MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-294F18
Chromosome	13 (Build37)
Map Location	86,023,368 - 86,024,529
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373
Downstream gene	LOC675662, Cox7c, LOC100042887, LOC100042893
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042841 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042851 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 1 Protein

name	LOC100042857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042862 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ccnh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66671 MGI:1913921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218397 MGI:97860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435373 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435373
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	LOC675662 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675662
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Cox7c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12867 MGI:103226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	LOC100042893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042851 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264376 GeneID:100042851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 1 Protein product : similar to Smo protein transcript_id : XM_001478930.1

name	LOC100042862 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264378 GeneID:100042862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Unknown (protein for IMAGE:4910858) transcript_id : XM_001478943.1

name	Ccnh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384405 GeneID:66671 MGI:1913921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin H transcript_id : NM_023243.3

name	Rasa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130145 GeneID:218397 MGI:97860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS p21 protein activator 1 transcript_id : NM_145452.2

name	Cox7c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102385 GeneID:12867 MGI:103226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit VIIc transcript_id : NM_007749.3

name	LOC100042887 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264383 GeneID:100042887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : similar to pol protein transcript_id : XM_001478997.1

name	LOC100042851 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264377 GeneID:100042851
definition	codon_start : 1 product : similar to Smo protein protein_id : XP_001478980.1

name	LOC100042862 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264379 GeneID:100042862
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478993.1

name	Ccnh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963599 CCDS:CCDS26666.1 GeneID:66671 MGI:1913921
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004693 - cyclin-dependent protein kinase activity [Evidence ISS]; GO:0016301 - kinase activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : cyclin H protein_id : NP_075732.1

name	Rasa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703900 CCDS:CCDS26667.1 GeneID:218397 MGI:97860
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005099 - Ras GTPase activator activity [Evidence ISS] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007155 - cell adhesion [Evidence ISS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0007162 - negative regulation of cell adhesion [Evidence ISS]; GO:0001953 - negative regulation of cell-matrix adhesion [Evidence ISS]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0045768 - positive regulation of anti-apoptosis [Evidence ISS]; GO:0030833 - regulation of actin filament polymerization [Evidence ISS]; GO:0008360 - regulation of cell shape [Evidence ISS]; GO:0051252 - regulation of RNA metabolism [Evidence ISS]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IMP] codon_start : 1 note : p120-rasGAP; GTPase-activating protein product : RAS p21 protein activator 1 protein_id : NP_663427.1

name	Cox7c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680991 CCDS:CCDS26668.1 GeneID:12867 MGI:103226
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : cytochrome c oxidase, subunit VIIc protein_id : NP_031775.1

name	LOC100042887 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264384 GeneID:100042887
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001479047.1

name	LOC100042841 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042841
definition	number : 1 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 1 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 2 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 3 pseudo : _no_value

name	LOC100042857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042857
definition	number : 4 pseudo : _no_value

name	LOC675662 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675662
definition	number : 1 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 1 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 2 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 3 pseudo : _no_value

name	LOC100042893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042893
definition	number : 4 pseudo : _no_value

name	LOC435373 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264382 GeneID:435373
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to high mobility group protein homolog HMG4 pseudo : _no_value transcript_id : XR_034009.1

