BAC Information

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BAC

Clone NameB6Ng01-293G06
Chromosome13 (Build37)
Map Location 33,917,008 - 34,052,109
singlet/doubletdoublet
Overlap geneOTTMUSG00000000720, Serpinb6c, Serpinb6a
Upstream geneSerpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94
Downstream geneNqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666, 1300014I06Rik, D0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293G06.bB6Ng01-293G06.g
ACCGA089784GA089785
length1,171889
definitionB6Ng01-293G06.b B6Ng01-293G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,050,923 - 34,052,109)(33,917,008 - 33,917,636)
sequence
gaattcacctttctcactgttatgatccaatacatgatgagaaaaagcat
aagagattcagggctcaccgtttaatgagggctatgaagtagctagtcca
cattgtgtccacagtcatgaagcagagcgaggacaggagatagggctagg
gtgtgcaccctcaaggccagccccatttcccacttccttcagcaaggtta
cccttcttaaacttcaacaccaaatgttagacatttgagcctatggggaa
actttcacattcaaaccataacagggcttttaagatgttggagttctgtt
agttgggcttctgctgtatgacaggaaaggcggaagtgagtcatagtctt
ctgtagctcttctgagtcctgtggattttgttgaacaaacagaggacaca
gagaaacaaagattagtaaaaaaataatccattgtaattttataactata
aaaatgttaagtctgtactattttggtgactccaatggagaatttttgct
gactactcttttctatacttataacatatcatctgaatacagtaggaatt
aatgtaattgtttttgtgtcattgtgtgcctaaaatttaaactgcctgtg
tgtgtgtgtgtgtgaatttgaatatctgaggatgatttttgaactacatt
aatcataagaattgttacctctgacattttccccctctttctttgaaaaa
aaaacatttagttagaatgcaggaaattaacagttattgttaaattttag
gccaaagaaaaacaggttatttgaggatttcactttatccagaactaagt
aaaatgtcaactaataaaaatgttaattttcagcatttttcctaatacaa
tgatttgtgccacatactattaaatattaatatgtaaagtcacaaatgtc
tggcatattaaagttttaatcttggaaactgagactaaaatgttttataa
gattattgctaattttgaaagtagtattcttttcttcttttgtgtgtgag
tgcaagtgcatgttggtgtgcagtcagaacatcaacatcgagtgcttctc
aatcactccccactgtatttttgaagacaggctttttatgagcaatgact
ggaattcattgcaatgctagctagcttacaacaacctcctagcggtcgtc
cactgtcagttctggagtata
gaattcagcctcaagactccttcctgtctcccattgataggcccctaccc
atgctccaaggacaccacaaagatatagccctgttactgttttaataaag
cttcaggaagtcccatggttgggacttctagtcacaagagaaagtgggga
gggagatgctaaatcttttaaattcaggctccattttagagaacctagcc
taagtttgaactcggcaaactaacagtctggtacctaacattagtttcca
agccccccccccaaaaaaaacccttgaccctaactccagtctctaggcta
atgcccaataagaccagtatctccaggttattcctccaacaaatctgcac
cccaggtaacaagcccactccttgcgaccactaatgcagaggggagcaga
agttaagtttatgatatgactcccagcaccaaacaattacattaaagacc
acaacagcttcccaattagatgatcgttcatgtactccctgtttgctgct
tactataaaatctttcaccaacagacattcagggctccctcaccaccaaa
actgtcctgtgtgatggtggtgcagtggggttggggggcaagccagctca
aatagaataaagaccctgttgtattgcatcagattggctcctgtctgttt
ttgagggtggggatcactcacatttccctggtacaacattccaaagataa
ccaagattgtatctcctccagcagttgtacttttttaatgtgtcactcaa
gtggtactggtttttgaaggtataaaggtgtcatgaagaacagctgaggc
ttggcaccgtgggaggccatggaaggccttttgtgaaagtgcagcctcag
ttgtagctgatagcccaggactgaaggggtcaagcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_34050923_34052109
seq2: B6Ng01-293G06.b_46_1216 (reverse)

