BAC Information

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BAC

Clone NameB6Ng01-293L03
Chromosome13 (Build37)
Map Location 79,391,698 - 79,543,284
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC268676, LOC100042683, LOC622365, LOC100043052, EG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293L03.bB6Ng01-293L03.g
ACCGA090012GA090013
length1,14781
definitionB6Ng01-293L03.b B6Ng01-293L03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,391,698 - 79,392,855)(79,543,204 - 79,543,284)
sequence
gaattctgaatcctatttttcgtgtgcatttctgaaagtaactcctgttt
ctatgttcggtcactcagctcagctctgtccctgaaaagaatgaccttgg
gttgaactgtagagagaaagtggaagaaaagtttactgagaaagttgggg
gaggaaatatgagattaatgcctatgtttgtattggacactattccctgt
gctaaatgttcaatgtgatgggatcgtgttatttattgtattttttagat
catttgcaatgttaatttatatgagtttgatatcgcttttgtctttcagt
tgtgtgttattctgagaaatccctggggaagggcaggatttatacgcttt
gtgtacacattctgcagactaagcgctctggcataattatttttggcact
cactaactgattaaaacatctaatttaactcatgatcagtaagattaaac
ctttttaatatacctcaaaagtaaattatcatttactactcaaacattcc
tttttccacgtgccccaataaagctgttcttttttccgttaatgtacctt
ttaacgaggattccctttgatttcttcctctgggcaaaactgccttgtcc
tttatagtgaggtaaaacaaagatgagacagaggctgactggataggaac
atggtttctaatgtcagactaattgcaaacctttctgtttgtgtgatttg
gtgaagaatttgcttctgcagaaaataagtcgctgctttgcgctcatttg
attcatagacaggtttacacagttaagaggatgtgataatttaaagaatt
actttcacaacttaaaaataaccatgctttcttttactcccttttacatt
tctttattaaaatgtgttttgatcttgttatgaaacctggttagtagaac
ttccaatgccttcttcaatattagaaaatttaatgtgataaacaatgttt
caagggatttcaaagaaagcttggtatataccaaattagaataattgcaa
tttgcagtcccttaacctgctgagactctgcagagtccatcaaagtaata
aagagcgagcagatgtaactgaatagcattgtatgctagctgaaacctca
ggtgctgtaaaatgttcacagtataagtacctcaccatgctgtgtga
agtaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gtcttatcagaaaaggaatgggagaaatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79391698_79392855
seq2: B6Ng01-293L03.b_47_1193

seq1  GAATTCTGAATCCTATTTTTCGTGTGCATTTCTGAAAGTAACTCCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATCCTATTTTTCGTGTGCATTTCTGAAAGTAACTCCTGTTT  50

seq1  CTATGTTCGGTCACTCAGCTCAGCTCTGTCCCTGAAAAGAATGACCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCGGTCACTCAGCTCAGCTCTGTCCCTGAAAAGAATGACCTTGG  100

seq1  GTTGAACTGTAGAGAGAAAGTGGAAGAAAAGTTTACTGAGAAAGTTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACTGTAGAGAGAAAGTGGAAGAAAAGTTTACTGAGAAAGTTGGGG  150

seq1  GAGGAAATATGAGATTAATGCCTATGTTTGTATTGGACACTATTCCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAATATGAGATTAATGCCTATGTTTGTATTGGACACTATTCCCTGT  200

seq1  GCTAAATGTTCAATGTGATGGGATCGTGTTATTTATTGTATTTTTTAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATGTTCAATGTGATGGGATCGTGTTATTTATTGTATTTTTTAGAT  250

seq1  CATTTGCAATGTTAATTTATATGAGTTTGATATCGCTTTTGTCTTTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCAATGTTAATTTATATGAGTTTGATATCGCTTTTGTCTTTCAGT  300

seq1  TGTGTGTTATTCTGAGAAATCCCTGGGGAAGGGCAGGATTTATACGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTATTCTGAGAAATCCCTGGGGAAGGGCAGGATTTATACGCTTT  350

seq1  GTGTACACATTCTGCAGACTAAGCGCTCTGGCATAATTATTTTTGGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACACATTCTGCAGACTAAGCGCTCTGGCATAATTATTTTTGGCACT  400