clone name	MSMg01-462E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530E16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-174L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144B02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-298H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053N01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-433L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-294F18.b	B6Ng01-294F18.g
ACC	GA090507	GA090508
length	1,134	1,173
definition	B6Ng01-294F18.b	B6Ng01-294F18.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcttctatttcattctgagatttggacctgtttagatagttttcct gctcttgatttaactttggtatgtggcatctgtctagaaaaccatccatt ttatctagattttacagttttgttgaatataggcttttatagtagtttct gatgattttttgaatttcctccatttctgttatgtgtcccttctgatttc tgatcttattaatttgcatactgcctcttggttctttagttggtttggct aggggtttatctatcttgctgattctctcaaataacctgcttttggtttt gctgattcattgtattgttttctttgattctatttggttgatatcagcca tgagtttgactataacctgccttctactccccttgtgtgagtttgcttct ttttgttctagagctctcaggtgtgttgttaatttcttggtgtaagattt ctccaatttctttaccagcacatttaatgctatgaactttcctcttagca ctgctttcattgtgtcccgtaagtttgggtatgatgtgtcaacattttca ttaaatttaaggaaggctttaacttttctttatttcttccctgaacatat tgtcactgagtagagaattgctcagtttccatgagtatgtgggctctctg tagttttttttttttctgttattaaagactaaccttaggttatagtggtc tgataggatgcatggtattatttcaatcttcttgtgttggttgagggttg tttagtgaccaattatatggtcagttttggagaagattccataaagtgct gagaaggtgtatttttttgttttagggtgaaatgttctgtagatttctgt taaatccatttggttcataacctctcttagtttcactctgtctctgttta gtttctgttccaatgacctgttcattggtgagagtattgtgttggaaatc tcctgtggtaattgtaggctggtctcagtcaagctgaagtttgaaccccg ggaaatagtcattattcacctttcatgacatggtaggtgttccctaatgc tcctgggaactctggctctctgccctagtatactgcaccccaccagcctt cccatcaagtagaagcatggctagaagagtcaca	gaattcactactttctaggtcacagcaggcagcattagacatagaatgtg ccaacaggaatatcagggggctcctgttgcaagactgtaatggcttctga caaactttgactagaatggaagaggatacgtaactcttctctcaatgctc acttggaagatttgaagtttgagactattctgctgtagaaaggacctcat gttgtttagctgcccaggttggagggcaagaagtaaatttgactcattct actctattattaaccctgcacagtcttggaaattgtttggatcctaaatc tgaataaatttgctgattttaagtgagagcagaggacaaatattaaacta taattgctaactcattgttaacatatgccaggaagacttaactacacaat tctggctaattgggttcctctgatgcaaaacaaatgccaacactgttatt cacccaagatcatccggaaggttgacatgtacttaaatgtagagacagtt cgttagcattctaagttaaagcatttcattattccccaagttctcttcca ctgtaggtcaaaatatcttatttgagtagatatttatattgaaaaaggag tatagtctggaaaccatgggataaatcccggtttgcactgctgatgattt ggctctagatacacatggtaccctagaaatgctctgaaccttgccaaagc ttctgttatctccttaggagataaagtgattataagtccatgaaaggaca ttgctgctgtgctagatgtttaaaaatctcaagacatcattatgctaaca acaaggaacactgtggccacattatctatcatattttcctatttcttaat tttgtgcttaagccttttcatattttgctaagttttagggacaaaagaaa gttatctctagaaagcttgcacttaagataataataaatattgcattaaa ccaacacattagcataagataaatgtatttcaaatattctatgttatagc atgtagtcaaatagtgtacaaatgaatatactagaaatttcttaacagaa attattctttgttagttaatctatgtatctacacaaggagaagcttaatt tttgagaaggctttatgttgaaattttaagtacgtattcacattggcata aatccaaagtgatcatgtaactg
quality values	Open. Hide. 58 26 22 26 58 58 58 58 47 41 52 54 62 62 27 25 49 62 62 54 62 62 62 38 33 62 62 62 62 47 42 56 56 38 38 56 44 39 27 44 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 59 62 46 62 62 62 62 62 62 59 54 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 45 47 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 54 58 58 58 58 58 58 52 52 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 58 54 52 48 58 45 38 58 54 58 58 49 54 58 54 52 58 58 58 58 58 52 58 54 52 58 54 54 58 58 52 58 38 51 50 58 41 49 39 58 58 58 49 49 58 58 58 58 58 53 51 58 51 50 41 58 58 58 58 54 52 58 58 54 51 58 58 53 53 52 53 58 58 58 52 51 50 54 58 58 36 33 54 51 41 58 46 58 33 25 58 53 42 58 52 52 40 58 58 52 50 40 33 52 58 41 29 39 54 41 58 53 58 58 58 52 58 58 53 54 