BAC Information

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BAC

Clone NameB6Ng01-304G14
Chromosome13 (Build37)
Map Location 86,755,614 - 86,756,656
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304G14.bB6Ng01-304G14.g
ACCGA097975GA097976
length1,1891,093
definitionB6Ng01-304G14.b B6Ng01-304G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtacctcatattttaatagtgttatttgatt
ttctagagtacagtttcttgagttctgtgtatatattggatattagtttg
ctatcgaatttgggattggtaaatatcctttcgaagtctgttggtggcct
ttttgtcttattgacagtgtcatttgccttatagaagctttgcaatttta
tgaggtcccatttgctgattcttgatcttacagcaccacccattgttctt
ttcaggaattttcccctgcacccatatcttcgaggcttttccccactttc
tcctctgtaagttttattttctctggttttatgtggagttccttgatcca
cttagacttgtgctttgtacaagtaattaagaacagatcaattcacattc
ttctacatggaaactaccagttgagccagcaccatttgttgaaaatcccg
tcttttccccactggatgacttaaattcctttgtcaaacatcaagtgacc
ctaaaaacatgggtatgggggttcattttggggtcttcaattctaatcca
ttaatcttcctgtgtgccgctgtaccagtaccatgcagtttttaatcaca
attgctctgtagtacagcttgaagtcaagcatggtgattccaccagaggt
tcttttattttagagatagtttttggtatcctaggtattttgttgttcca
gatgaatttacaaatttccctttctaacttggtgaagatcttatcataca
gatatttcacttcattagttagagtcacaccaaggtattttatataattt
gtgactgttgtaaagggtgttgtttccctgatttctttctcagcctattt
atcctttgtgcagagaaaggccactaatttgtttgaggcaattttatatc
cagctacttcaccgaagctgtttatcaggttaggagttctctgggtggaa
tttttagggtcacttatatatactatcatatcatctgcaaatactgaata
tttttgaatttcctcctttccaaatgtatccattggatctcgttgtgtct
atgcctctggattggacttcatgtctatatgatatgtagggagaaaggtg
ggcagctgttctaggtcctggattagtggatgcttccagcttcctttcca
gtatagattatgtgtttgaaactacctgtgggatttgac

gaattctagttaggttctactagtaattttcagattgaaaaaatgactca
ctgtatggcccagtataactttgtacttgaagtaatccttataccttaac
tatctgtgtaataggtgtggtggtttaagatttcatgattcaggatatta
atagtgcttacttaatttttttcatatatgtctactaagaattactatat
gtcatttaaaatgcatatgatattctgaaatacatatacatatatatata
tatatgtatatatgcattattttctttcaccatcttttaggaatatacat
gtagcataattaaggcagtagtaaatttcctatgtcattgtttttatttt
tcatgatctttatactttgcttatgtttgtatatcagaatacttttgcta
gtagcataaaattgatttttatattttacacataaatgattaaatgtggc
tatataaatttaacaacatgttagatatgtaagattatcattgtatattt
atttgtgtaaatttttactatgaatatattaacacatttatttctcctat
agcaatagttcatttattcaattataacttatgagaaattttagtattgc
agggtatttgatcatactgtcatccatgagattgtattattttctgagaa
aactgtttctagttgtgttatagctcagaccttagcatcatccttaaatt
actctagctaaaatacagacatactattagtatatacctttaattcaaaa
caatgaatgtaatgttagattgtagaagaaagcacccatgcttgaaagtg
atgtctaattgactgagaggtaaagtaacaaaccagagaaatatttgaca
aatagaggaagcccacctctcacaagaagtggggggaaagggaagctata
taagagagcagtacagagagaaaagtgaaagggaggaggtacttattacc
aggacagtgtaacaaacacatgtgtagagaaagaaaaaagcagtacatag
atgaaaggcagaacaaagtccaagaaaaataaggagctagaagaactcaa
aaccttattgcaagagttatttgaagccagccagatccaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86755614_86756656
seq2: B6Ng01-304G14.g_110_1160 (reverse)

seq1  GAATTGG-TCTGCTTGGCCTCAAACTAACTCTTGCAATA--GGTTTGAG-  46
      ||||||| ||||  |||| ||||| ||||||||||||||  | |||||| 
seq2  GAATTGGATCTGGCTGGCTTCAAA-TAACTCTTGCAATAAGGTTTTGAGT  49

