BAC Information

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BAC

Clone NameB6Ng01-284B03
Chromosome13 (Build37)
Map Location 17,159,237 - 17,310,966
singlet/doubletdoublet
Overlap gene5033411D12Rik
Upstream geneLOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284B03.bB6Ng01-284B03.g
ACCGA082865GA082866
length5511,001
definitionB6Ng01-284B03.b B6Ng01-284B03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,159,237 - 17,159,793)(17,309,970 - 17,310,966)
sequence
tctttttgatcatccttgacatacacatgttcctcagagagttcactagt
aaactattgactaaaagtacatgtacacattccttagactgttagctagg
agactattgattaaatacaatatgcacataatgaagagatagaaatttac
aatgatacttgtgaaatggcatagaatttctttccatcaaattataattg
tatgaaagtcaaaatataaggttaagtcagaaatgtgtgttccacttctg
tggttgagaaaagaagccagaagtcccacagatcatctccatacaggatt
cgaaccagcctgctttcctttgtgtttatgatactcttgtttcagatgaa
tcatcttctaccaagaccaccatttaccctgttaattgttctctacttcc
agtcattcttcaccttatttatttcttaactatctatcactcagagtttt
tttctctctctctcttctctatccttctcctccctactctctctccatcc
ctgcttctttccccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
g

gaattctttttgataaattttttatatctgaatttgttataaattaaata
attttagcaagtaaacaaagttacagtcgaatgacattgcacaagagtcc
tcccatggtgctgctagcacagtgcttatggcatgttctttgacggataa
caaaaggctgagaaagtttcaatagtatatgtctgaatgaaatctgaaat
acatttctataaatagaagttgtaatgaaaattgtagttgacaaattcat
aaaggaaaaggtgagcagtttttggattttattagcttataatgccaaat
gataagctatttttttgcttaaaaaatcaataaaatttttctagtagttg
gagaatcctatttagatagaatcaatgtgaaactctgatacagagtaaca
ataattgagaaagataattagataatttagaaagatatacgacgaacttc
aactccataaagaatgacatttcagggacttgtttgttctaaatagtgag
taaacaccagagttaccaatgagcataggcagttacaatttatgatgctt
tggattatagcttattcctagagaagattgagttggagaacttttccaca
tatataatctatatacatatataataaaacaaataatcctcaaaaataga
acaaagaagaaaagaatttagccatttttctatttatgtgaaaatatcct
tgaggctgtatttacttgtcccccttttctttctcagacagtgtcacttt
tgtagtgggttgtcttcaaacccacgatcttctttcatcatgttgagtga
ctgacaaatgcattgacctccagtgctggagtgctggggtttagtgaatt
catacatcacttttagcagcacacatatttccacaatgctcattctgaca
actactgtcttcttaaagtttcccttaagcaaactttatatgcctcagta
caggggaacaccagggccaagaacgtggggagtggggtgggtagaagagt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17159237_17159793
seq2: B6Ng01-284B03.b_45_601

seq1  GAATTCTCTTTTTGATCATCCTTGACATACACATGTTCCTCAGAGAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTTGATCATCCTTGACATACACATGTTCCTCAGAGAGTTC  50

seq1  ACTAGTAAACTATTGACTAAAAGTACATGTACACATTCCTTAGACTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAAACTATTGACTAAAAGTACATGTACACATTCCTTAGACTGTTA  100

seq1  GCTAGGAGACTATTGATTAAATACAATATGCACATAATGAAGAGATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAGACTATTGATTAAATACAATATGCACATAATGAAGAGATAGAA  150

seq1  ATTTACAATGATACTTGTGAAATGGCATAGAATTTCTTTCCATCAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAATGATACTTGTGAAATGGCATAGAATTTCTTTCCATCAAATTA  200

seq1  TAATTGTATGAAAGTCAAAATATAAGGTTAAGTCAGAAATGTGTGTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTATGAAAGTCAAAATATAAGGTTAAGTCAGAAATGTGTGTTCCA  250

seq1  CTTCTGTGGTTGAGAAAAGAAGCCAGAAGTCCCACAGATCATCTCCATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGGTTGAGAAAAGAAGCCAGAAGTCCCACAGATCATCTCCATAC  300

seq1  AGGATTCGAACCAGCCTGCTTTCCTTTGTGTTTATGATACTCTTGTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCGAACCAGCCTGCTTTCCTTTGTGTTTATGATACTCTTGTTTCA  350

seq1  GATGAATCATCTTCTACCAAGACCACCATTTACCCTGTTAATTGTTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATCATCTTCTACCAAGACCACCATTTACCCTGTTAATTGTTCTCT  400

seq1  ACTTCCAGTCATTCTTCACCTTATTTATTTCTTAACTATCTATCACTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGTCATTCTTCACCTTATTTATTTCTTAACTATCTATCACTCAG  450

