BAC Information

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BAC

Clone NameB6Ng01-307G08
Chromosome13 (Build37)
Map Location 66,741,744 - 66,854,784
singlet/doubletdoublet
Overlap geneMzf6d, Vmn2r-ps106, LOC666027
Upstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
Downstream geneLOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307G08.bB6Ng01-307G08.g
ACCGA100180GA100181
length1,126495
definitionB6Ng01-307G08.b B6Ng01-307G08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,853,658 - 66,854,784)(66,741,744 - 66,742,249)
sequence
gaattctgcaacatatgagaaggtgaaaagtagaaattattggaatagaa
gaagaatatcagctcaaaggtctagaaaatattttcagtgaaattttaaa
agaaaaattttctaaaataaagaagaaaatacctattaaagtacaagaag
catccaaaatagcaaacatattggaccaaaaaagtctttgttccacaaac
tgtcaaaactctaaacatataaagcaaagaaatatgaaaaagtgcaacag
aaagaaactaaaagctaaacaaaacaaaaacaagtaacgtatggaagcag
acctattagcttcatatctgtcttctcaatgtctactagaaaagacaaca
gtgtttggaccgttttgtgctgcatagtgaaagaaactacccatgtttct
aaaagaaagcaactggtcaaaatgttttggacagatttagaatgagctat
gataatgaagttattcagaggtcactgcctgagacctcacaggtggtcac
atttggatgatgcttcccatgcagccccagaaaggaccgaccaccccatc
tcccaaggctcaaccacctgcccctacccattgtgggcagtgatcctgtg
ctcaccatgtctaaatctcagagcttcctgaggtcccctcaatgcacccg
acagcagatctcagagcaggacatagagaaccattcaagcctgcacagcc
acagcaatcttttagaaaggcacccggaagatcctgcctctttgtctgac
tggcatgtctgcctggcgaccttgattggccagtgagtcttacccctcct
caatgttaaagtgtgcttcctgtcgaaggctggactttttccagacctca
gaatcccttttcagctcattagcatttgtgcttgccctgggtgaagaatc
caccattccagctcaggctattctgctgccagcttctcccctctgtgagc
aatgatccctgacttcagaccttgcctgaacattcctcatagcacttgcc
ttctttttcctgaaatcaaggtgagtagcttcatagccatttactctagt
tgcattgtagttatcaatctgaccagtattgatggtggccaagcctataa
cattaaatgattttagaaacaacagg
cagcaggtgctgtgatattttgtaccttcttttggtggagggacagatgt
ctccgtgtcatggaatctggctccctcttgtggcctgcaggtgtaaaagc
aggcagaactctgtatacttaataaataaatatatttttaaaaaaggaga
ggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaa
ggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaa
ggaaaggaaaggaaaggaaaggaaaggacaggacaggacaggacaggaca
ggaaaggaaaggaaagggaaaaggaaagaggaaaaaaagaggaaagggaa
aggaaagaggaaaggaaagaggaaaaaaagaggaaagaggaaaggaaaga
ggacaggaaaggaaagggaaaggaaaagggaaaaaggggaaaagggaaag
gagggaaaaagggaaaggagggaaaggagggaaaggagggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66853658_66854784
seq2: B6Ng01-307G08.b_49_1171 (reverse)

seq1  CCTGTTGTTTTCTAAAATTCCTTTTTAATGTTAATAGCCTGGCCACCCTT  50
      ||||||| ||||||||||     ||||||||||   || |||||||| | 
seq2  CCTGTTG-TTTCTAAAAT---CATTTAATGTTATAGGCTTGGCCACCAT-  45

seq1  CCATTCCTGGGTCAGATTGATACCTACAATGTAACTAGAGTAATGGGCTA  100
       || | || ||||||||||||| |||||||| |||||||||||  |||||
seq2  -CAATACT-GGTCAGATTGATAACTACAATGCAACTAGAGTAAATGGCTA  93

seq1  TTCAAGCTACTCACCTTGATTTCAGGAAAAAGAAGGCAAGTGCTATGAAG  150
       | ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -TGAAGCTACTCACCTTGATTTCAGGAAAAAGAAGGCAAGTGCTATGAGG  142

