BAC Information

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BAC

Clone NameB6Ng01-284G12
Chromosome13 (Build37)10 (Build37)
Map Location 15,309,811 - 15,310,81279,753,637 - 79,753,744
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039916, Hecw1, Mrpl32, Psma2, AW209491, EG665099, LOC670994
Downstream geneEG625121, Gli3, LOC665157, Inhba, LOC625181
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284G12.bB6Ng01-284G12.g
ACCGA083116GA083117
length1,110956
definitionB6Ng01-284G12.b B6Ng01-284G12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,309,811 - 15,310,812)(79,753,637 - 79,753,744)
sequence
gaattctttgtttagctctgtaatccatttttaatggggttatttgaatt
tctggagtccagcttcttgagctctttatatatattggatattagtcccc
taacagatttaggattagtaaaactcctttcctaatctgttggtggcctt
tttgtcttattgacagtgtcttttgccttacagaagctttgcaatttcat
gaggtcccatttgtcaattcttgatcttacagcacacgccattgctgttc
tgtttaggaatttttccccagtgtccatatcttctaggctttccccactt
tctcctctataagtttcagagtctctggttttatgtggagttctttgaaa
cacttagacttgagctttgtacaaagagataagaatggatcaattcgcat
tcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatgc
tattttccactggatggttttagctcccttgtcaaagatcaagtgaccat
acgtgtgtggattcatttctgggtcttcaattatattccattgatctatc
tgtctgtcgctgtaccagtatcatgcagttttttttttttatcacaattg
cattagaagggtttcaataccctcatttcatcatcactttctctctctct
ctctctctctctctctctctctctatatatatatatatatatatatatat
attctactagtctggtcaaaagctagaaacaacactcagtgagagaaaag
gataattgggtgacctggatctctgttgcatctaggaaagctcttagagg
gtgggacttacaagtagagtcaattaaagttgtttgttatttgtgcttca
tagagtctgcctggcccctaactagcaacctcagcattactctatattcc
tgatgagcactcactccaatccctactgcatcctattgtgatcttacaat
tctcaagggtcatctaattaccaaaaacctaatgtagccagcaaaggctg
aactttcaattgttgttgagatgtctagggagatgcatgcgcttccatcc
tttctgagcatcagaggccccctccaatctctgcgtatgggttagttcac
ttcatcatca
gaattctctgtttagctctgctctatactttttaatagggttatttggtt
ctctggagtctaactttttgagttctttgtatatatttgttattagccct
ctattggatgtaggattggtaacgatcttttcccaatctgttggtttttg
ttttgtcctattgacagtgtcctttgtcttacagaaactttgcaatttta
tgaggtccaatttgtcaattcttggtcttagagcataaagcttggtgttc
tattcaggaactttccctctgtgcccatgtgttcaagggtttcccccact
ctctcttctattaggttcactgtatctggttttatgtggaggtccttgat
ccacttggacttgagctttgtgtagagagataagaatgaatcaatatgcc
cggcgtggtggcgtacacctttagtcccagcacttgggaggcagaagcag
gcggatttctgagtttgaggccagcctggtctacaaagtgagttccagga
cagccagggctatacagagaatccctatctcgaaaaccgaaaaagaaaag
aaagaaaaaaaaaaaagaagaagaatggatcaatatgatcttccttctga
acccaacagaggccgctaagggctccagagtgctctccacacctcagaac
ctcgggatcaccttaggatcactggtgagtggaatgctcaacatcagctc
caaagaataccggagggtcttgtgccagcaggaacagggatggaggaact
ctgcctgaccagaggctgggatccattcaggtcggggccagtcctgccat
cttctgagtgaacccagcctagggcatctagggcaccagaggactctcca
tgtcacaggacccctagcacacccaggacctcctgatcacctgagagcac
atgggcgatagaagcaacagagcttcttggtcagggtcccctcagccttc
atcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15309811_15310812
seq2: B6Ng01-284G12.b_151_1156

seq1  AGATTTAGGATTAGTAAAACTCCTTTCCTAATCTGTTGGTGGCCTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGGATTAGTAAAACTCCTTTCCTAATCTGTTGGTGGCCTTTTTG  50

seq1  TCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTCATGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTCATGAGG  100

seq1  TCCCATTTGTCAATTCTTGATCTTACAGCACACGCCATTGCTGTTCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTGTCAATTCTTGATCTTACAGCACACGCCATTGCTGTTCTGTT  150

