BAC Information

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BAC

Clone NameB6Ng01-302G21
Chromosome13 (Build37)
Map Location 89,444,194 - 89,445,326
singlet/doubletsinglet
Overlap geneEdil3
Upstream geneLOC667230, EG435375
Downstream geneHapln1, EG667266, Vcan, LOC100042940, Xrcc4, Tmem167, LOC100043170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302G21.bB6Ng01-302G21.g
ACCGA096479GA096480
length1,0031,113
definitionB6Ng01-302G21.b B6Ng01-302G21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccggatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atgtatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggaatctatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcatagggctccc
aatggaggagctagagaaagtagcccaaggagctaagggatctgcaaccc
tat

gaattctttgtattctatctatgctctctaaaagtaaagactggtggtat
aaactagacaactacttataacagatcaaaaatttaattttcttcttagt
agttagactttttgaacttctttgattaaaaatgaaccaacaacattatt
gaaaataaaaacaaataaataaaaaagaatagattaagagtgctaacaaa
ccactatcatagacacatagactgtatacaaaatctatgagatgatattt
tattgaagtgagcataatattgtgtttcaatttaacttttaaataaattt
acagaaaaaaatacgacacagaagaataaagacacacttgtcctgctttg
ttgttaattattttgtcacccaaacccagaacttttctttttcagtattt
gatatactatcctcacttgggtccttcagcttgttgaacttttagagttc
tgtgggctgtatcttgggttttcagcactttttttttttttttttggctg
accatgtgttttgtcttgctaacagatgtttccatgagattttttaaaaa
tgcatatgaaaaaccctagcagtcttaacaaagaaacatggttatgaata
aacataataaatatttgatttttacaaacattaatgtattaatttccaaa
tcctcaaatgtccagaaaatttattttttattttatatatttttgtaatt
gtttcttttattgaaaatacttttttcttttgtttaattaatattttatt
tgtttacatcccaaattttgctcccctcctggtccccccaactgagctct
tacacccatacccctccccttaacttctgacagtgggggggacacttttt
tcatataagataatctgatcaggatttcccctcccccaaatatgcttgtc
cacacctctccacctactcaatccatatcttcttctcttttattaggaaa
aagaagaaacaaacatttatattttttacttctcatcattcatgtaatca
taacatgccatattgcagatgcagcatcttcctctcatttgcttatgcat
attagacacatacatggccaatatggacaatattcttagagagacttact
catatctggccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_89444194_89445326
seq2: B6Ng01-302G21.g_66_1178

seq1  GAATTCTTTGTATTCTATCTATGCTCTCTAAAAGTAAAGACTGGTGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATTCTATCTATGCTCTCTAAAAGTAAAGACTGGTGGTAT  50

seq1  AAACTAGACAACTACTTATAACAGATCAAAAATTTAATTTTCTTCTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGACAACTACTTATAACAGATCAAAAATTTAATTTTCTTCTTAGT  100

seq1  AGTTAGACTTTTTGAACTTCTTTGATTAAAAATGAACCAACAACATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACTTTTTGAACTTCTTTGATTAAAAATGAACCAACAACATTATT  150

seq1  GAAAATAAAAACAAATAAATAAAAAAGAATAGATTAAGAGTGCTAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAAACAAATAAATAAAAAAGAATAGATTAAGAGTGCTAACAAA  200

seq1  CCACTATCATAGACACATAGACTGTATACAAAATCTATGAGATGATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCATAGACACATAGACTGTATACAAAATCTATGAGATGATATTT  250

seq1  TATTGAAGTGAGCATAATATTGTGTTTCAATTTAACTTTTAAATAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGTGAGCATAATATTGTGTTTCAATTTAACTTTTAAATAAATTT  300

seq1  ACAGAAAAAAATACGACACAGAAGAATAAAGACACACTTGTCCTGCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAAAATACGACACAGAAGAATAAAGACACACTTGTCCTGCTTTG  350

