttgtacatgactacaaggcgatactgtcttcct
gacaaaacataattcacagaggctgtgacagtatggacaagtcattcata
aattttttcaagcctgaaaaaatcccatccaggagaagaagtaggcacaa
agtcccacacctatacaagaagatatttgcaattgatggctgctagtaga
gggaaggtaggttttctccactgtaaatgacaatgggtatatcagccaca
ttctggggccaagaagagaagttggccaacacaaaatcaattctgtttca
tcaagtgcttttgttgttattgctgggcttttttgttttctgtcctttgg
gtttctgttctgtttttcttataggtgtttttcttttattttgttttttc
cttgagagaaaaatagcatgaaagtttgggttggagtacagaggtaaggt
aaattctgggaagaacttggggggaagggccaatatataatcaaaacgta
ttattttaataccttcaatgtataagtatggtataaatttttgacaatgg
gcagtcaatccttgcccactattttgggaagaattcacatggaccctcca
cgatagctggcctcttgtagtatacagataggtacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26096832_26097740
seq2: B6Ng01-282N24.b_47_962

seq1  GAATTCCCTTGTCTGGGTAAGACTGGCTATTGTCTCAAGTAAACACTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGTCTGGGTAAGACTGGCTATTGTCTCAAGTAAACACTCTG  50

seq1  CAGACCAGCCCTAAGCTATTCCGGCTCCCTCCATTCTTTGTAATGCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCAGCCCTAAGCTATTCCGGCTCCCTCCATTCTTTGTAATGCCTGA  100

seq1  TTAGTTTGACCATCTCTACTAGAAGTAAATTTGAATGTTACTGAATAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTGACCATCTCTACTAGAAGTAAATTTGAATGTTACTGAATAGGC  150

seq1  AACATTCTTACAGAATTGCTATGAAATTCCAAGTTTGTCTGCTTCAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTTACAGAATTGCTATGAAATTCCAAGTTTGTCTGCTTCAAGGA  200

seq1  TTTTCTGGGACGTTGGGACACTGACAGAAGCCCTAGCTATGTCAGAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGGACGTTGGGACACTGACAGAAGCCCTAGCTATGTCAGAATTC  250

seq1  AATCTTTAAAGGCACATATAATGAAACAGTACTGAAAGAGATCACGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAAAGGCACATATAATGAAACAGTACTGAAAGAGATCACGTGGA  300

seq1  TCCATACACCAGACTAACGTGGGGATAGGGTATGAGTATACGGGTTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACACCAGACTAACGTGGGGATAGGGTATGAGTATACGGGTTATGA  350

seq1  GAATGCCATGGTTCCAGGGGGTTGAGTTTCCTTGAAACTCTTTGCCTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCATGGTTCCAGGGGGTTGAGTTTCCTTGAAACTCTTTGCCTCGT  400

seq1  GAGTGCTTCCAGGCCTCTAGGCCTGCCAAGCAGGCTTCCCTGGAGTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTTCCAGGCCTCTAGGCCTGCCAAGCAGGCTTCCCTGGAGTGTGC  450

seq1  ATAGCAATATGCAAAGTCAAAAACTGTCCATGTAAATAGCATAACATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATATGCAAAGTCAAAAACTGTCCATGTAAATAGCATAACATAGG  500

seq1  ATGCTCCTCTAAGTGCTTACATTGTGTGGTATCCCTGCAGCAGCTGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCTCTAAGTGCTTACATTGTGTGGTATCCCTGCAGCAGCTGGAGT  550

seq1  CACATCTGTGGAAGGATGCTTTGGGCACTGGGTTTCACTTACTTTTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGTGGAAGGATGCTTTGGGCACTGGGTTTCACTTACTTTTCCTA  600

seq1  ACGTAAGTGAGGGAATGCAATCAGGTAACTTGAAGTGACTGTTTCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAGTGAGGGAATGCAATCAGGTAACTTGAAGTGACTGTTTCTCTTT  650

seq1  GAGGAGGGCTGATG-TTACCTCTCTGTACCCCAAGCACCA-TTTTCTGCT  698
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  GAGGAGGGCTGATGTTTACCTCTCTGTACCCCAAGCACCATTTTTCTGCT  700

seq1  TTCCTTTTCTCTCCAAGTAACTGAATAATGAGTTGGACAGCATTTGAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCTCTCCAAGTAACTGAATAATGAGTTGGACAGCATTTGAGAA  750

seq1  GGTGAG-AAATTAAAGTAATTGCTATGCAGAAGTGAGC-TTTGGGATATT  796
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTGAGTAAATTAAAGTAATTGCTATGCAGAAGTGAGCTTTTGGGATATT  800

seq1  TTGACTTAGTGG-TGTTTTCCTGT-GGTTACACCAATGTCTATTTTCCAG  844
      |||||||||||| ||||||||||| |||||||||||||| || |||||||
seq2  TTGACTTAGTGGTTGTTTTCCTGTGGGTTACACCAATGT-TAATTTCCAG  849

seq1  TTACTCCTGTGCCAAA-TTTTAACTTTTCTGGGCATTAGACACGTT-CTA  892
      |||||||||||||||| |||||||||||||||| |||||||||||| |||
seq2  TTACTCCTGTGCCAAATTTTTAACTTTTCTGGGTATTAGACACGTTCCTA  899

seq1  AAAACAAGAACAGCACT  909
      ||||| |||||||||||
seq2  AAAACTAGAACAGCACT  916