BAC Information

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BAC

Clone NameB6Ng01-309L15
Chromosome13 (Build37)
Map Location 53,027,695 - 53,028,801
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040321, Diras2, LOC100040572, Syk, Auh
Downstream geneNfil3, Ror2, Sptlc1, LOC100040421, Msx2, EG432760, E130119H09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309L15.bB6Ng01-309L15.g
ACCGA101896GA101897
length1,2041,107
definitionB6Ng01-309L15.b B6Ng01-309L15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatatgttggatattagtc
ccctatcggatttaggataggtaaagatcctttcccaatctgttggtggt
ctttttgtcttattgacggtgtcttttgccttgcagaaactttggagttt
cattaggtcccatttgtcaattctcgatcttacagcacaagccattgctg
ttctgttcaggaattttccccctgtgcccatatcttcaaggcttttcccc
actttctcctctataagtttcagtgtctctggttttatttgaagttcctt
gatccacttagatttgaccttagtacaaggagataagtatggatcgattc
gcattcttctacatgataacaaccagttgtgccagcaccaattgttgaaa
atgctgtctttcttccactggattgtgttagctcccttgtcgaagatcaa
gtgaccataggtgtgtgggttcttttctgggtcttcaattctgttccatt
ggtctacttgtctgtcgctataccagtaccatgcagtttttatcacaatt
gctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctaggttttttgttattcaaga
tgaatttgcaaatttctccttctaattcgttgaagaattgagttggaatt
ttgatggggattgcattgaatctgtagattgcttttggcaagatagccat
ttttacaatgttgatcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttttttaatttctttcttcagagacttgaagtttttatca
tacagatctttcactttccttagttagagtcacgcccgagatatttttat
attatttgtgactattgagaagggtgttgttccctaaatttctttctcag
cctgtttattctttgtgtagagaaaggccatggacttgtttggagttatt
ttatatcagctacttcaccgaaagcttgtttatcaggttaggagtctctt
gggtggaagtttaagggttcacttatatatacttatcaattcagtctggc
agagtagatattttgaaccttccctccttatccaaagtgtgtgatacccc
cccg
gaattcattctttcttgtcctttaagcccttgtccagtaggtagaattgt
gtacatgtcctctagctcttctgtcctcctgtggtgcgaagggggacagg
acagggtatccagtcttctctggctgccacaaatcaggtggcttaaacaa
cagatttgatttcctcatagacgtggaggtgggaatacaaagtcacagtg
ctggcaaggtcagtttcttctgaggcttatcttccgggctggcagatggt
caccttctcattttgtccccacatgacttctccactgtattcgcctgtcc
ctggtgtttcttcctctgccgagaaggctgtagtccaggtgtagagctgg
cctggcaggaatgaggatgttctaaacagacatttgtgtctctccatttg
accttgagattattgaaacaatgggccccaaagacatggggatttctccc
caggggcccccaggggtccccagggagaaggaaaaggtgccagagagaga
agacacctaatcctggaaagagatttcacccagtcctacaactcatttga
ctactttccttgctgcttctggagcccagatactgtgggcaggaccacac
ctttactggaactacttagatgtgcacatccatctagattgtttttagtg
gcttccctttctctcagattagaccccacttaccaggcatggtatacctt
caatcccaacactcagtaaactcagtaggccatcctgagctatacagtga
gtttaaatccagcctgggctacataagaacccatttccaatagctaagcc
actgcttttaggaggtccataatagagcagcagatgacagttcggtcagt
ctctctctgtggtttatgacaatccagaaatcactcctcaccttccaccc
cccagccgcagcaggatagaatgtactgcagggctttggaagtaccgttc
tttttgctactttgctactcctgtgtcaggtccataactatctcactgaa
taagcatttgccatgaacaatcgcagcagaaatcatggtgcacttctgtg
agcttacagagctgcatcaagttcagaatgaagctccatgaatttcatca
ttccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_53027695_53028801
seq2: B6Ng01-309L15.g_67_1173

seq1  GAATTCATTCTTTCTTGTCCTTTAAGCCCTTGTCCAGTAGGTAGAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTTCTTGTCCTTTAAGCCCTTGTCCAGTAGGTAGAATTGT  50

seq1  GTACATGTCCTCTAGCTCTTCTGTCCTCCTGTGGTGCGAAGGGGGACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGTCCTCTAGCTCTTCTGTCCTCCTGTGGTGCGAAGGGGGACAGG  100

seq1  ACAGGGTATCCAGTCTTCTCTGGCTGCCACAAATCAGGTGGCTTAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTATCCAGTCTTCTCTGGCTGCCACAAATCAGGTGGCTTAAACAA  150