seq1  TAGGAATTTTTCCCCAGTGTCCATATCTTCTAGGCTTTCCCCACTTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTTTTCCCCAGTGTCCATATCTTCTAGGCTTTCCCCACTTTCTC  200

seq1  CTCTATAAGTTTCAGAGTCTCTGGTTTTATGTGGAGTTCTTTGAAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAGTTTCAGAGTCTCTGGTTTTATGTGGAGTTCTTTGAAACACT  250

seq1  TAGACTTGAGCTTTGTACAAAGAGATAAGAATGGATCAATTCGCATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTGAGCTTTGTACAAAGAGATAAGAATGGATCAATTCGCATTCTT  300

seq1  CTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTATT  350

seq1  TTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATACGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATACGT  400

seq1  GTGTGGATTCATTTCTGGGTCTTCAATTATATTCCATTGATCTATCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATTCATTTCTGGGTCTTCAATTATATTCCATTGATCTATCTGTC  450

seq1  TGTCGCTGTACCAGTATCATGCAGTTTTTTTTTTTTATCACAATTGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCTGTACCAGTATCATGCAGTTTTTTTTTTTTATCACAATTGCATT  500

seq1  AGAAGGGTTTCAATACCCTCATTTCATCATCACTTTCTCTCTCTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGTTTCAATACCCTCATTTCATCATCACTTTCTCTCTCTCTCTCT  550

seq1  CTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATTC  600

seq1  TACTAGTCTGGTCAAAAGCTAGAAACAACACTCAGTGAGAGAAAAGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTCTGGTCAAAAGCTAGAAACAACACTCAGTGAGAGAAAAGGATA  650

seq1  ATTGGGTGACCTGGATCTCTGTTGCATCTAGGAAAGCTCTTAGAGGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTGACCTGGATCTCTGTTGCATCTAGGAAAGCTCTTAGAGGGTGG  700

seq1  GACTTACAAGTAGAGTCAATTAAAGTTGTTTGTTATTTGTGCTTCATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACAAGTAGAGTCAATTAAAGTTGTTTGTTATTTGTGCTTCATAGA  750

seq1  GTCTGCCTGGCCCCTAACTAGCAACCTCAGCATTACTCTATATTCCTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTGGCCCCTAACTAGCAACCTCAGCATTACTCTATATTCCTGAT  800

seq1  GAGCACTCACTCCAAT-CCTACTGCATCCTATTGTGATCTTACAATTCTC  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGCACTCACTCCAATCCCTACTGCATCCTATTGTGATCTTACAATTCTC  850

seq1  AA-GGTCATCTAAATACCAAAAACCTAATGTAGCCAGC-AAGGCTGAACT  897
      || |||||||||| |||||||||||||||||||||||| |||||||||||
seq2  AAGGGTCATCTAATTACCAAAAACCTAATGTAGCCAGCAAAGGCTGAACT  900

seq1  TTC-ATTGTTGTTGAGATGTCTAGGGAGATGCATGCGCTTCCCATCCTTT  946
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCAATTGTTGTTGAGATGTCTAGGGAGATGCATGCGCTT-CCATCCTTT  949

seq1  CTGAGCATCAAGAGG-CCCCTCC-ATCTCCGGCGTAT-GGTTAGGTCACT  993
      ||||||||| ||||| ||||||| |||| | |||||| |||||| |||||
seq2  CTGAGCATC-AGAGGCCCCCTCCAATCT-CTGCGTATGGGTTAGTTCACT  997

seq1  TCATCATCA  1002
      |||||||||
seq2  TCATCATCA  1006

seq1: chr10_79753637_79753744
seq2: B6Ng01-284G12.g_519_642 (reverse)

seq1  ATTC----TCTTTTTTTTTT------------TTTTTGGTTTTTCGAGAC  34
      ||||    ||||||||||||            ||||| | ||||||||| 
seq2  ATTCTTCTTCTTTTTTTTTTTTCTTTCTTTTCTTTTTCGGTTTTCGAGAT  50

seq1  AGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCA  84
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCA  100

seq1  GGCTGGCCTCAAACTCAGAAATCC  108
      ||||||||||||||||||||||||
seq2  GGCTGGCCTCAAACTCAGAAATCC  124