BAC Information

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BAC

Clone NameB6Ng01-290I22
Chromosome13 (Build37)
Map Location 37,319,738 - 37,320,760
singlet/doubletsinglet
Overlap genenone
Upstream geneFars2, LOC666758, Nrn1, F13a1
Downstream geneLy86, LOC100042794, LOC100042800, LOC100042802, LOC100041624, Rreb1, Ssr1, Cage1, Riok1, Dsp, 6530403A03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290I22.bB6Ng01-290I22.g
ACCGA087672GA087673
length1,2131,026
definitionB6Ng01-290I22.b B6Ng01-290I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgatgaataccaaatggctgagaagcacctgaaaaaaaa
tgttcagcatcctcaatcatcagggaaatgcaaatcaaaacaaccctgag
attccacctcacaccagtcagaatggctaagataaaaaattcaggtgaca
gcagatgctggcaaggatgtgggagaaagaggaacactcctccattgttg
atgggattgcaagcttgtacaaccactctggaaatcagtctggcggttcc
tcagaaaattgaacgtagtactaccagaggatccagcaatacttctcctg
agcatatatccagaagatgttccaaccggtaaaaaggacacattctccac
tatattcatagcattcttatttataatagccagaagctggaaagaaccca
gatgcccctcaacagaggaatggatacagaaaatgtggtattacacaatg
gagtagtgctcagctattaaaaagaatgaattcataaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggttacccaatcacaaa
agaactcacatgatatgtactcactagtaagtggatatccgcccagaaac
ttagaatacccaagatataagatacaagttgcaaaacacatgaaactcaa
gaagaacgaagaccaaagtgtggatactttgccccttcttagaattggga
acaaagcacccatggaaggagttacagagacaaagtttagagctgagacg
aaaagatggaccatctagagactgccatacccagagatccaccccataat
cagcctccaaacgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctgtctcttgtgaggctatgctggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcccagagctccc
aatggaggagctagagaaagtacccaaggagctggggggatctgcaaccc
tataggtggaataacaatatgaactaaccagtaccctccggagcttgtgt
attatgtatcagaagaatagcctagtcggccatcagtggaaagaatggtc
gtgcaaactttattctgcctcagtacagggaatggccaaggcgagagtgg
aatggggttgggttgcgacaactcttctcgagctactcactgacgtcttt
cagatacgtcatc
gaattctttgaaaacatttgaactcttccaagagctgcctgagagaggac
tgccacaatgcttgataaccctccaaagtcgggggtctctggtgagtctt
gaaaaatggagacttttatgaaaactcccaggttaggtatgctctgatct
gcaggagtcgagagttctttggaaaccagggacccatggtagatttgctt
catctaaaggaacaacagttactactgagaaattgctctgaggtaatata
aaggctcaataatagacttcactttcaaaaattaatttcagggaaacttg
acaccaagttctctaaatagaggtcttgaggccaagacacagactgacaa
gaaactgaaaactccaaattaagactggagcatgtcctcaatttgcatga
gcaagtggagataggtgtgttgtcagacttgactcttctccttatgttga
gttatcttgtcaggaaattttctttgggaaaaaaaattattaaaacaaaa
agatcacaccatttaaaagctaaggctgaccacagaaatataaagactgc
atagttttaattatatagagagcactatctttagaaacattatttcatag
atgattaaaactaacagtagtcaactgaagaatatggggagagagatgga
aagagggtagacaatgtgcacagggtaagagaaaaaatgcaatgctccta
tcacaaagaggtaggtacgatcctaaaaattaattacatatttcaaaata
gctagtagagaagatcttgaatgctctccatgtccagaaatgatgtggct
ggctagcaaattagtggtatccataagctcttggttcagttgagagtctc
taccaatgaataaaggtagagagctatcaagaaagacctgaggcctccac
atgcacacacacacacacacacacacacacacacacacacacacacacac
acatgcatactcacccactacagacatgtaaaaatgcatatacatttcca
gcagacactcataccagaaaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37319738_37320760
seq2: B6Ng01-290I22.g_65_1090

seq1  GAATTCTTTGAAAACATTTGAACTCTTCCAAGAGCTGCCTGAGAGAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAAACATTTGAACTCTTCCAAGAGCTGCCTGAGAGAGGAC  50