seq1  TCTTCTAGCTCCTTATTTT--CTGG--CTTGTTCTGCC-TTCATCTATGT  91
      |||||||||||||||||||   |||   |||||||||| |||||||||||
seq2  TCTTCTAGCTCCTTATTTTTCTTGGACTTTGTTCTGCCTTTCATCTATGT  99

seq1  CTTGC-TTTTTCTTTCTCTACAACCTGTGTTTG-TACACTTGTCCTGGTA  139
        ||| ||||||||||||||| || |||||||| ||||| ||||||||||
seq2  ACTGCTTTTTTCTTTCTCTAC-ACATGTGTTTGTTACAC-TGTCCTGGTA  147

seq1  AT-AGTACCTCCTCCCTTTCACTTTTCTCTCTGTACTGCTCTCTTATATA  188
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTACCTCCTCCCTTTCACTTTTCTCTCTGTACTGCTCTCTTATATA  197

seq1  GCTTCCCTTTCCCCCCACTTCTTGTGAGAGGTGGGCTTCCTCTATTTTGT  238
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCTTCCCTTTCCCCCCACTTCTTGTGAGAGGTGGGCTTCCTCTA-TTTGT  246

seq1  CAAATATTTCTCTGGTTTGTTACTTTACCTCTCAGTCAATTAGACATCAC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTCTCTGGTTTGTTACTTTACCTCTCAGTCAATTAGACATCAC  296

seq1  TTTCAAGCATGGGTGCTTTCTTCTACAATCTAACATTACATTCATTGTTT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGCATGGGTGCTTTCTTCTACAATCTAACATTACATTCATTGTTT  346

seq1  TGAATTAAAGGTATATACTAATAGTATGTCTGTATTTTAGCTAGAGTAAT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAAAGGTATATACTAATAGTATGTCTGTATTTTAGCTAGAGTAAT  396

seq1  TTAAGGATGATGCTAAGGTCTGAGCTATAACACAACTAGAAACAGTTTTC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGATGATGCTAAGGTCTGAGCTATAACACAACTAGAAACAGTTTTC  446

seq1  TCAGAAAATAATACAATCTCATGGATGACAGTATGATCAAATACCCTGCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAATAATACAATCTCATGGATGACAGTATGATCAAATACCCTGCA  496

seq1  ATACTAAAATTTCTCATAAGTTATAATTGAATAAATGAACTATTGCTATA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAATTTCTCATAAGTTATAATTGAATAAATGAACTATTGCTATA  546

seq1  GGAGAAATAAATGTGTTAATATATTCATAGTAAAAATTTACACAAATAAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAATAAATGTGTTAATATATTCATAGTAAAAATTTACACAAATAAA  596

seq1  TATACAATGATAATCTTACATATCTAACATGTTGTTAAATTTATATAGCC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATGATAATCTTACATATCTAACATGTTGTTAAATTTATATAGCC  646

seq1  ACATTTAATCATTTATGTGTAAAATATAAAAATCAATTTTATGCTACTAG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAATCATTTATGTGTAAAATATAAAAATCAATTTTATGCTACTAG  696

seq1  CAAAAGTATTCTAATATACAAACATAAGCAAAGTATAAAGATCATGAAAA  738
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTATTCTGATATACAAACATAAGCAAAGTATAAAGATCATGAAAA  746

seq1  ATAAAAACAATGACATAGGAAATTTACTACTGCCTTAATTATGCTACATG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACAATGACATAGGAAATTTACTACTGCCTTAATTATGCTACATG  796

seq1  TATATTCCTAAAAGATGGTGAAAGAAAATAATGCATATATACATATATAT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCTAAAAGATGGTGAAAGAAAATAATGCATATATACATATATAT  846

seq1  ATATATATGTATATGTATTTCAGAATATCATATGCATTTTAAATGACATA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTATATGTATTTCAGAATATCATATGCATTTTAAATGACATA  896

seq1  TAGTAATTCTTAGTAGACATATATGAAAAAAATTAAGTAAGCACTATTAA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTCTTAGTAGACATATATGAAAAAAATTAAGTAAGCACTATTAA  946

seq1  TATCCTGAATCATGAAATCTTAAACCACCACACCTATTACACAGATAGTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGAATCATGAAATCTTAAACCACCACACCTATTACACAGATAGTT  996

seq1  AAGGTATAAGGATTACTTCAAGTACAAAGTTATACTGGGCCATACAGTGA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATAAGGATTACTTCAAGTACAAAGTTATACTGGGCCATACAGTGA  1046

seq1  GTCAT  1043
      |||||
seq2  GTCAT  1051


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