51 58 33 49 39 50 58 58 58 58 58 58 58 58 58 58 51 54 53 58 32 50 32 39 39 31 58 53 40 39 29 42 50 33 32 50 51 52 41 24 49 37 50 42 37 52 32 49 54 40 39 53 49 49 47 32 45 26 46 37 31 51 39 37 45 46 54 29 34 40 40 39 25 54 54 41 31 54 45 54 41 41 53 42 53 52 39 51 37 39 51 52 32 47 31 51 19 54 30 24 29 44 23 54 37 52 34 45 42 25 33 41 34 33 23 54 33 39 32 39 37 53 34 35 25 31 40 54 54 30 24 31 42 24 53 53 21 20 13 32 32 41 29 32 18 53 9 7 10 42 31 40 31 51 17 44 53 17 53 33 32 29 32 43 53 53 53 51 51 34 40 24 51 51 32 31 7 46 30 16 24 31 51 31 29 42 34 18 34 29 43 35 35 9 16 12 51 32 30 27 43 26 35 31 51 25 29 30 31 28 14 47 16 31 46 9 42 31 31 30 43 31 27 31 31 43 25 33 31 18 25 17 32 48 26 29 30 32 30 31 23 26 12 32 30 30 25 28 28 46 22 34 14 33 48 29 41 22 31 30 46 12 16 21 20 16 25 11 9 28 16 17 11 19 17 13 25 33 15 23 8 22 11 6 32 23 16 17 12 25 8 6 27 22 30 11 11 38 44 16 33 25 9 16 35 20 33 17 32 24 11 36 31 9 30 25 6 8 9 22 22 31 31 38 38 33 22 29 14 31 33 9 5 12 16 31 36 18 10 8 25 8 34 32 25 15 13 25 39 37 25 8 31 29 13 39 18 19 19 22 24 22 10 6 7 19 16 4 5 10 6 34 11 32 11 18 32 32 31 25 6 7 9 7 8 11 26 33 48 7 14 21 17 11 28 21 21 5 6 6 5 5 10 10 20 11 13 28 12 20 27 10 14 8 6 19 27 8 13 12 7 23 7 15 9 29 9 7 30 6 9 6 8 13 8 15 20 6 6 15 28 28 18 5 9 6 6 14 17 7 17 13 9 28 11 3 3 4 6 7 8 6 21 15 22 17 6 4 11 6 11 7 6 6 4 4 12 18 4 3 4 6 4 5 5 6	Open. Hide. 62 47 43 42 62 47 31 47 47 54 62 56 56 46 56 44 44 27 38 45 47 59 62 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 58 58 58 58 58 58 58 44 52 58 58 58 58 58 58 58 58 58 54 58 58 52 58 58 54 49 58 58 58 54 58 49 58 58 58 58 58 58 44 45 58 49 54 58 58 54 54 58 58 58 58 58 58 58 58 58 52 58 58 52 58 54 58 58 58 54 54 58 54 58 58 58 58 58 54 58 58 58 48 58 58 51 51 58 54 58 58 58 58 58 51 58 51 51 58 58 58 51 58 58 51 58 58 54 58 58 47 47 58 54 58 58 58 58 51 58 58 58 45 42 51 58 58 49 53 37 58 54 50 50 58 58 47 51 50 49 58 58 49 51 54 58 58 54 58 49 58 51 52 53 50 53 50 58 54 50 51 47 41 58 58 52 58 58 58 58 44 58 58 40 51 39 39 51 50 54 58 51 58 44 43 58 53 42 53 52 50 51 43 43 39 34 53 58 50 50 52 58 51 58 58 37 58 51 53 50 39 52 52 58 49 50 50 39 28 52 41 40 54 54 54 50 47 54 53 41 33 49 53 45 40 49 33 53 39 53 54 51 42 38 54 49 54 49 52 38 54 54 32 42 51 45 52 54 52 49 54 35 31 36 33 53 45 42 40 42 54 46 40 41 26 31 42 45 47 40 31 38 38 53 42 31 54 41 49 38 28 51 51 24 41 29 37 54 41 37 39 51 31 26 37 40 40 37 53 33 32 34 52 32 45 45 53 52 27 9 31 31 31 29 46 30 47 35 40 53 36 35 53 32 32 31 34 32 23 25 18 53 32 52 19 32 52 51 51 38 32 45 31 31 16 42 31 36 18 26 36 35 31 29 31 29 30 43 31 31 17 31 30 20 21 42 31 25 28 16 38 29 30 26 29 31 38 21 34 42 31 33 26 38 23 41 42 31 32 46 25 29 30 31 32 29 42 38 46 46 37 46 37 31 31 31 46 31 40 31 24 30 33 31 47 47 29 39 20 31 35 25 21 21 41 29 44 31 21 48 47 30 25 21 32 36 31 48 48 24 31 31 33 25 26 21 20 48 46 32 36 22 46 31 25 9 11 36 38 31 26 36 44 25 25 38 31 31 31 27 24 31 25 26 26 35 47 21 21 37 34 33 38 21 12 29 27 33 12 21 17 25 16 10 7 8 12 30 8 5 43 31 28 10 6 8 14 32 17 21 29 11 43 21 17 29 11 22 19 13 32 32 20 19 10 14 37 13 6 11 11 13 17 10 17 43 30 21 34 16 11 14 48 32 32 22 48 25 21 19 22 8 9 10 19 4 14 9 9 12 16 22 26 19 16 14 14 3 6 14 24 8 21 19 18 27 20 9 6 9 9 18 17 9 34 18 6 16 16 9 18 17 21 17 27 17 19 16 9 34 18 15 38 18 7 5 8 27 7 9 6 10 9 31 11 10 5 3 2 8 5 5 7 7 22 7 6 21 11 7 8 17 15 6 7 21 4 2 5 6 14 17 21 14 6 18 8 11 4 11 12 4 10 8 10 6 4 11 6 7 13 25 9 18 29 17 15 10 7 8 6 6 9 5 2 3 27 10 5 4 10 7 7 3 3 4 7 15 10 14 13 10 8 6 2 3 2 1 2 3 5 3 2 1 3 3 2 4 5 5 22 14 7 22 9 4 5 6 6 9 9 13 6 2 4 6 7 8 7 5 1 2 5 3 3 5 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_86023368_86024529
seq2: B6Ng01-294F18.g_68_1240