seq1  CACTAACTGATTAAAACATCTAATTTAACTCATGATCAGTAAGATTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACTGATTAAAACATCTAATTTAACTCATGATCAGTAAGATTAAAC  450

seq1  CTTTTTAATATACCTCAAAAGTAAATTATCATTTACTACTCAAACATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATATACCTCAAAAGTAAATTATCATTTACTACTCAAACATTCC  500

seq1  TTTTTCCACGTGCCCCAATAAAGCTGTTCTTTTTTCCGTTAATGTACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCACGTGCCCCAATAAAGCTGTTCTTTTTTCCGTTAATGTACCTT  550

seq1  TTAACGAGGATTCCCTTTGATTTCTTCCTCTGGGCAAAACTGCCTTGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGAGGATTCCCTTTGATTTCTTCCTCTGGGCAAAACTGCCTTGTCC  600

seq1  TTTATAGTGAGGTAAAACAAAGATGAGACAGAGGCTGACTGGATAGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGTGAGGTAAAACAAAGATGAGACAGAGGCTGACTGGATAGGAAC  650

seq1  ATGGTTTCTAATGTCAGACTAATTGCAAACCTTTCTGTTTGTGTGATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTAATGTCAGACTAATTGCAAACCTTTCTGTTTGTGTGATTTG  700

seq1  GTGAAGAATTTGCTTCTGCAGAAAATAAGTCGCTGCTTTGCGCTCATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAATTTGCTTCTGCAGAAAATAAGTCGCTGCTTTGCGCTCATTTG  750

seq1  ATTCATAGACAGGTTTACACAGTTAAGAGGATGTGATAATTTAAAGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGACAGGTTTACACAGTTAAGAGGATGTGATAATTTAAAGAATT  800

seq1  ACTTTCACAACTTAAAAATAACCATGCTTTCTTTTACTCCCTTTTACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACAACTTAAAAATAACCATGCTTTCTTTTACTCCCTTTTACATT  850

seq1  TCTTTATTAAAATGTGTTTTGATCTTGTTATGAAACCTGGTTAGTAGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTAAAATGTGTTTTGATCTTGTTATGAAACCTGGTTAGTAGAAC  900

seq1  TTCCAATGCCTTCTTCAATATTAGAAAATTTAATGTGATAAACAATGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGCCTTCTTCAATATTAGAAAATTTAATGTGATAAACAATGTTT  950

seq1  CAA-GGATTTCAAAGAAAAGCTTGGTATAATACCAAATTAGAATAATTGC  999
      ||| ||||||||||| |||||||||||| |||||||||||||||||||||
seq2  CAAGGGATTTCAAAG-AAAGCTTGGTAT-ATACCAAATTAGAATAATTGC  998

seq1  AATTTGCAAGTCCCTTAACCTGCTGAGGACTCTTGCAGAGGTCCATCAAA  1049
      ||||||| |||||||||||||||||| ||||| |||||| ||||||||||
seq2  AATTTGC-AGTCCCTTAACCTGCTGA-GACTC-TGCAGA-GTCCATCAAA  1044

seq1  GTAATAAAGAGGCGGAAGCAAGATGTAACTG-ATAGCA-TGTATTGCTTA  1097
      |||||||||| |||  ||| ||||||||||| |||||| |||| ||||  
seq2  GTAATAAAGA-GCG--AGC-AGATGTAACTGAATAGCATTGTA-TGCT--  1087

seq1  AGCTGAGACCTCAAGGTGCTGTAAAATGGTCACAGGTATAAGTACCTCA-  1146
      |||||| ||||| ||||||||||||||| ||||| |||||||||||||| 
seq2  AGCTGAAACCTC-AGGTGCTGTAAAATGTTCACA-GTATAAGTACCTCAC  1135

seq1  CATGCTGGGTGA  1158
      ||||||| ||||
seq2  CATGCTGTGTGA  1147

seq1: chr13_79543204_79543284
seq2: B6Ng01-293L03.g_72_152 (reverse)

seq1  TCCATTTCTCCCATTCCTTCTCAGATCACACACACACACACACACACACA  50
      ||||||||||||||||||| || ||| | || ||||||||||||||||||
seq2  TCCATTTCTCCCATTCCTTTTCTGATAAGACGCACACACACACACACACA  50

seq1  CACACACACACACACACACACACACCTTACT  81
      |||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACCTTACT  81