seq1  AATGTTCAGGCAAGGTCTGAAGT-AAGGATCATTGCTCACAGAGGGGAGG  199
      ||||||||||||||||||||||| | ||||||||||||||||||||||| 
seq2  AATGTTCAGGCAAGGTCTGAAGTCAGGGATCATTGCTCACAGAGGGGAGA  192

seq1  AGCTGGCAGCTG-ATTGCCTGAGCTGGAATGGTGGATTCTTCCCCCAGGG  248
      |||||||||| | || |||||||||||||||||||||||||| |||||||
seq2  AGCTGGCAGCAGAATAGCCTGAGCTGGAATGGTGGATTCTTCACCCAGGG  242

seq1  CAAGCACAAATGCTAATGAGCTGAAAAGGGCTCCAGAGATCTGGAAAAGG  298
      |||||||||||||||||||||||||||||| | | ||| ||||||||| |
seq2  CAAGCACAAATGCTAATGAGCTGAAAAGGGATTCTGAGGTCTGGAAAAAG  292

seq1  TCCAGCCTTCGACAGGAAGCAAACTTTAACATTGAGGAGGGGTAAGACTC  348
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCAGCCTTCGACAGGAAGCACACTTTAACATTGAGGAGGGGTAAGACTC  342

seq1  ACTGGCCAATCAAGGTCGCCAGGCAGATATGCCAGTCAGACAAAGAGGCG  398
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  ACTGGCCAATCAAGGTCGCCAGGCAGACATGCCAGTCAGACAAAGAGGCA  392

seq1  GGATCTTCCGGATGCCTTTCTACAAGATTGCTGGGGCTGTGCAGGCTTGA  448
      ||||||||||| |||||||||| |||||||||| ||||||||||||||||
seq2  GGATCTTCCGGGTGCCTTTCTAAAAGATTGCTGTGGCTGTGCAGGCTTGA  442

seq1  ATGGTTCTCTGTGTCCTGCTCTGAGATCTGCTGTCGGGTGCATTGAGGGG  498
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCTCTATGTCCTGCTCTGAGATCTGCTGTCGGGTGCATTGAGGGG  492

seq1  ACCTCAGGAAGCTCTGAGATTTAGACATGGTGAGCACAGGATCACTGCCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGGAAGCTCTGAGATTTAGACATGGTGAGCACAGGATCACTGCCC  542

seq1  ACAATGGGTAGGGGAAGGTGGTTGAGCCGTGGGAGATGGGATGGTGGGTC  598
      |||||||||||||| ||||||||||||| ||||||||||| |||| ||||
seq2  ACAATGGGTAGGGGCAGGTGGTTGAGCCTTGGGAGATGGGGTGGTCGGTC  592

seq1  CTTTCTGGGGCTGCATGGGAAGCATCACCCAGATGGGACCACCTGTGAGG  648
      ||||||||||||||||||||||||||| ||| ||| ||||||||||||||
seq2  CTTTCTGGGGCTGCATGGGAAGCATCATCCAAATGTGACCACCTGTGAGG  642

seq1  TCTCAGGCAGTGACCTCTGAATAACTTCATTATCATAGCTGATTCTGAAT  698
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  TCTCAGGCAGTGACCTCTGAATAACTTCATTATCATAGCTCATTCTAAAT  692

seq1  CTGTCCAAAACATTTGCTCCAGTTGCTTTCTTGTAGAAACATGGGTGGTT  748
      |||||||||||||||   |||||||||||||| ||||||||||||| |||
seq2  CTGTCCAAAACATTTTGACCAGTTGCTTTCTTTTAGAAACATGGGTAGTT  742

seq1  TCTTTGACTCTGCAGCACAAAACGATCCAAACACTGTTGTCTTTACTAGT  798
      ||||| ||| |||||||||||||| ||||||||||||||||||| |||||
seq2  TCTTTCACTATGCAGCACAAAACGGTCCAAACACTGTTGTCTTTTCTAGT  792

seq1  AGACATTGAGAAGACAGATATGAAGCTAATAGGTCTGCTTCCATACGTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTGAGAAGACAGATATGAAGCTAATAGGTCTGCTTCCATACGTTA  842