seq1  TATACTCCCAGAACTGGAGACAGGTGGGACAGAACAGCTAGGGGGTTTGG  50
      |||||| ||||||||   |||| ||||   |  || |||||| ||||  |
seq2  TATACT-CCAGAACT---GACA-GTGG---ACGACCGCTAGGAGGTT--G  40

seq1  TGGTTAGCTAGCCTAGCAATGGCAATGAATTCCAAGTTCATTGCTCATTA  100
      | || |||||| ||||| || |||||||||||||   |||||||||| ||
seq2  TTGTAAGCTAG-CTAGC-ATTGCAATGAATTCCA--GTCATTGCTCA-TA  85

seq1  AAAAGCCTGTCTCAAAAAATACAGTGGGGAGTGATTGAGGAAGGCACTCG  150
      ||||||||||||  |||||||||||||||||||||||||  | |||||||
seq2  AAAAGCCTGTCTTCAAAAATACAGTGGGGAGTGATTGAG--AAGCACTCG  133

seq1  ATGTTGATG-TCTGACTGCACACCAACATGCACCTGCACTCACACACAAA  199
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  ATGTTGATGTTCTGACTGCACACCAACATGCACTTGCACTCACACACAAA  183

seq1  AGAAGAAAAGAATACTACTTTCAAAAATAGCAATAATCTTATAAAACATT  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAAGAAAAGAATACTACTTTCAAAATTAGCAATAATCTTATAAAACATT  233

seq1  TTAGTCTCAGTTTCCAAGATTAAAACTTTAATATGCCAGACATTTGTGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTCAGTTTCCAAGATTAAAACTTTAATATGCCAGACATTTGTGAC  283

seq1  TTTACATATTAATATTTAATAGTATGTGGCACAAATCATTGTATTAGGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATATTAATATTTAATAGTATGTGGCACAAATCATTGTATTAGGAA  333

seq1  AAATGCTGAAAATTAACATTTTTATTAGTTGACATTTTACTTAGTTCTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGAAAATTAACATTTTTATTAGTTGACATTTTACTTAGTTCTGG  383

seq1  ATAAAGTGAAATCCTCAAATAACCTGTTTTTCTTTGGCCTAAAATTTAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTGAAATCCTCAAATAACCTGTTTTTCTTTGGCCTAAAATTTAAC  433

seq1  AATAACTGTTAATTTCCTGCATTCTAACTAAATGTTTTTTTTTCAAAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTGTTAATTTCCTGCATTCTAACTAAATGTTTTTTTTTCAAAGAA  483

seq1  AGAGGGGGAAAATGTCAGAGGTAACAATTCTTATGATTAATGTAGTTCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGGAAAATGTCAGAGGTAACAATTCTTATGATTAATGTAGTTCAA  533

seq1  AAATCATCCTCAGATATTCAAATTCACACACACACACACACAGGCAGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCCTCAGATATTCAAATTCACACACACACACACACAGGCAGTTT  583

seq1  AAATTTTAGGCACACAATGACACAAAAACAATTACATTAATTCCTACTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAGGCACACAATGACACAAAAACAATTACATTAATTCCTACTGT  633

seq1  ATTCAGATGATATGTTATAAGTATAGAAAAGAGTAGTCAGCAAAAATTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATGATATGTTATAAGTATAGAAAAGAGTAGTCAGCAAAAATTCT  683

seq1  CCATTGGAGTCACCAAAATAGTACAGACTTAACATTTTTATAGTTATAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGAGTCACCAAAATAGTACAGACTTAACATTTTTATAGTTATAAA  733

seq1  ATTACAATGGATTATTTTTTTACTAATCTTTGTTTCTCTGTGTCCTCTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATGGATTATTTTTTTACTAATCTTTGTTTCTCTGTGTCCTCTGT  783

seq1  TTGTTCAACAAAATCCACAGGACTCAGAAGAGCTACAGAAGACTATGACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAACAAAATCCACAGGACTCAGAAGAGCTACAGAAGACTATGACT  833

seq1  CACTTCCGCCTTTCCTGTCATACAGCAGAAGCCCAACTAACAGAACTCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCGCCTTTCCTGTCATACAGCAGAAGCCCAACTAACAGAACTCCA  883

