BAC Information

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BAC

Clone NameB6Ng01-304L16
Chromosome13 (Build37)
Map Location 93,573,701 - 93,574,860
singlet/doubletsinglet
Overlap genenone
Upstream geneRasgrf2, Msh3, Dhfr, 6430502M16Rik, 4930405M20Rik, Zfyve16, LOC100039070, Spz1, Serinc5, Ppia-ps13_1124.1, Thbs4
Downstream geneEG624619, EG218444, Papd4, LOC100039163, Homer1, Jmy, EG619883, Bhmt, Bhmt2, Dmgdh, Arsb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304L16.bB6Ng01-304L16.g
ACCGA098210GA098211
length1,1701,179
definitionB6Ng01-304L16.b B6Ng01-304L16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaagatctctctctctctgtctctctgtctctctctctctc
tctctctctctccatccctccctccctccttcttcctctccccctctctc
aaatcagaaacttctttttaactaatgtgcacaatgaaattaatctcaaa
aaaccgtaatgttcaagtgaagcaatgaagtctgtttgcacttcacatac
cccaggatccagcagagaaatcgtctcccatcagatagatcagaagaaca
tggctagctcctcccacttctctgttgatatgaagctaacccattttaat
agttaatactgtagttagaaacagaaaagtgaagaattgcagaattaatg
attcatctgtggaaccaggaagtcagatggtgatgtcagatggtgacgtc
agccccatgcccatgacctgaggagaacttaggaagagagctggtagaat
accaacaacaagggcccactggcttctggttccccttccttcccaggcat
tttgcttagaaatccagagtaacattgatactcaagcattgctgtggctg
gtgacttttcctgcagaggaggacagaggaactctgttggcttcttgcag
gcctaccaattcacctgcaactgctcctctttgtcactgggtcacacaaa
cagctaagtacagagttgaatgactgggtccaatcaaacttttattggga
ttcatgtaattttcacatgtcagaaatattactcttccaccaaccattta
aagctacaaaacccattcttgccttcctggccctagaaagagaggtgatg
actatatttggcctatgggccacattaaatcctctttaattaaacaacaa
aaagagaagccatttcctctctttccgacctctattttcccgtcttattt
cctccccatgctctcactataccttactgaccagaacattttctctcaag
ccctcacgtctatgttttatggcactataacctcccaggagaataaaact
catttcaccagagatccaccttgaattacctcagagaacacgagtgggct
tgcggagagccttctggctgacagtctgtttcttcttcccttctggaatg
ggaatccacctcctctaccagagaccttatcgcagaacttccactttttc
tcattgggtgtagaaaaggc
gaattcacttactttcttgcgcgcaccggactcgaccagcaagaacgacg
ctgcaacaggatccttctgcacacgtttattgggagagcttgattgcaga
ggcgaaaagactttttgcccagagctggtgctgcttttataggcctagga
gaggcatgtctcataccctgattggttatgcactaagcctcatttgcatg
ttcctcatctgattggctactctctctcagtacctcactgagcctcatta
tcatacctcatttgcatgtctcacatctgattggttatactctcagtacc
ttacagaacctcattatcatgcctgggccaggcagtgtttttgcaaaaaa
ctttactgcatatgtacacattggttgtttgtccaatcttatgcatggtg
gccagcagtagtcagtgccactcagcaacggcacatgtggcttcccacat
ctccccctgtttgttttaataaaatgaggctggactaggcctgtgcaatt
atgcccatccgccgtggctcctgttttaggtcgttcctctaatgtcacag
ccttacccgtcatagggtaaccctatcgccaccgggccccatgtcttagg
ttggactatgcacgaggaaagttgcccgtctctggataccgcagtgctgt
gtgacaataactgctaaatgacctagggcgaactctgcaaaagaggccag
ccaaaaattgaattagtggggaaatcatgatcactctatcgcttgtaatg
aggaaacctcagtgatgtgcaagggctgatcaatgatcattgagtctctc
tcatctcagtgccgtggagtgcaagagcagagaactcagatgccaactaa
ttcttgagcatggataaccaaatttcagggaggagccgtttttcaatagc
taaaagtgccttgagttataatcaccttgtcacgttttgttgggttctga
atttgcataccaaccagagcatgaacgccagtcacagcatatgggcagca
ccaaacaaaatcacttcccacccattcctttaaagtaagaaaaggcagag
taatctagagtaagtcttccgaggttcactggtccaccttctgttccaat
agttcagatcttgcattctgcagtcgtctgcaaccttcagctctggcaca
gatctcttttcgaggataattttggattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_93573701_93574860
seq2: B6Ng01-304L16.b_49_1218 (reverse)

seq1  GCCTTTTCTAC-CACAAAGAGAAAAAGTGGAGTTCCTGCGTTTATGTTCT  49
      ||||||||||| | ||| |||||||||||||  | |||||  || | |||
seq2  GCCTTTTCTACACCCAATGAGAAAAAGTGGAAGTTCTGCG-ATAAGGTCT  49

seq1  CTGTTAGAGGAGGTGGATTCC--ATCAGGAAGGGAAGA--GAACAGACTG  95
      ||| |||||||||||||||||   ||  ||||||||||   |||||||||
seq2  CTGGTAGAGGAGGTGGATTCCCATTCCAGAAGGGAAGAAGAAACAGACTG  99

