MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-310B15
Chromosome	9 (Build37)	13 (Build37)
Map Location	46,287,364 - 46,288,255	85,243,632 - 85,243,776
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Dscaml1, Cep164, LOC640094, Bace1, Rnf214, Pcsk7, Tagln, Sidt2, Pafah1b2, 2610005M20Rik, BC033915, Apoa1, Apoc3, Apoa4, Apoa5, Zfp259, Bud13, 4931429L15Rik, LOC100042722
Downstream gene	EG667890, 2900052N01Rik, D930036J05
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dscaml1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114873 MGI:2150309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cep164 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214552 MGI:2384878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC640094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 51 ESTs, 24 Proteins pseudo : _no_value

name	Bace1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23821 MGI:1346542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf214 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235315 MGI:2444451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcsk7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18554 MGI:107421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tagln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21345 MGI:106012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sidt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214597 MGI:2446134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pafah1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18475 MGI:108415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610005M20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70308 MGI:1917558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs

name	BC033915 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70661 MGI:2446296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11806 MGI:88049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11814 MGI:88055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11808 MGI:88051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66113 MGI:1913363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp259 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22687 MGI:1330262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bud13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215051 MGI:2443443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931429L15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74361 MGI:1921611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	LOC100042722 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667890 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667890 MGI:3644829
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	2900052N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D930036J05 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Dscaml1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486900 GeneID:114873 MGI:2150309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome cell adhesion molecule-like 1 transcript_id : NM_001081270.1

name	Cep164 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487016 GeneID:214552 MGI:2384878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 164 transcript_id : NM_001081373.1

name	Bace1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366371 GeneID:23821 MGI:1346542
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-site APP cleaving enzyme 1 transcript_id : NM_011792.4

name	Rnf214 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802103 GeneID:235315 MGI:2444451
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 214 transcript_id : NM_178709.3

name	Pcsk7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181189 GeneID:18554 MGI:107421
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proprotein convertase subtilisin/kexin type 7 transcript_id : NM_008794.2

name	Tagln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362320 GeneID:21345 MGI:106012
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transgelin transcript_id : NM_011526.3

name	Sidt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802169 GeneID:214597 MGI:2446134
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SID1 transmembrane family, member 2 transcript_id : NM_172257.2

name	Pafah1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067117 GeneID:18475 MGI:108415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit transcript_id : NM_008775.3

name	2610005M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259920 GeneID:70308 MGI:1917558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs product : RIKEN cDNA 2610005M20 gene transcript_id : XM_001478675.1

name	BC033915 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51890216 GeneID:70661 MGI:2446296
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC033915 transcript_id : NM_027498.2

name	Apoa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803330 GeneID:11806 MGI:88049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-I transcript_id : NM_009692.2

name	Apoc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344172 GeneID:11814 MGI:88055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein C-III transcript_id : NM_023114.3

name	Apoa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347472 GeneID:11808 MGI:88051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-IV transcript_id : NM_007468.2

name	Apoa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372938 GeneID:66113 MGI:1913363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-V transcript_id : NM_080434.3

name	Zfp259 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778942 GeneID:22687 MGI:1330262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 259 transcript_id : NM_011752.2

name	Bud13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130241 GeneID:215051 MGI:2443443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BUD13 homolog (yeast) transcript_id : NM_146000.2

name	4931429L15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259951 GeneID:74361 MGI:1921611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : RIKEN cDNA 4931429L15 gene transcript_id : XM_001479853.1

name	LOC100042722 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259922 GeneID:100042722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042722 transcript_id : XM_001478689.1

name	D930036J05 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259953 GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein D930036J05 transcript_id : XM_001479857.1

name	Dscaml1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486901 GeneID:114873 MGI:2150309
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS]; GO:0016337 - cell-cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Down syndrome cell adhesion molecule-like protein product : Down syndrome cell adhesion molecule-like 1 protein_id : NP_001074739.1

name	Cep164 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487017 GeneID:214552 MGI:2384878
definition	codon_start : 1 product : centrosomal protein 164 protein_id : NP_001074842.1

name	Bace1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981412 CCDS:CCDS23135.1 GeneID:23821 MGI:1346542
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0005768 - endosome [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0009049 - aspartic-type signal peptidase activity [Evidence IEA]; GO:0004175 - endopeptidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004194 - pepsin A activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0050435 - beta-amyloid metabolism [Evidence ISS]; GO:0006509 - membrane protein ectodomain proteolysis [Evidence ISS]; GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : APP beta-secretase product : beta-site APP cleaving enzyme 1 protein_id : NP_035922.3

name	Rnf214 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520119 CCDS:CCDS23136.1 GeneID:235315 MGI:2444451
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 214 protein_id : NP_848824.1

name	Pcsk7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181190 GeneID:18554 MGI:107421
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0004289 - subtilase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : proprotein convertase subtilisin/kexin type 7 protein_id : NP_032820.2

