BAC Information

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BAC

Clone NameB6Ng01-298G12
Chromosome13 (Build37)
Map Location 33,339,485 - 33,340,470
singlet/doubletsinglet
Overlap genenone
Upstream geneGmds, Wrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d
Downstream geneSerpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298G12.bB6Ng01-298G12.g
ACCGA093520GA093521
length1,178988
definitionB6Ng01-298G12.b B6Ng01-298G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gtttctggggattttattgagcatttttgcatcagtatttataagggaaa
ttggtctgaagttctctttctttgttggatctttgtgtggtttagttatc
agagtaattgtggctccatagaatgaattcggtagagtaccttctgtttc
cattttgaggaatagtttgaggagagtttgaattaggtcttatttgaagg
tctgatagaaatctacactaaaaccatctggtcctgggctttttctggtt
gggagattgttaatgactgcttctatttctttcggggaaatgggactgtt
aagattgttaatctgatcctgatttagctctggtacctggtatctgtcta
ggaaattgtccatttcatccaggttttctcgttttgttgagtatagcctt
ttgtagtaggatctgatgatattttgggtttcatcaggttctgttgttat
gtcttctttttcatttctgattttgttaattaggataatatccctgtgcc
ctctagttaatttggctatgggtttatctatcttgttgattttctcaaag
aagcagttcctggataggttgattctttgaatagttctttttgtttccac
ttcattaatttcagccctaagtgtgattatttcctgctgtctactcttga
gtgaatttgcttcctttcattctaaagcttctaagagtgctgtcagactg
caagtgtaagctctttctactttctttttggaagcattcagggctatgag
ttttcctcttaggactgctttcattgtgtcacataagtttgggtatgttg
tggcttcattttcattaaactctaaaaagtctttaatttctctctttatt
ccttccttgaccaagttatccttgagtagagtgttgttcagtttccacgt
gaatgttggcttttctattatttatgctgttattgaagatcagctttagt
ccatgtgatctgataggatatatgggatatttcaatatttttgtatcttc
aagcccgtttgtgaccattatatggtcattttgagagtaccatgaggctg
agagagtatatccttttgtttagataatgttcgttagatttctggttaat
catgttcataacttcgttaattcatggtcctgattaggtcctgtttccag
aatctgttcccattggtgagaaaggttg
gaattcttttcatggcaaaattagcaattgttaattaacaagacttaaat
tctctgagaattaaatccactaaaggtggcactggatagcatgaatgtgg
cccatgcccatgtctctgacatcatgaaacagtaagcatgagccttggaa
acatattagtaacagaacaccaaatatatgataatgtattccattcaagc
attgctcatgacttggaaaaacaaagagaaaatgaatccatggttgacag
gcaaagggggtggatgtacatgatggataatgataatgggcagcaaacat
acacatcaagagtttcatattcctttgaaagtacagtcaaagccagggaa
tttattctctgaagaaaaattggtatgttgagaacaagctttactgatat
aaacgtgcatctatcctgggacagagttcctaagctatcaccagcatgga
gaagtggatagaaagacccaaggtctaacactcctgatcagtgccgcaga
tcctctgggtccctttgtgtgtggacaggtctctgggtgcatatgggcaa
ggagttggcgagagacagacacccaacacgtgagattgtgtagaatctga
atgtaatgtcaaattgagcatcaaactttttatacagaaaaaaataggga
agttaggtgacacatgggcaaggtacaaatgaagttaccggatgtttaat
gactcttacacaaaactgaggactgtaaacacaaagacaggcaggaactg
ggcaataaaacaactgagacgacgtcagcctatctaaggtcagctatagt
cttagaagtcaggtgtgaggtctttacacacctagggctagggctttcac
acccaagtcatgttctaattagggagttccgttctagctaaccatctcat
gtataatgcaatactctaaaactacagcccgatctactttcctaaaccat
tgtaaattcctgtatatggcagcaacttggcttttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33339485_33340470
seq2: B6Ng01-298G12.g_66_1052

seq1  GAATTCTTTTCATGGCAAAATTAGCAATTGTTAATTAACAAGACTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCATGGCAAAATTAGCAATTGTTAATTAACAAGACTTAAAT  50

