BAC Information

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BAC

Clone NameB6Ng01-309D09
Chromosome13 (Build37)
Map Location 12,833,899 - 12,834,989
singlet/doubletsinglet
Overlap genenone
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757
Downstream genePrl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309D09.bB6Ng01-309D09.g
ACCGA101508GA101509
length1,1691,091
definitionB6Ng01-309D09.b B6Ng01-309D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctattgaaattctggtgaggattacactgaatttgtagattgttt
cttgttggatggccattttcacactattaatcctgccaatccatgagcct
gggaggttttacgtcctctggtgactgcctcagtttctcttttaatgttt
aaacattttcactatgcaatgcttacatttctttttttaattttattcca
agaatttaatttttagtttgaagaaattgttgatggtattgtttccttga
tttcttttctcatttttttttccatttggtaaatagaaaaggctgcaaag
gtctctatgttactttagtattctactacattgctggatgtctttataag
ttctagggtatttctggtaatgtatttaaagttttttccataaagaatta
tataatcttcataatatatttttgacatcttccatttccttagcatcatt
aacttactactttagcaaagacttcaagtactatttggaaaaacggaaag
atttattattttcatatttatggcaatgctgtggatgtttctccatttaa
atgatgattaatgtacattgcctttatcatgttgagacctgttccccaca
tccatatttttccagaatttttatcatgaatggattggagattttatcag
aggtattttccagatctaataagataataatggatctgccctttagtcaa
tttgtgtgaaatttatgtatcttgatttacccttgcatctcctggatgaa
tccaatttgcaaatattgtattgagaagtttggtatatatgtacatgaaa
gatactggcttataacttcttttttgttggtattgtttggatatcaaaat
aataatgaatttataaaaagaatgtggaatttttcctttactctgcagtc
taacatgtaatagtcatattagttcattgaatgtctaggagaattctgtt
ctgacctttggactttgggacttttttttccagttgagagatatttatta
tttaaaataagtatttaatattcttttcactaatgtatatttcatatact
cactggattggatttatagtgtgcatatggaaatttattctatggcttgg
ctttaattccttgggttcgatgacttcagattatttcaactttatttctt
caccttcaagtcggtacag
gaattccatatttggaagattgattcatattaaatacatttcttaattct
aactatttgatatatgttgatgttctctcacaaataagtagtaaatcaca
ttgtattcacatacctaaattctgttatttgtgaagcatttgactagaat
aagacaattatatagacagattttatataatatcaataaaaattatgact
gacttacttctcaatattgcaggcattgctaaagtgccagtttctaatat
taaagaacagtctcattgaacccaggattgttttaaagagaaaatattaa
aggaagcttcaccccagtgcatcaatgaacaccttagaaacagaaggttc
atatttgagatgaaaatattgtgatggaccatttgtttattaattgaggg
tcttgagaattttttcagtcttactccaatgtttgtgcaggcagcagaac
aattataagaaacaaacaattgtcttcattggttggttgcagggacacca
gtcctggtcagataggacacttctaattttcttcatctcatctctgaacc
taatcaccaggaacagagtcagtgagataggaatagaactttagtatact
ttagggccctgttctttctaagtactgaatacagatttgagaaaagtaag
gattgcgaaatacatatggtatttcatggatgtgagctggaataccctaa
atgaatagacacttagcttctgtaaatccaagataaagtacgctctcaca
agagttgacaaatgaacaatgggcaagttgctactcaactgtagacatgg
atttgacaaagaaacagtgaagacactagatttgcttctattactaaagg
gatttcacaaatcttcagtaaaggtccttgagttcttctttgtacctcat
gggcttctgatattacaccatcttttcttgttttctatgaaataaatttc
tccaataatgcatgaatcctagtccttcagtcaaagaggctgacacttga
tggttttagatgtacatagtcagggatactattcagaatctgctgaggta
agtttgccatctgtcctttctgacatgaatgggtatgatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12833899_12834989
seq2: B6Ng01-309D09.g_67_1157

seq1  GAATTCCATATTTGGAAGATTGATTCATATTAAATACATTTCTTAATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTTGGAAGATTGATTCATATTAAATACATTTCTTAATTCT  50

seq1  AACTATTTGATATATGTTGATGTTCTCTCACAAATAAGTAGTAAATCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTGATATATGTTGATGTTCTCTCACAAATAAGTAGTAAATCACA  100

seq1  TTGTATTCACATACCTAAATTCTGTTATTTGTGAAGCATTTGACTAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCACATACCTAAATTCTGTTATTTGTGAAGCATTTGACTAGAAT  150