name	Tagln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755714 CCDS:CCDS23137.1 GeneID:21345 MGI:106012
definition	GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IMP]; GO:0007517 - muscle development [Evidence IEA] codon_start : 1 note : SM-22 alpha product : transgelin protein_id : NP_035656.1

name	Sidt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986551 CCDS:CCDS23138.1 GeneID:214597 MGI:2446134
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : SID1 transmembrane family, member 2 protein_id : NP_758461.1

name	Pafah1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254624 CCDS:CCDS23139.1 GeneID:18475 MGI:108415
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0003847 - 1-alkyl-2-acetylglycerophosphocholine esterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] [Evidence IGI] codon_start : 1 product : platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit protein_id : NP_032801.2

name	2610005M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259921 GeneID:70308 MGI:1917558
definition	codon_start : 1 product : hypothetical protein LOC70308 protein_id : XP_001478725.1

name	BC033915 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51890217 CCDS:CCDS23140.1 GeneID:70661 MGI:2446296
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70661 protein_id : NP_081774.2

name	Apoa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753096 GeneID:11806 MGI:88049
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IMP]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0030300 - regulation of cholesterol absorption [Evidence IDA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : acts as a cofactor for the lecithin cholesterol acyltransferase product : apolipoprotein A-I protein_id : NP_033822.1

name	Apoc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15421856 CCDS:CCDS23141.1 GeneID:11814 MGI:88055
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein C-III protein_id : NP_075603.1

name	Apoa4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347473 CCDS:CCDS23142.1 GeneID:11808 MGI:88051
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0030300 - regulation of cholesterol absorption [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein A-IV protein_id : NP_031494.2

name	Apoa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560003 CCDS:CCDS23143.1 GeneID:66113 MGI:1913363
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0017129 - triglyceride binding [Evidence IDA] GO_process : GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein A-V protein_id : NP_536682.2

name	Zfp259 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756053 CCDS:CCDS23144.1 GeneID:22687 MGI:1330262
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IDA] codon_start : 1 product : zinc finger protein 259 protein_id : NP_035882.1

name	Bud13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122459 CCDS:CCDS23145.1 GeneID:215051 MGI:2443443
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] codon_start : 1 product : BUD13 homolog protein_id : NP_666112.1

name	4931429L15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259952 GeneID:74361 MGI:1921611
definition	codon_start : 1 product : hypothetical protein LOC74361 protein_id : XP_001479903.1

name	LOC100042722 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259923 GeneID:100042722
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478739.1

name	D930036J05 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259954 GeneID:215467
definition	codon_start : 1 product : similar to LRRGT00042 protein_id : XP_001479907.1

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 2 pseudo : _no_value

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 1 pseudo : _no_value

name	LOC640094 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259950 GeneID:640094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 51 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_034358.1

name	2900052N01Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149259924 GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 2900052N01 gene transcript_id : XR_035381.1