seq1  TCTCTGAGAATTAAATCCACTAAAGGTGGCACTGGATAGCATGAATGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGAATTAAATCCACTAAAGGTGGCACTGGATAGCATGAATGTGG  100

seq1  CCCATGCCCATGTCTCTGACATCATGAAACAGTAAGCATGAGCCTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCCCATGTCTCTGACATCATGAAACAGTAAGCATGAGCCTTGGAA  150

seq1  ACATATTAGTAACAGAACACCAAATATATGATAATGTATTCCATTCAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAGTAACAGAACACCAAATATATGATAATGTATTCCATTCAAGC  200

seq1  ATTGCTCATGACTTGGAAAAACAAAGAGAAAATGAATCCATGGTTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCATGACTTGGAAAAACAAAGAGAAAATGAATCCATGGTTGACAG  250

seq1  GCAAAGGGGGTGGATGTACATGATGGATAATGATAATGGGCAGCAAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGGGTGGATGTACATGATGGATAATGATAATGGGCAGCAAACAT  300

seq1  ACACATCAAGAGTTTCATATTCCTTTGAAAGTACAGTCAAAGCCAGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCAAGAGTTTCATATTCCTTTGAAAGTACAGTCAAAGCCAGGGAA  350

seq1  TTTATTCTCTGAAGAAAAATTGGTATGTTGAGAACAAGCTTTACTGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTCTGAAGAAAAATTGGTATGTTGAGAACAAGCTTTACTGATAT  400

seq1  AAACGTGCATCTATCCTGGGACAGAGTTCCTAAGCTATCACCAGCATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGCATCTATCCTGGGACAGAGTTCCTAAGCTATCACCAGCATGGA  450

seq1  GAAGTGGATAGAAAGACCCAAGGTCTAACACTCCTGATCAGTGCCGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATAGAAAGACCCAAGGTCTAACACTCCTGATCAGTGCCGCAGA  500

seq1  TCCTCTGGGTCCCTTTGTGTGTGGACAGGTCTCTGGGTGCATATGGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGGGTCCCTTTGTGTGTGGACAGGTCTCTGGGTGCATATGGGCAA  550

seq1  GGAGTTGGCGAGAGACAGACACCCAACACGTGAGATTGTGTAGAATCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGGCGAGAGACAGACACCCAACACGTGAGATTGTGTAGAATCTGA  600

seq1  ATGTAATGTCAAATTGAGCATCAAACTTTTTATACAGAAAAAAATAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATGTCAAATTGAGCATCAAACTTTTTATACAGAAAAAAATAGGGA  650

seq1  AGTTAGGTGACACATGGGCAAGGTACAAATGAAGTTACCGGATGTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGTGACACATGGGCAAGGTACAAATGAAGTTACCGGATGTTTAAT  700

seq1  GACTCTTACACAAAACTGAGGACTGTAAACACAAAGACAGGCAGGAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTACACAAAACTGAGGACTGTAAACACAAAGACAGGCAGGAACTG  750

seq1  GGCAATAAAACAACTGAGACGACGTCAGCCTATCTAAGGTCAGCTATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAAAACAACTGAGACGACGTCAGCCTATCTAAGGTCAGCTATAGT  800

seq1  CTTAGAAGTCAGGTGTGAGGTCTTTACACACCTAGGGCTAGGGCTTTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAGTCAGGTGTGAGGTCTTTACACACCTAGGGCTAGGGCTTTCAC  850

seq1  ACCCAAGTCATGTTCTAATTAGGGAGTTCCGTTCTAGCTAACCATCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGTCATGTTCTAATTAGGGAGTTCCGTTCTAGCTAACCATCTCAT  900

seq1  GTATAATGCAATACTCTAAAACTACAGCCCGATCTAC-TTCCTAAACCAT  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTATAATGCAATACTCTAAAACTACAGCCCGATCTACTTTCCTAAACCAT  950

seq1  TGTAAATTCCTGTATATGGCAGCAACTTGGCTTTTAT  986
      |||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTCCTGTATATGGCAGCAACTTGGCTTTTAT  987