seq1  GAATTCACTACTTTCTAGGTCACAGCAGGCAGCATTAGACATAGAATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACTTTCTAGGTCACAGCAGGCAGCATTAGACATAGAATGTG  50

seq1  CCAACAGGAATATCAGGGGGCTCCTGTTGCAAGACTGTAATGGCTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGGAATATCAGGGGGCTCCTGTTGCAAGACTGTAATGGCTTCTGA  100

seq1  CAAACTTTGACTAGAATGGAAGAGGATACGTAACTCTTCTCTCAATGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTGACTAGAATGGAAGAGGATACGTAACTCTTCTCTCAATGCTC  150

seq1  ACTTGGAAGATTTGAAGTTTGAGACTATTCTGCTGTAGAAAGGACCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAAGATTTGAAGTTTGAGACTATTCTGCTGTAGAAAGGACCTCAT  200

seq1  GTTGTTTAGCTGCCCAGGTTGGAGGGCAAGAAGTAAATTTGACTCATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTAGCTGCCCAGGTTGGAGGGCAAGAAGTAAATTTGACTCATTCT  250

seq1  ACTCTATTATTAACCCTGCACAGTCTTGGAAATTGTTTGGATCCTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATTATTAACCCTGCACAGTCTTGGAAATTGTTTGGATCCTAAATC  300

seq1  TGAATAAATTTGCTGATTTTAAGTGAGAGCAGAGGACAAATATTAAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAATTTGCTGATTTTAAGTGAGAGCAGAGGACAAATATTAAACTA  350

seq1  TAATTGCTAACTCATTGTTAACATATGCCAGGAAGACTTAACTACACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCTAACTCATTGTTAACATATGCCAGGAAGACTTAACTACACAAT  400