seq1  CAGATTTGATTTCCTCATAGACGTGGAGGTGGGAATACAAAGTCACAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTGATTTCCTCATAGACGTGGAGGTGGGAATACAAAGTCACAGTG  200

seq1  CTGGCAAGGTCAGTTTCTTCTGAGGCTTATCTTCCGGGCTGGCAGATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAGGTCAGTTTCTTCTGAGGCTTATCTTCCGGGCTGGCAGATGGT  250

seq1  CACCTTCTCATTTTGTCCCCACATGACTTCTCCACTGTATTCGCCTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTCATTTTGTCCCCACATGACTTCTCCACTGTATTCGCCTGTCC  300

seq1  CTGGTGTTTCTTCCTCTGCCGAGAAGGCTGTAGTCCAGGTGTAGAGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTTCTTCCTCTGCCGAGAAGGCTGTAGTCCAGGTGTAGAGCTGG  350

seq1  CCTGGCAGGAATGAGGATGTTCTAAACAGACATTTGTGTCTCTCCATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAGGAATGAGGATGTTCTAAACAGACATTTGTGTCTCTCCATTTG  400

seq1  ACCTTGAGATTATTGAAACAATGGGCCCCAAAGACATGGGGATTTCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGATTATTGAAACAATGGGCCCCAAAGACATGGGGATTTCTCCC  450

seq1  CAGGGGCCCCCAGGGGTCCCCAGGGAGAAGGAAAAGGTGCCAGAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCCCCCAGGGGTCCCCAGGGAGAAGGAAAAGGTGCCAGAGAGAGA  500

seq1  AGACACCTAATCCTGGAAAGAGATTTCACCCAGTCCTACAACTCATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTAATCCTGGAAAGAGATTTCACCCAGTCCTACAACTCATTTGA  550

seq1  CTACTTTCCTTGCTGCTTCTGGAGCCCAGATACTGTGGGCAGGACCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCCTTGCTGCTTCTGGAGCCCAGATACTGTGGGCAGGACCACAC  600

seq1  CTTTACTGGAACTACTTAGATGTGCACATCCATCTAGATTGTTTTTAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTGGAACTACTTAGATGTGCACATCCATCTAGATTGTTTTTAGTG  650

seq1  GCTTCCCTTTCTCTCAGATTAGACCCCACTTACCAGGCATGGTATACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTTTCTCTCAGATTAGACCCCACTTACCAGGCATGGTATACCTT  700

seq1  CAATCCCAACACTCAGTAAACTCAGTAGGCCATCCTGAGCTATACAGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCAACACTCAGTAAACTCAGTAGGCCATCCTGAGCTATACAGTGA  750

seq1  GTTTAAATCCAGCCTGGGCTACATAAGAACCCATTTCCAATAGCTAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAATCCAGCCTGGGCTACATAAGAACCCATTTCCAATAGCTAAGCC  800

seq1  ACTGCTTTTAGGAGGTCCATAATAGAGCAGCAGATGACAGTTCGGTCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTTAGGAGGTCCATAATAGAGCAGCAGATGACAGTTCGGTCAGT  850

seq1  CTCTCTCTGTGGTTTATGACAATCCAGAAATCAC-CCCCACC-TCCA-CC  897
      |||||||||||||||||||||||||||||||||| || |||| |||| ||
seq2  CTCTCTCTGTGGTTTATGACAATCCAGAAATCACTCCTCACCTTCCACCC  900

seq1  CCCAGCCGCAGCA-GATAGAATGTACTGCAGGGCTTT-GAAGTACCGTTC  945
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  CCCAGCCGCAGCAGGATAGAATGTACTGCAGGGCTTTGGAAGTACCGTTC  950

seq1  -TTTTGCTACTTTGCTACTCCTGTGTCAGGTCCATAACTATCTCACTGAA  994
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTACTTTGCTACTCCTGTGTCAGGTCCATAACTATCTCACTGAA  1000

seq1  TAAAGCATTTGCCCATGAAC-ATCGCAGCAAGAAAAATCATGGTGCACTT  1043
      | ||||||||| |||||||| ||||||||   | ||||||||||||||||
seq2  T-AAGCATTTG-CCATGAACAATCGCAGC---AGAAATCATGGTGCACTT  1045

seq1  CTGTTGAGCCTACCAGAGCTGCATCAAAGTCAGGATGAAGCCCCATG-AT  1092
      ||| ||||| || ||||||||||||||  |||| ||||||| ||||| ||
seq2  CTG-TGAGCTTA-CAGAGCTGCATCAAGTTCAGAATGAAGCTCCATGAAT  1093

seq1  TCCATCATCCCCCTG  1107
      | ||||||  |||||
seq2  TTCATCAT-TCCCTG  1107