seq1  ACATCTTAAAAGCCCTGTTATGGTTTGAATGTGAAAGTTTCCCCATAGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTAAAAGCCCTGTTATGGTTTGAATGTGAAAGTTTCCCCATAGGC  933

seq1  TCAAATGTCTAACATTTGGTGTTGAAGTTTAAGAAGGGTAACCTTGCTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTCTAACATTTGGTGTTGAAGTTTAAGAAGGGTAACCTTGCTGA  983

seq1  AGGAAGTGGGAAATGGGGCTGGCCTTGAGGGTGCACACCCTAGCCCTATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGGAAATGGGGCTGGCCTTGAGGGTGCACACCCTAGCCCTATC  1033

seq1  TCCTGTCCTCGCTCTGCTTCATGACTGTGGACACAATGTGGACTAGCTAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCTCGCTCTGCTTCATGACTGTGGACACAATGTGGACTAGCTAC  1083

seq1  TTCATAGCCCTCATTAAACGGTGAGCCCTGAATCTCTTATGCTTTTTCTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCCCTCATTAAACGGTGAGCCCTGAATCTCTTATGCTTTTTCTC  1133

seq1  ATCATGTATTGGATCATAACAGTGAGAAAGGTGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTATTGGATCATAACAGTGAGAAAGGTGAATTC  1171

seq1: chr13_33917008_33917636
seq2: B6Ng01-293G06.g_64_692

seq1  GAATTCAGCCTCAAGACTCCTTCCTGTCTCCCATTGATAGGCCCCTACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTCAAGACTCCTTCCTGTCTCCCATTGATAGGCCCCTACCC  50

seq1  ATGCTCCAAGGACACCACAAAGATATAGCCCTGTTACTGTTTTAATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCAAGGACACCACAAAGATATAGCCCTGTTACTGTTTTAATAAAG  100

seq1  CTTCAGGAAGTCCCATGGTTGGGACTTCTAGTCACAAGAGAAAGTGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGAAGTCCCATGGTTGGGACTTCTAGTCACAAGAGAAAGTGGGGA  150

seq1  GGGAGATGCTAAATCTTTTAAATTCAGGCTCCATTTTAGAGAACCTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATGCTAAATCTTTTAAATTCAGGCTCCATTTTAGAGAACCTAGCC  200

seq1  TAAGTTTGAACTCGGCAAACTAACAGTCTGGTACCTAACATTAGTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTGAACTCGGCAAACTAACAGTCTGGTACCTAACATTAGTTTCCA  250

seq1  AGCCCCCCCCCCAAAAAAAACCCTTGACCCTAACTCCAGTCTCTAGGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCCCCCCAAAAAAAACCCTTGACCCTAACTCCAGTCTCTAGGCTA  300

seq1  ATGCCCAATAAGACCAGTATCTCCAGGTTATTCCTCCAACAAATCTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAATAAGACCAGTATCTCCAGGTTATTCCTCCAACAAATCTGCAC  350

seq1  CCCAGGTAACAAGCCCACTCCTTGCGACCACTAATGCAGAGGGGAGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTAACAAGCCCACTCCTTGCGACCACTAATGCAGAGGGGAGCAGA  400

seq1  AGTTAAGTTTATGATATGACTCCCAGCACCAAACAATTACATTAAAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTTTATGATATGACTCCCAGCACCAAACAATTACATTAAAGACC  450

seq1  ACAACAGCTTCCCAATTAGATGATCGTTCATGTACTCCCTGTTTGCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGCTTCCCAATTAGATGATCGTTCATGTACTCCCTGTTTGCTGCT  500

seq1  TACTATAAAATCTTTCACCAACAGACATTCAGGGCTCCCTCACCACCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATAAAATCTTTCACCAACAGACATTCAGGGCTCCCTCACCACCAAA  550

seq1  ACTGTCCTGTGTGATGGTGGTGCAGTGGGGTTGGGGGGCAAGCCAGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTGTGTGATGGTGGTGCAGTGGGGTTGGGGGGCAAGCCAGCTCA  600

seq1  AATAGAATAAAGACCCTGTTGTATTGCAT  629
      |||||||||||||||||||||||||||||
seq2  AATAGAATAAAGACCCTGTTGTATTGCAT  629