seq1  TGCCACAATGCTTGATAACCCTCCAAAGTCGGGGGTCTCTGGTGAGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAATGCTTGATAACCCTCCAAAGTCGGGGGTCTCTGGTGAGTCTT  100

seq1  GAAAAATGGAGACTTTTATGAAAACTCCCAGGTTAGGTATGCTCTGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGGAGACTTTTATGAAAACTCCCAGGTTAGGTATGCTCTGATCT  150

seq1  GCAGGAGTCGAGAGTTCTTTGGAAACCAGGGACCCATGGTAGATTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGTCGAGAGTTCTTTGGAAACCAGGGACCCATGGTAGATTTGCTT  200

seq1  CATCTAAAGGAACAACAGTTACTACTGAGAAATTGCTCTGAGGTAATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAAGGAACAACAGTTACTACTGAGAAATTGCTCTGAGGTAATATA  250

seq1  AAGGCTCAATAATAGACTTCACTTTCAAAAATTAATTTCAGGGAAACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCAATAATAGACTTCACTTTCAAAAATTAATTTCAGGGAAACTTG  300

seq1  ACACCAAGTTCTCTAAATAGAGGTCTTGAGGCCAAGACACAGACTGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAGTTCTCTAAATAGAGGTCTTGAGGCCAAGACACAGACTGACAA  350

seq1  GAAACTGAAAACTCCAAATTAAGACTGGAGCATGTCCTCAATTTGCATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAAAACTCCAAATTAAGACTGGAGCATGTCCTCAATTTGCATGA  400

seq1  GCAAGTGGAGATAGGTGTGTTGTCAGACTTGACTCTTCTCCTTATGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGGAGATAGGTGTGTTGTCAGACTTGACTCTTCTCCTTATGTTGA  450

seq1  GTTATCTTGTCAGGAAATTTTCTTTGGGAAAAAAAATTATTAAAACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTTGTCAGGAAATTTTCTTTGGGAAAAAAAATTATTAAAACAAAA  500

seq1  AGATCACACCATTTAAAAGCTAAGGCTGACCACAGAAATATAAAGACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACACCATTTAAAAGCTAAGGCTGACCACAGAAATATAAAGACTGC  550

seq1  ATAGTTTTAATTATATAGAGAGCACTATCTTTAGAAACATTATTTCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTAATTATATAGAGAGCACTATCTTTAGAAACATTATTTCATAG  600

seq1  ATGATTAAAACTAACAGTAGTCAACTGAAGAATATGGGGAGAGAGATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAAACTAACAGTAGTCAACTGAAGAATATGGGGAGAGAGATGGA  650

seq1  AAGAGGGTAGACAATGTGCACAGGGTAAGAGAAAAAATGCAATGCTCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTAGACAATGTGCACAGGGTAAGAGAAAAAATGCAATGCTCCTA  700

seq1  TCACAAAGAGGTAGGTACGATCCTAAAAATTAATTACATATTTCAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGAGGTAGGTACGATCCTAAAAATTAATTACATATTTCAAAATA  750

seq1  GCTAGTAGAGAAGATCTTGAATGCTCTCCATGTCCAGAAATGATGTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTAGAGAAGATCTTGAATGCTCTCCATGTCCAGAAATGATGTGGCT  800

seq1  GGCTAGCAAATTAGTGGTATCCATAAGCTCTTGGTTCAGTTGAGAGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCAAATTAGTGGTATCCATAAGCTCTTGGTTCAGTTGAGAGTCTC  850

seq1  TACCAATGAATAAAGGTAGAGAGCTATCAAGAAAGACCTGAGGCCTCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATGAATAAAGGTAGAGAGCTATCAAGAAAGACCTGAGGCCTCCAC  900

seq1  ATGCACACACACACACACACACACACACACACACACACACACACACACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGCACACACACACACACACACACACACACACACACACACACACACACA-  949

seq1  CACATGCATACTCACCCACTACAGACATGTAAAAATGCATATACA-TTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACATGCATACTCACCCACTACAGACATGTAAAAATGCATATACATTTCC  999

seq1  AGCAGACACACATAC---AAAAAAAAA  1023
      ||||||||| |||||   |||||||||
seq2  AGCAGACACTCATACCAGAAAAAAAAA  1026