BAC Information

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BAC

Clone NameB6Ng01-287N10
Chromosome13 (Build37)
Map Location 86,795,730 - 86,796,444
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287N10.bB6Ng01-287N10.g
ACCGA085655GA085656
length7161,133
definitionB6Ng01-287N10.b B6Ng01-287N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgactatgggttttagtaacagaggaaataagtctaagaaaca
agactcctgtgatactacatacatatgtgtgacagttacttttctttaaa
taccagttaaattatctagtttgataatttaggtatgagaagtatgaaaa
atgtcaacaaagactctacctagtcctttaactaagagttcattatgata
atgacaatgactgacaaataaaattaatatattttcattgttagttgagg
caaacagatactgaccaaatcacttatataaactaacagatagtcctgat
ctctttatggctgaatttaaaaataaggacaatttaaaactctcatatgc
ttgctctaaatttagctgtcaatatttgatggaatgtagtctcacactga
atactaaataaattgcaggatttattactatttttactgctactataatt
gtcaaaataattgtttttaattaaaaccctgcatgtctttgtgaaaattc
agtttgcttttcttttttattctgtcaaatcactgagcactgtaacagca
tgtgtaagacttaatttaagtgaatttgtaaagagagaagatcttagagg
caggcagatttctgagttcgaggccagcctggtctgcaaagtgagttcca
ggccagccagggttatacagagaaacactgtctcgaaaaaaacaaagaga
ggggggggggggggag

gaattcctgttatttcaaagatgtttatcatgaatggctgttggattttt
tcaaatgccttctcaacatctaatgagatgatcatgttgttttttccttt
aattttgtgtaaattgtggattatgttgatggatttccatatattaaacc
atccctgcatcacctgggatgaagccaacatgattatgatggatgatcat
tttgatgtgttcttggattcagttagagggaattttattgagtatttttt
catcgatattcataaggaaaattggtctgaagttctctttctctgttggg
tatttatgtggtttaggtatcagagtaactgtggctttatagaattaatt
gggtagagtaccttctgtttatattttgtgaaacaatttgaggagaattg
gaattaggtcttctttgaaggtctgatagaactctgctctaaacccatca
ggtcctgagctttttatggttgggagactactaataactgcttctatttc
tttagtggatttgggggttcctgtgctctccagttagtctgactaagtgt
ttatctatcttattgattttcttaaaaaaatttttttttcagccctaagt
ttatttcctgctgtctcttcctcttgggtgaatatgcttcttttgtttta
gcacttttaggtgtgctgtcaagcatcttgtgtatgttctctgtaatttc
tttttgggggccctcagaattatgagttttcctctgctttcattatgccc
ataagtttgggtatgttgtggcttcatttcaattaaactctaaaaagtcc
ttaatttttttttctttatttcttccttgaccaagttatcattgagtaga
atgtttttcagcttccatgtgaatgttggctttctcttatttatgttgtt
attggaagatcagctttagtctgtggtgatctgatagatgcatgggataa
tttcaattatttttgtatctgttgaggctgtttgtgaccaataatatggg
tcaattttgaagaagtaaatgagtgctgaagaaaaaggtacattcctttg
gttaagataaatgtatgtaaatatctatgaatccatgggttcaatacctg
ttagtttccaggtgtctctggttagattactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86795730_86796444
seq2: B6Ng01-287N10.b_47_762 (reverse)

seq1  CT-CCCCCCCCCCCCCTCTCTTTGTTTTTTTCGAGACAGTGTTTCTCTGT  49
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCCCCCTCTCTTTGTTTTTTTCGAGACAGTGTTTCTCTGT  50

seq1  ATAACCCTGGCTGGCCTGGAACTCACTTTGCAGACCAGGCTGGCCTCGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCTGGCTGGCCTGGAACTCACTTTGCAGACCAGGCTGGCCTCGAA  100

seq1  CTCAGAAATCTGCCTGCCTCTAAGATCTTCTCTCTTTACAAATTCACTTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCTGCCTGCCTCTAAGATCTTCTCTCTTTACAAATTCACTTA  150

seq1  AATTAAGTCTTACACATGCTGTTACAGTGCTCAGTGATTTGACAGAATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTCTTACACATGCTGTTACAGTGCTCAGTGATTTGACAGAATAA  200

seq1  AAAAGAAAAGCAAACTGAATTTTCACAAAGACATGCAGGGTTTTAATTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGCAAACTGAATTTTCACAAAGACATGCAGGGTTTTAATTAA  250

seq1  AAACAATTATTTTGACAATTATAGTAGCAGTAAAAATAGTAATAAATCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTATTTTGACAATTATAGTAGCAGTAAAAATAGTAATAAATCCT  300

seq1  GCAATTTATTTAGTATTCAGTGTGAGACTACATTCCATCAAATATTGACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTATTTAGTATTCAGTGTGAGACTACATTCCATCAAATATTGACA  350

seq1  GCTAAATTTAGAGCAAGCATATGAGAGTTTTAAATTGTCCTTATTTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATTTAGAGCAAGCATATGAGAGTTTTAAATTGTCCTTATTTTTAA  400

seq1  ATTCAGCCATAAAGAGATCAGGACTATCTGTTAGTTTATATAAGTGATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCCATAAAGAGATCAGGACTATCTGTTAGTTTATATAAGTGATTT  450

seq1  GGTCAGTATCTGTTTGCCTCAACTAACAATGAAAATATATTAATTTTATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTATCTGTTTGCCTCAACTAACAATGAAAATATATTAATTTTATT  500

seq1  TGTCAGTCATTGTCATTATCATAATGAACTCTTAGTTAAAGGACTAGGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTCATTGTCATTATCATAATGAACTCTTAGTTAAAGGACTAGGTA  550

seq1  GAGTCTTTGTTGACATTTTTCATACTTCTCATACCTAAATTATCAAACTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTGTTGACATTTTTCATACTTCTCATACCTAAATTATCAAACTA  600

seq1  GATAATTTAACTGGTATTTAAAGAAAAGTAACTGTCACACATATGTATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTAACTGGTATTTAAAGAAAAGTAACTGTCACACATATGTATGT  650

seq1  AGTATCACAGGAGTCTTGTTTCTTAGACTTATTTCCTCTGTTACTAAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCACAGGAGTCTTGTTTCTTAGACTTATTTCCTCTGTTACTAAAAC  700

seq1  CCATAGTCGTGAATTC  715
      ||||||||||||||||
seq2  CCATAGTCGTGAATTC  716


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