BAC Information

Click to search

BAC

Clone NameB6Ng01-303F06
Chromosome13 (Build37)
Map Location 66,009,578 - 66,009,778
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794
Downstream geneEG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303F06.bB6Ng01-303F06.g
ACCGA097155GA097156
length9871,173
definitionB6Ng01-303F06.b B6Ng01-303F06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgaattctcagtttgcccttttcagtaaaggatttgtca
cattcagtgcatttgtaaggtttctctcctgtatgaattctctgatgaat
cctcagactgcctttgaaagtaaagcatttgtcacattcagtgcatttgt
aaggtttctctcctgtatgaattctctgatgaattctcaaacagccattt
tcagtaaaggatttgtcacattcactacatttgtagggtttctctcctgt
atgaattctctgatgaatcctcagactgcctttgaaagtaaagcatttgt
cacattcagtgcatttgtaaggtttctctcctgtatgaattctctgatga
atcctcaaactgaattttttagtaaagcatttgtcacattcactgcattt
gtaaggtttctctcctgtatgaattctctgatgaattctcagatggccat
tttcagtaaaggatttgtcacattgactacatttgtaaggtttctcacct
gtatgatttctctgatgaattctcagatggccattttcagtaaaggattt
gtcacattgactacatttgtaaggtttctctcctgtatgaattctctgat
gaatattaagatgggatttttgggtaaagcatttgtcacattcactgcat
ttgtaaggtttatctcctgtatgaatcctctgatgaattctcagattgcc
tttttcagtaaagcatttctcacatacaatgcatttgtaaggtttctctc
ctgtatgaattctctgatgaatattaagatgagatttttgggtaaagcat
ttgtcacattcactacatttgtaaggtttctctcctgtatgaattctctg
atgaatattaagatgaaatttgtgggtaaagcatttgtcacattcactgc
atttataaattttctcttctgcatgaattccctgatggatactaagatgg
atctgatgggtaaagcatttgtcacttttactacttc
gaattcatacaggagagaaaccttacaaatgtagtgaatgcgacaaatgc
tttactgacaaattcactatgagaaagcatcagagaattcatacaggaga
gaaaccttacaaatgtaatgaatgtgacaaatgctttactgacaaaggca
gtctgagagttcatcagagaattcatacaggagagaaaccttacaaatgc
agtgagtgtgacaaatgttttacccaaccatcccatcttagtattcatcg
tagaattcattcaggagagaaaccttgcaaatgtagtgaatgcgacaaat
gctttactgacaaattcactctgagaaagcatcagagaattcatacagga
gagaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaatt
cactatgagaaagcatcagagaattcatacaggagagaaaccttacaaat
gtaatgaatgtgacaaatgctttactgacaaaggcagtctgagagttcat
cagagaattcatacaggagagaaaccttacaaatgcagtgagtgtgacaa
atgttttaccgaaccatcccatcttagtattcatcgtagaattcattcag
gagagaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaa
ggcagtctgagagttcatcagagaattcatacaggagagaaaccgtacca
atgcagtgagtgtgacaaatgctttactgacaaaagcagtcttagagttc
atcatagaattcatgcaggagagaaaccttacaaatgtagtgaatgcgac
aaatgctttactgacaaaggctatctgagagttcatcatagaattcatgc
aggagagaaatcttacaaatgtagtgaatgtgacaaatgctttactcaca
aaggctctctgagagttcatcatagaatttcatgcaggagagaaaccttt
acaaatgtagtgaatgtgacaaatgttttactgagaaaaaacagtctgag
aaggcatcagagaattccatacaaggagagaaaccttattaaatgcagtt
gaaatgtgacaaatgcttaaccgaaaatcacattcttaagtatcatcaga
agaatcattacagggaagaaccgtacaattgcatgaaatgtgacaatgct
tacccaacacaaatggccaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66009578_66009778
seq2: B6Ng01-303F06.b_91_207 (reverse)

seq1  CAGGAGAGAAACCTTATGAATGTAATTGATATGAGAAAACATTTACATAT  50
      ||||||||||||||||  |||| | |  || ||| |||   |||||    
seq2  CAGGAGAGAAACCTTACAAATGCACTGAATGTGACAAATGCTTTAC----  46

seq1  CACAGTCATTTCCAAGTACATAAATGAGCACATAGT-TGAGAGAAGCCCT  99
              |||| |||           ||    ||| ||||         
seq2  --------TTTCAAAG-----------GC----AGTCTGAG---------  64

seq1  GTGATCGTAATAAAAGTGTTAAAGCCTTTGCGTGTCACTGTACTCTCCAA  149
        |||  | || | ||                                 |
seq2  --GAT--TCATCAGAG---------------------------------A  77

seq1  ATACTTAAAGGAACACACGTTTTAGAGAAACCTTACAAATGCAATGAATG  199
      || | || |||            |||||||||||||||||||| ||||||
seq2  ATTCATACAGG------------AGAGAAACCTTACAAATGCACTGAATG  115

seq1  TG  201
      ||
seq2  TG  117