seq1  AGTTTTTTTCTCTCTCTCTCTTCTCTATCCTTCTCCTCCCTACTCTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTTCTCTCTCTCTCTTCTCTATCCTTCTCCTCCCTACTCTCTCT  500

seq1  CCATCCCTGCTTCTTTCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTGCTTCTTTCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550

seq1  GTGTGTG  557
      |||||||
seq2  GTGTGTG  557


seq1: chr13_17309970_17310966
seq2: B6Ng01-284B03.g_67_1067 (reverse)

seq1  CACTCTTCTACCCA-CCCACT-CCCACG-TCTTGGCCCTGGTGTTCCCCT  47
      |||||||||||||| |||||| |||||| |||||||||||||||||||||
seq2  CACTCTTCTACCCACCCCACTCCCCACGTTCTTGGCCCTGGTGTTCCCCT  50

seq1  GTACTGAGGCATATAAAGTTTGCTTAAGGAAAACTTTAAGAAGACAGTAG  97
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTACTGAGGCATATAAAGTTTGCTTAAGGGAAACTTTAAGAAGACAGTAG  100

seq1  TTGTCAGAATGAGCATTGTGGAAATATGTGTGCTGCTAAAAGTGATGTAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAATGAGCATTGTGGAAATATGTGTGCTGCTAAAAGTGATGTAT  150

seq1  GAATTCACTAAACCCCAGCACTCCAGCACTGGAGGTCAATGCATTTGTCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAACCCCAGCACTCCAGCACTGGAGGTCAATGCATTTGTCA  200

seq1  GTCACTCAACATGATGAAAGAAGATCGTGGGTTTGAAGACAACCCACTAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCAACATGATGAAAGAAGATCGTGGGTTTGAAGACAACCCACTAC  250

seq1  -AAAGTGACACTGTCTGAGAAAGAAAAGGGGGACAAGTAAATACAGCCTC  296
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGACACTGTCTGAGAAAGAAAAGGGGGACAAGTAAATACAGCCTC  300

seq1  AAGGATATTTTCACATAAATAGAAAAATGGCTAAATTCTTTTCTTCTTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATTTTCACATAAATAGAAAAATGGCTAAATTCTTTTCTTCTTTG  350

seq1  TTCTATTTTTGAGGATTATTTGTTTTATTATATATGTATATAGATTATAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTTGAGGATTATTTGTTTTATTATATATGTATATAGATTATAT  400

seq1  ATGTGGAAAAGTTCTCCAACTCAATCTTCTCTAGGAATAAGCTATAATCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAAAGTTCTCCAACTCAATCTTCTCTAGGAATAAGCTATAATCC  450

seq1  AAAGCATCATAAATTGTAACTGCCTATGCTCATTGGTAACTCTGGTGTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCATAAATTGTAACTGCCTATGCTCATTGGTAACTCTGGTGTTT  500

seq1  ACTCACTATTTAGAACAAACAAGTCCCTGAAATGTCATTCTTTATGGAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTATTTAGAACAAACAAGTCCCTGAAATGTCATTCTTTATGGAGT  550

seq1  TGAAGTTCGTCGTATATCTTTCTAAATTATCTAATTATCTTTCTCAATTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCGTCGTATATCTTTCTAAATTATCTAATTATCTTTCTCAATTA  600

seq1  TTGTTACTCTGTATCAGAGTTTCACATTGATTCTATCTAAATAGGATTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACTCTGTATCAGAGTTTCACATTGATTCTATCTAAATAGGATTCT  650

seq1  CCAACTACTAGAAAAATTTTATTGATTTTTTAAGCAAAAAAATAGCTTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTACTAGAAAAATTTTATTGATTTTTTAAGCAAAAAAATAGCTTAT  700

seq1  CATTTGGCATTATAAGCTAATAAAATCCAAAAACTGCTCACCTTTTCCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGCATTATAAGCTAATAAAATCCAAAAACTGCTCACCTTTTCCTT  750

seq1  TATGAATTTGTCAACTACAATTTTCATTACAACTTCTATTTATAGAAATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTTGTCAACTACAATTTTCATTACAACTTCTATTTATAGAAATG  800

seq1  TATTTCAGATTTCATTCAGACATATACTATTGAAACTTTCTCAGCCTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGATTTCATTCAGACATATACTATTGAAACTTTCTCAGCCTTTT  850

seq1  GTTATCCGTCAAAGAACATGCCATAAGCACTGTGCTAGCAGCACCATGGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCGTCAAAGAACATGCCATAAGCACTGTGCTAGCAGCACCATGGG  900

seq1  AGGACTCTTGTGCAATGTCATTCGACTGTAACTTTGTTTACTTGCTAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTTGTGCAATGTCATTCGACTGTAACTTTGTTTACTTGCTAAAA  950

seq1  TTATTTAATTTATAACAAATTCAGATATAAAAAATTTATCAAAAAGAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAATTTATAACAAATTCAGATATAAAAAATTTATCAAAAAGAATT  1000

seq1  C  997
      |
seq2  C  1001


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