seq1  AAGACAATTATATAGACAGATTTTATATAATATCAATAAAAATTATGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATTATATAGACAGATTTTATATAATATCAATAAAAATTATGACT  200

seq1  GACTTACTTCTCAATATTGCAGGCATTGCTAAAGTGCCAGTTTCTAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACTTCTCAATATTGCAGGCATTGCTAAAGTGCCAGTTTCTAATAT  250

seq1  TAAAGAACAGTCTCATTGAACCCAGGATTGTTTTAAAGAGAAAATATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACAGTCTCATTGAACCCAGGATTGTTTTAAAGAGAAAATATTAA  300

seq1  AGGAAGCTTCACCCCAGTGCATCAATGAACACCTTAGAAACAGAAGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCTTCACCCCAGTGCATCAATGAACACCTTAGAAACAGAAGGTTC  350

seq1  ATATTTGAGATGAAAATATTGTGATGGACCATTTGTTTATTAATTGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAGATGAAAATATTGTGATGGACCATTTGTTTATTAATTGAGGG  400

seq1  TCTTGAGAATTTTTTCAGTCTTACTCCAATGTTTGTGCAGGCAGCAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGAATTTTTTCAGTCTTACTCCAATGTTTGTGCAGGCAGCAGAAC  450

seq1  AATTATAAGAAACAAACAATTGTCTTCATTGGTTGGTTGCAGGGACACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAGAAACAAACAATTGTCTTCATTGGTTGGTTGCAGGGACACCA  500

seq1  GTCCTGGTCAGATAGGACACTTCTAATTTTCTTCATCTCATCTCTGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGTCAGATAGGACACTTCTAATTTTCTTCATCTCATCTCTGAACC  550

seq1  TAATCACCAGGAACAGAGTCAGTGAGATAGGAATAGAACTTTAGTATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACCAGGAACAGAGTCAGTGAGATAGGAATAGAACTTTAGTATACT  600

seq1  TTAGGGCCCTGTTCTTTCTAAGTACTGAATACAGATTTGAGAAAAGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCCCTGTTCTTTCTAAGTACTGAATACAGATTTGAGAAAAGTAAG  650

seq1  GATTGCGAAATACATATGGTATTTCATGGATGTGAGCTGGAATACCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCGAAATACATATGGTATTTCATGGATGTGAGCTGGAATACCCTAA  700

seq1  ATGAATAGACACTTAGCTTCTGTAAATCCAAGATAAAGTACGCTCTCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAGACACTTAGCTTCTGTAAATCCAAGATAAAGTACGCTCTCACA  750

seq1  AGAGTTGACAAATGAACAATGGGCAAGTTGCTACTCAACTGTAGACATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGACAAATGAACAATGGGCAAGTTGCTACTCAACTGTAGACATGG  800

seq1  ATTTGACAAAGAAACAGTGAAGACACTAGATTTGCTTCTATTACTAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAAAGAAACAGTGAAGACACTAGATTTGCTTCTATTACTAAAGG  850

seq1  GATTTCACAAATCTTCAGT-AAGGTCCTTGAGTTCTTCTTTGTACCTCAT  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATTTCACAAATCTTCAGTAAAGGTCCTTGAGTTCTTCTTTGTACCTCAT  900

seq1  -GGCTTCTGATATTACACCATCTTTTCTTGTTTTCTATGAAATAAA-TTC  947
       ||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGCTTCTGATATTACACCATCTTTTCTTGTTTTCTATGAAATAAATTTC  950

seq1  TCCAAATAATGCATGAATCCTAGTCCTTCAGGTCAAAGAGGCTGACACTT  997
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCC-AATAATGCATGAATCCTAGTCCTTCA-GTCAAAGAGGCTGACACTT  998

seq1  GATGGTTTAGGATGTACATAGTCAAGGGATAACTATTCAGAAATCTGCTG  1047
      ||||||||  ||||||||||||| |||||| ||||||||| |||||||||
seq2  GATGGTTTTAGATGTACATAGTC-AGGGAT-ACTATTCAG-AATCTGCTG  1045

seq1  AGGTAA-TTTGGCATCTGT-CTTTCTGACCATGAAT-GGTATGATCC  1091
      |||||| |||| ||||||| |||||||| ||||||| ||||||||||
seq2  AGGTAAGTTTGCCATCTGTCCTTTCTGA-CATGAATGGGTATGATCC  1091