BAC Information

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BAC

Clone NameB6Ng01-295O10
Chromosome13 (Build37)
Map Location 66,670,949 - 66,671,474
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
Downstream geneMzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295O10.bB6Ng01-295O10.g
ACCGA091652GA091653
length1,001869
definitionB6Ng01-295O10.b B6Ng01-295O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgatgaacattaagattatatttttgggtaaacatttgtcac
attcactacagccagcccaggctaatatacccagccaaactctcaattac
catagatggagaaaccaaagtattccacgacaaaaccaaattcatacaat
atatttccacgaatccagcccttcaaaggaaaagaagcaatacaaggaca
gaaatcacgccctagaacaaacaagaaagtaattcctcaacaaaccaaaa
agaagacagccacaagaacagaatgccaactctaacaacaaaaataatag
gaagcaacaatttcttttccttattatctcttaatatcaatggactcaat
tccccaataaaaagacatagactaacagactggctacacaaacaggaccc
aacattctgctgcttacaggaaacccatctcagagaaaaagacagacact
acctcagagtgaaaggctggaaaacaattttccaagcaaatggtctgaag
aaacaggctggagtagccattctaatatcagataaaatcgacttccaacc
caaagttatcaaaaaagacaaagagggacacttcatactcatcaaaggta
aaatcctccaagaggaactctcaattctgaatatatatgctccaaatgca
agggcagccacattcattaaagacactttagtaaagctcaaagcacacat
tgcacctcatacaataatagtgggagacttcaacacaccactttcatcaa
tggacagatcatggaaacagaaactaaacagggacacagtgaaactaaca
gaagttatgaaacaaatggacctgacagatatctacagaacattttatcc
taaaacaaaaggatataccttcttctcagcacctcacgggaccttctcca
aaattgaccatataattggtcacaaaacaggcctcaacagatacaaaaac
attgaaattgtcccatgtatcctatcaaaccaccatgggcctaagactga
t
gaattctgcagcttgagggggatgggtatggaagggtggggaatctttag
gttgtgccagagaccaggaatgagaggtcaccaaggataatatgggggtg
atcttagttgagatgcatggcagagagttatggaagctcaagaggcccta
tcttgctaccaggaaggacctctagtggagaattaagcacagtaaatgaa
ccaaatacatttgctccgaaaactggtcctgtctacaagaaatgcaggca
caaagatggagcagagactgagggaatgaacaaatgatacactgacctac
ttgagacccatccctagggcaagcaccaatcctgacattagtgaagatcc
tttgttatacttgcagacagtagcttagcataactgtcctctgagagtct
ccatccagcacctgtctaaaagatgcagagacccacagcctatcattgga
gggctcagggagtcttttggaagagttgggggaaaggattgagtgcctgt
gaaggaacaggaagtctattagaagatccagcgagtcaactaacctgtac
actaggagattctcagagagtgactcaccaaccaaagagcaaacacaggg
tgggccaaggccccaccatatatgtagtaaatgtactttagtcttcacat
gggtcctggaacaaatagagtggggggatgtccctttaaggtgttgtctg
tctgtccaactttgtttcccttaacttggctgcctgttctgaccttcagt
agcagagacctgactttgtcatgtgtggggggatactcaggtggtcccca
ctctccattggtgtagatgaaaaggagttaaggatgagggactgtttaat
gtggaaaggggagggggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66670949_66671474
seq2: B6Ng01-295O10.g_387_938 (reverse)

seq1  ACCCCCTCCCCTTTCTACATTACACAGTCCCTCATCCTTAACTCCTTTTC  50
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  ACCCCCTCCCCTTTCCACATTAAACAGTCCCTCATCCTTAACTCCTTTTC  50

seq1  ATCTAC-CCA---GGGAGTGGGGACCACTTGAGTAT-CCCCCAAACAAGA  95
      |||||| |||   | ||||||||||||| ||||||| |||||| ||| ||
seq2  ATCTACACCAATGGAGAGTGGGGACCACCTGAGTATCCCCCCACACATGA  100

seq1  C-AAGTCA--------------AAGGTCAGACAAGGCAACCAAGTTAGGG  130
      | ||||||              |||||||||  ||||| |||||||| ||
seq2  CAAAGTCAGGTCTCTGCTACTGAAGGTCAGAACAGGCAGCCAAGTTAAGG  150

seq1  GAA--CAGGTTGGACAGACAGACAACACCTT-AAGGGACATCCCCCCACT  177
      |||   | ||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAACAAAGTTGGACAGACAGACAACACCTTAAAGGGACATCCCCCCACT  200

seq1  CTATTTGTTTCAGCAACCATGTGAAGACTGAAGCACATTTACTACATATG  227
      ||||||||| ||| | ||||||||||||| ||| ||||||||||||||| 
seq2  CTATTTGTTCCAGGACCCATGTGAAGACTAAAGTACATTTACTACATATA  250

seq1  TGGTGGGGCCTTGGCCCACCCTGTGTTTGCTCTTTGGCTGGTGGGTCACT  277
      ||||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  TGGTGGGGCCTTGGCCCACCCTGTGTTTGCTCTTTGGTTGGTGAGTCACT  300

seq1  CTCTGAGAATCTCCTAGTGTACCTGATAGTTGACTCGCTGGATCTTCTAA  327
      ||||||||||||||||||||||  | ||||||||||||||||||||||||
seq2  CTCTGAGAATCTCCTAGTGTACAGGTTAGTTGACTCGCTGGATCTTCTAA  350

seq1  TAGACTTCCTGTTCCTTTGCAGGCCCTCAATCCTTTCCCCCAACACTTCC  377
      |||||||||||||||||  ||||| ||||||||||||||||||| |||||
seq2  TAGACTTCCTGTTCCTTCACAGGCACTCAATCCTTTCCCCCAACTCTTCC  400

seq1  AAAAGACTCCATGAGCCCTGTCCAATGATAGGCTGTGAGTCTCTGCATCT  427
      |||||||||| |||||||  ||||||||||||||||| ||||||||||||
seq2  AAAAGACTCCCTGAGCCC--TCCAATGATAGGCTGTGGGTCTCTGCATCT  448

seq1  TTCAGTCAGGTGCTGGATGGAGATTCTCAG-----AGTTATGCTAAGCTA  472
      || || ||||||||||||||||| ||||||     |||||||||||||||
seq2  TTTAGACAGGTGCTGGATGGAGACTCTCAGAGGACAGTTATGCTAAGCTA  498

seq1  CTGTCTGCAAGTATAACAAAGGACCATCACTAATGTCAGGATACGTGCTT  522
      ||||||||||||||||||||||| | ||||||||||||||||  ||||||
seq2  CTGTCTGCAAGTATAACAAAGGATCTTCACTAATGTCAGGATTGGTGCTT  548

seq1  GCCC  526
      ||||
seq2  GCCC  552