seq1  CTTGTTTTTGTTTTATTTAGTTTTTTATTTCTTTCTGTTGCAGTTTTTCA  898
      |||||||||||||| ||||| ||||  ||||||||||||||| |||||||
seq2  CTTGTTTTTGTTTTGTTTAGCTTTTAGTTTCTTTCTGTTGCACTTTTTCA  892

seq1  TATTTCTTTGCTTTATATGTTTAGAGTTTTGACTGTTATGTGGCAAAAGG  948
      ||||||||||||||||||||||||||||||||| ||| ||||| | || |
seq2  TATTTCTTTGCTTTATATGTTTAGAGTTTTGACAGTT-TGTGGAACAAAG  941

seq1  ACTTTTTTGGTCCAATCTATTTGCTATTTTGGATGCTTCTTGTACTTTGA  998
      |||||||||||||||| | ||||||||||||||||||||||||||||| |
seq2  ACTTTTTTGGTCCAATATGTTTGCTATTTTGGATGCTTCTTGTACTTTAA  991

seq1  TAGGTATT---TTCTTTAGTTTAGAAAATTTTTCATTCATAATTTCACTG  1045
      ||||||||   ||||||| ||||||||||||||| || | ||||||||||
seq2  TAGGTATTTTCTTCTTTATTTTAGAAAATTTTTCTTTTAAAATTTCACTG  1041

seq1  AAAATATTTTCTAGACCTTTGAGCTGATATTCTTCTTCTATTCCAATAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTCTAGACCTTTGAGCTGATATTCTTCTTCTATTCCAATAAT  1091

seq1  TTCTACTTTTCACCTTCTCATATGTTGCAGAA  1127
      ||||||||||||||||||||||||||||||||
seq2  TTCTACTTTTCACCTTCTCATATGTTGCAGAA  1123

seq1: chr13_66741744_66742249
seq2: B6Ng01-307G08.g_66_566

seq1  GAATTCCAGCA-GTGCTGTGATATTTTGTACCTTCTTTTGGTGGAGGGAC  49
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAGGTGCTGTGATATTTTGTACCTTCTTTTGGTGGAGGGAC  50

seq1  AGATGTCTCCGTGTCATGGAATCTGGCTCCCTCTTGTGGCCTGCAGGTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTCCGTGTCATGGAATCTGGCTCCCTCTTGTGGCCTGCAGGTGT  100

seq1  AAAAGCAGGCAGAACTCTGTATACTTAATAAATAAATATATTTTTAAAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGCAGAACTCTGTATACTTAATAAATAAATATATTTTTAAAAA  150

seq1  AGGAGAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  200

seq1  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  250

seq1  AGGACAGGACAGGACAGGACAGGACAGGACAGGACAGGACAGGACAGGAC  299
      |||| |||| |||| |||| |||| |||| ||||||||||||||||||||
seq2  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGACAGGACAGGACAGGAC  300

seq1  AGGAAAGGAAAGGGAAAAGGAAAGGGAAAAGGAAAGAGGAAAAAAAGAGG  349
      |||| ||||||||  |||||||||||||||||||||||||||||||||||
seq2  AGGACAGGAAAGG--AAAGGAAAGGGAAAAGGAAAGAGGAAAAAAAGAGG  348

seq1  AAAGGGAAAGGAAAGAGGAAAGGAA--AGGAAAAAAAGAGGAAAGAGGAA  397
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  AAAGGGAAAGGAAAGAGGAAAGGAAAGAGGAAAAAAAGAGGAAAGAGGAA  398

seq1  AGGAAAGAGGACAGGAAAGGAAAGGGAAAGGAAAAGGGAAAAAGGGGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAGGACAGGAAAGGAAAGGGAAAGGAAAAGGGAAAAAGGGGAAA  448

seq1  AGGGAAAGGAGGGAAAAAGGGAAAGGAGGGAAAGGAGGGAAAGGGAAAGG  497
      |||||||||||||||||||||||||||||||||||      |||||||||
seq2  AGGGAAAGGAGGGAAAAAGGGAAAGGAGGGAAAGG------AGGGAAAGG  492

seq1  AGGGAAAGG  506
      |||||||||
seq2  AGGGAAAGG  501