seq1  TTGTTAATTATTTTGTCACCCAAACCCAGAACTTTTCTTTTTCAGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATTATTTTGTCACCCAAACCCAGAACTTTTCTTTTTCAGTATTT  400

seq1  GATATACTATCCTCACTTGGGTCCTTCAGCTTGTTGAACTTTTAGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTATCCTCACTTGGGTCCTTCAGCTTGTTGAACTTTTAGAGTTC  450

seq1  TGTGGGCTGTATCTTGGGTTTTCAGCACTTTTTTTTTTTTTTTTTGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTGTATCTTGGGTTTTCAGCACTTTTTTTTTTTTTTTTTGGCTG  500

seq1  ACCATGTGTTTTGTCTTGCTAACAGATGTTTCCATGAGATTTTTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGTTTTGTCTTGCTAACAGATGTTTCCATGAGATTTTTTAAAAA  550

seq1  TGCATATGAAAAACCCTAGCAGTCTTAACAAAGAAACATGGTTATGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGAAAAACCCTAGCAGTCTTAACAAAGAAACATGGTTATGAATA  600

seq1  AACATAATAAATATTTGATTTTTACAAACATTAATGTATTAATTTCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATAAATATTTGATTTTTACAAACATTAATGTATTAATTTCCAAA  650

seq1  TCCTCAAATGTCCAGAAAATTTATTTTTTATTTTATATATTTTTGTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATGTCCAGAAAATTTATTTTTTATTTTATATATTTTTGTAATT  700

seq1  GTTTCTTTTATTGAAAATACTTTTTTCTTTTGTTTAATTAATATTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTATTGAAAATACTTTTTTCTTTTGTTTAATTAATATTTTATT  750

seq1  TGTTTACATCCCAAATTTTGCTCCCCTCCTGGTCCCCCCAACTGAGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATCCCAAATTTTGCTCCCCTCCTGGTCCCCCCAACTGAGCTCT  800

seq1  TACACCCATACCCCTCCCCTTAACTTCTGACAGT-GGGGGGACACTTTTT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACACCCATACCCCTCCCCTTAACTTCTGACAGTGGGGGGGACACTTTTT  850

seq1  TCATATAAGATAATCTGATCAGGATTTCCCCT-CCCCAAATATGCTTGTC  898
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCATATAAGATAATCTGATCAGGATTTCCCCTCCCCCAAATATGCTTGTC  900

seq1  CACACCTCTCCACCTACTCAAATCCATATCTTCTTTCTCTTTTTATTTAG  948
      ||||||||||||||||||| ||||||||||||| |||||||||   ||||
seq2  CACACCTCTCCACCTACTC-AATCCATATCTTC-TTCTCTTTT--ATTAG  946

seq1  GAAAAAGAGAAAAACAAAACATTTATA-TTTTTACTTCCTCATCATTCAT  997
      |||||||| | |||| ||||||||||| ||||||||| ||||||||||| 
seq2  GAAAAAGA-AGAAAC-AAACATTTATATTTTTTACTT-CTCATCATTCA-  992

seq1  TGTAAATCAATAAACATGCCCATATTGCAGATGGCAAGCATCTT-CTCTC  1046
      ||| |||||   |||||| ||||||||||||||   |||||||| |||||
seq2  TGT-AATCA--TAACATG-CCATATTGCAGATG--CAGCATCTTCCTCTC  1036

seq1  ATTTTGCTTATGCAATATTAGACACATTACATGGCAAAATAATGACAATA  1096
      | ||||||||||| |||||||||||| ||||||||  ||||  |||||||
seq2  A-TTTGCTTATGC-ATATTAGACACA-TACATGGC-CAATATGGACAATA  1082

seq1  TTCCTTAAGAGAAGATATTACTCATTATTCTGGCCAG  1133
      ||| |  |||||     ||||||||   |||||||||
seq2  TTCTTAGAGAGA----CTTACTCAT--ATCTGGCCAG  1113


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