seq1  TCAGCCAG-AGGCTCTCCGCA--GCCACT-GTGTTCTCTG-GGTAATTCC  140
      |||||||| ||||||||||||   ||||| |||||||||| |||||||| 
seq2  TCAGCCAGAAGGCTCTCCGCAAGCCCACTCGTGTTCTCTGAGGTAATTCA  149

seq1  AGGTGGATCTCTGGTG-AATGGTTTTTATTCTCCTGGGAGGTTTATAGTG  189
      |||||||||||||||| ||||  |||||||||||||||||| ||||||||
seq2  AGGTGGATCTCTGGTGAAATGAGTTTTATTCTCCTGGGAGG-TTATAGTG  198

seq1  CCATAAAACATAGACGTGA-GGCTTGAGAGAAAATGTTCTGGTCAGTAAG  238
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCATAAAACATAGACGTGAGGGCTTGAGAGAAAATGTTCTGGTCAGTAAG  248

seq1  GTATAGTGAGAGCATGGGGAGGAAATAAGACGGGAAAATAGAGGTCGGAA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGAGAGCATGGGGAGGAAATAAGACGGGAAAATAGAGGTCGGAA  298

seq1  AGAGAGGAAATGGCTTCTCTTTTTGTTGTTTAATTAAAGAGGATTTAATG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAATGGCTTCTCTTTTTGTTGTTTAATTAAAGAGGATTTAATG  348

seq1  TGGCCCATAGGCCAAATATAGTCATCACCTCTCTTTCTAGGGCCAGGAAG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCATAGGCCAAATATAGTCATCACCTCTCTTTCTAGGGCCAGGAAG  398

seq1  GCAAGAATGGGTTTTGTAGCTTTAAATGGTTGGTGGAAGAGTAATATTTC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATGGGTTTTGTAGCTTTAAATGGTTGGTGGAAGAGTAATATTTC  448

seq1  TGACATGTGAAAATTACATGAATCCCAATAAAAGTTTGATTGGACCCAGT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTGAAAATTACATGAATCCCAATAAAAGTTTGATTGGACCCAGT  498

seq1  CATTCAACTCTGTACTTAGCTGTTTGTGTGACCCAGTGACAAAGAGGAGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACTCTGTACTTAGCTGTTTGTGTGACCCAGTGACAAAGAGGAGC  548

seq1  AGTTGCAGGTGAATTGGTAGGCCTGCAAGAAGCCAACAGAGTTCCTCTGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAGGTGAATTGGTAGGCCTGCAAGAAGCCAACAGAGTTCCTCTGT  598

seq1  CCTCCTCTGCAGGAAAAGTCACCAGCCACAGCAATGCTTGAGTATCAATG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTGCAGGAAAAGTCACCAGCCACAGCAATGCTTGAGTATCAATG  648

seq1  TTACTCTGGATTTCTAAGCAAAATGCCTGGGAAGGAAGGGGAACCAGAAG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGGATTTCTAAGCAAAATGCCTGGGAAGGAAGGGGAACCAGAAG  698

seq1  CCAGTGGGCCCTTGTTGTTGGTATTCTACCAGCTCTCTTCCTAAGTTCTC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGCCCTTGTTGTTGGTATTCTACCAGCTCTCTTCCTAAGTTCTC  748

seq1  CTCAGGTCATGGGCATGGGGCTGACGTCACCATCTGACATCACCATCTGA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCATGGGCATGGGGCTGACGTCACCATCTGACATCACCATCTGA  798

seq1  CTTCCTGGTTCCACAGATGAATCATTAATTCTGCAATTCTTCACTTTTCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGTTCCACAGATGAATCATTAATTCTGCAATTCTTCACTTTTCT  848

seq1  GTTTCTAACTACAGTATTAACTATTAAAATGGGTTAGCTTCATATCAACA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAACTACAGTATTAACTATTAAAATGGGTTAGCTTCATATCAACA  898

seq1  GAGAAGTGGGAGGAGCTAGCCATGTTCTTCTGATCTATCTGATGGGAGAC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGGGAGGAGCTAGCCATGTTCTTCTGATCTATCTGATGGGAGAC  948

seq1  GATTTCTCTGCTGGATCCTGGGGTATGTGAAGTGCAAACAGACTTCATTG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCTGCTGGATCCTGGGGTATGTGAAGTGCAAACAGACTTCATTG  998

seq1  CTTCACTTGAACATTACGGTTTTTTGAGATTAATTTCATTGTGCACATTA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTGAACATTACGGTTTTTTGAGATTAATTTCATTGTGCACATTA  1048

seq1  GTTAAAAAGAAGTTTCTGATTTGAGAGAGGGGGAGAGGAAGAAGGAGGGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAGAAGTTTCTGATTTGAGAGAGGGGGAGAGGAAGAAGGAGGGA  1098

seq1  GGGAGGGATGGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGATGGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGA  1148

seq1  GAGAGAGATCTTTGTGGAATTC  1160
      ||||||||||||||||||||||
seq2  GAGAGAGATCTTTGTGGAATTC  1170