seq1  TCTGGCTAATTGGGTTCCTCTGATGCAAAACAAATGCCAACACTGTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTAATTGGGTTCCTCTGATGCAAAACAAATGCCAACACTGTTATT  450

seq1  CACCCAAGATCATCCGGAAGGTTGACATGTACTTAAATGTAGAGACAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAGATCATCCGGAAGGTTGACATGTACTTAAATGTAGAGACAGTT  500

seq1  CGTTAGCATTCTAAGTTAAAGCATTTCATTATTCCCCAAGTTCTCTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGCATTCTAAGTTAAAGCATTTCATTATTCCCCAAGTTCTCTTCCA  550

seq1  CTGTAGGTCAAAATATCTTATTTGAGTAGATATTTATATTGAAAAAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGTCAAAATATCTTATTTGAGTAGATATTTATATTGAAAAAGGAG  600

seq1  TATAGTCTGGAAACCATGGGATAAATCCCGGTTTGCACTGCTGATGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTGGAAACCATGGGATAAATCCCGGTTTGCACTGCTGATGATTT  650

seq1  GGCTCTAGATACACATGGTACCCTAGAAATGCTCTGAACCTTGCCAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAGATACACATGGTACCCTAGAAATGCTCTGAACCTTGCCAAAGC  700

seq1  TTCTGTTATCTCCTTAGGAGATAAAGTGATTATAAGTCCATGAAAGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTATCTCCTTAGGAGATAAAGTGATTATAAGTCCATGAAAGGACA  750

seq1  TTGCTGCTGTGCTAGATGTTTAAAAATCTCAAGACATCATTATGCTAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTGTGCTAGATGTTTAAAAATCTCAAGACATCATTATGCTAACA  800

seq1  ACAAGGAACACTGTGGCCACATTATCTATCATATTTTCCTATTTCTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAACACTGTGGCCACATTATCTATCATATTTTCCTATTTCTTAAT  850

seq1  TTTGTGCTTAAGCCTTTTCATATTTTGCTAAGTTTTAGGGACAAAAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTAAGCCTTTTCATATTTTGCTAAGTTTTAGGGACAAAAGAAA  900

seq1  GTTATCTCTAGAAAGCTTGCACTTAAGAT-ATAATAAATA-TGCATTAAA  948
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  GTTATCTCTAGAAAGCTTGCACTTAAGATAATAATAAATATTGCATTAAA  950

seq1  CCAACACATTAGCATAAGATAAATGTATTTCAAATA-TCTAATGTATAGC  997
      |||||||||||||||||||||||||||||||||||| ||||   ||||||
seq2  CCAACACATTAGCATAAGATAAATGTATTTCAAATATTCTATGTTATAGC  1000

seq1  ATGGTAGTCAAAATAGTGTACAAATG-ATATACTAGAAATTTC-TAACAG  1045
      || |||||| |||||||||||||||| |||||||||||||||| ||||||
seq2  AT-GTAGTC-AAATAGTGTACAAATGAATATACTAGAAATTTCTTAACAG  1048

seq1  AA--TATTC--TGTAAG-TAATCTTATTGTATCTACACAAGGAG-AGCT-  1088
      ||  |||||  ||| || ||||||   ||||||||||||||||| |||| 
seq2  AAATTATTCTTTGTTAGTTAATCT--ATGTATCTACACAAGGAGAAGCTT  1096

seq1  -AATTTTGAGAGGGGTTTATG-TGAAATTAT-AGTACTTATTTCACATT-  1134
       | |||||||| || |||||| ||||||| | ||||| || |||||||| 
seq2  AATTTTTGAGAAGGCTTTATGTTGAAATTTTAAGTACGTA-TTCACATTG  1145

seq1  GCATAAATACAAAGT-ATCATTTTAACTG  1162
      |||||||| |||||| |||| | ||||||
seq2  GCATAAATCCAAAGTGATCA-TGTAACTG  1173

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information