clone name	MSMg01-273B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-310B15.b	B6Ng01-310B15.g
ACC	GA102172	GA102173
length	898	455
definition	B6Ng01-310B15.b	B6Ng01-310B15.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(46,287,364 - 46,288,255)	(85,243,632 - 85,243,776)
sequence	gaattcacccttgaccctcagggaggtgctggaaggtctccctgtggcct ggccctgagaccctgcctcttatcaggggccccacacactataagcaagt cagaaaagctgaagacagaaagaatagagccaccccctccagatctctct ctctctctctctctctctctctctctctctctctctctctggtgtgattt cgccacgtctcatcttttcctgcctcattggagacaatagtaaacacttc atctcattgccgaggatgcttcttaattaccaaagtaatgtcacaatatt cccaattaattaattctaatctggcccagaagagaggtctcgcatacagt cacctctttgtgcttctggagcagaggaccaacgctacagatatggtgac tgaagtgtgttcgtatggagttatcaaatactatctgcaatcaggatgtc accatacgcttactcttccacattcttgcatattaaatgaattttcatat cacatttcccaacaaacactgcttcaagtcaacccttatttatttaataa ctccatgcaaatgtttcaaaggaaatgtttcaaaaactattaccttgggc tggccttgaagtggggagggaactctctggatgggaagtgaggaactgtc cctctgtatctgctggggcagaggcagtcctttgaccttgttactatgct cctctaccccaggtgtcaccagtcccaagacccctgaagtctcaggggga gacagcaacccttctacaataaccccctgccccaaccctggctttgtcca cttacagatgacctatggcagcctctcagcgctcagatagcctcatgctt ttgggattacacccattggtgtgtatgtaatgtgtgtctgtctgtgtg	aatattctgtaagtatctgttaagtttatttggtttataatgtctgatct ggtatttctcgatttagtttttatctggatgacctatctattggtgagag cagaagattgaagtctcccactatcagggtgtgagggtcactatgtgaat taagcttagtagtatttctttcataaacttggatgctcttgtgtttggtg aatggatgtgaagaattataatgtcctcttggtggatttttcttttgatg cactatagtgactttccctatctcttctgattagtattagttttaaggct gcactagattgcttcttaggtccatttgtttggaatatctttttccattc ttttactttttctattcttgattttaagacatgtttcttggatgcagcag aaggatggatcctgtttttcacacccattctgttaatctgtgtcttttta ttggg
quality values	Open. Hide. 58 38 27 39 58 39 22 54 62 62 62 62 54 38 47 62 62 62 47 47 62 62 47 41 47 54 62 62 62 62 62 62 59 46 29 35 59 59 59 59 62 59 62 59 54 62 59 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 54 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 46 46 46 51 51 51 51 46 36 46 43 49 39 34 34 31 24 31 13 19 34 18 41 22 24 24 24 24 24 31 24 18 24 30 39 40 40 43 30 43 43 43 49 34 34 41 34 40 51 30 34 30 34 31 49 43 49 30 39 27 43 34 18 39 34 34 28 18 28 28 30 30 24 30 30 34 34 34 43 51 39 30 22 31 30 34 30 34 23 49 30 41 39 31 34 30 23 34 30 43 34 13 24 27 16 26 30 24 34 36 34 31 24 27 30 32 49 34 30 24 30 23 24 24 23 24 36 30 24 34 24 34 39 30 34 43 37 38 43 49 40 30 34 18 23 23 23 34 28 46 43 30 40 30 30 18 49 40 19 46 24 49 30 43 30 34 30 30 40 30 34 30 27 34 24 34 43 41 30 39 39 35 34 35 34 36 46 34 36 34 30 27 23 40 51 56 36 39 39 49 26 46 33 50 46 39 34 34 34 34 34 30 30 30 34 30 24 46 34 30 34 43 43 24 41 39 28 27 34 31 14 10 30 40 34 49 34 24 36 22 34 41 41 40 43 39 30 34 34 39 43 43 34 11 35 40 34 34 30 24 24 24 24 27 23 18 23 23 28 23 23 27 28 17 23 19 18 18 24 23 8 20 25 32 22 39 23 18 18 30 30 34 34 43 39 24 30 30 32 43 30 34 24 30 39 24 30 43 39 30 30 32 23 34 30 50 28 25 36 39 31 18 30 24 41 34 51 43 28 24 30 39 31 34 30 22 20 18 20 22 20 17 24 20 13 16 32 39 22 32 32 20 11 10 19 25 28 28 28 24 20 24 24 13 16 15 16 20 21 32 24 22 14 32 31 31 38 38 42 27 31 23 42 42 24 22 27 39 51 51 42 26 27 24 31 27 39 24 38 31 33 39 50 47 37 32 46 30 23 30 32 35 27 15 14 20 14 15 17 27 33 42 42 42 31 33 42 42 42 31 39 37 24 22 23 33 42 23 33 46 27 38 17 23 18 24 21 19 27 24 27 28 30 23 14 17 24 28 31 18 24 10 24 30 24 31 38 38 10 17 27 28 31 31 30 22 17 11 22 25 17 27 19 11 13 26 29 26 21 15 21 25 15 15 28 20 42 24 42 23 42 27 23 18 13 22 22 13 35 25 34 39 18 17 13 16 19 13 10 15 10 10 10 14 46 27 27 27 29 33 32 26 28 18 32 25 19 33 15 17 17 37 21 30 27 32 31 25 12 10 19 9 18 9 18 14 17 18 18 27 27 21 30 22 25 33 34 41 34 19 25 10 41 34 25 25 19 18 30 15 27 20 21 21 27 42 31 13 21 10 11 14 39 19 18 39 17 37 46 46 41 46 40 26 27 24 12 23 14 24 20 10 9 32 18 23 29 13 16 29 24 28 29 32 9 12 9 28 19 6 6 16 11 13 21 32 31 32 11 27 11 14 15 6 9 8 16 27 38 21 34 29 18 9 9 11 28 31 24 24 19 24 7 28 24 12 11 15 18 14 25 13 30 24 18 8 24 19 37 18 21 21 28 23 10 35 32 30 22 15 21 15 8 9 24 17 33 31 24 40 23 14 12 11 9 8 8 13 13 13 13 13 12 19 9 27 9 19 14 13 16 23 18 18 10	Open. Hide. 49 62 62 62 62 59 56 43 42 33 48 32 43 54 59 59 62 62 59 62 59 62 62 62 62 62 54 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 54 54 59 59 62 62 62 59 62 62 62 59 62 62 62 54 54 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 49 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_46287364_46288255
seq2: B6Ng01-310B15.b_50_947 (reverse)

seq1  ----CACACACACACACA-TACATACACACCAGTGGGTTGTTATCC--AA  43
          || ||| ||||||| ||||||||||||| |||| ||| ||||  ||
seq2  CACACAGACAGACACACATTACATACACACCAATGGG-TGTAATCCCAAA  49

seq1  AGCATGAGGCTATCTGAGCGCTGAGAGGCTGCCATAGGTCATCTGTAAGT  93
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAGGCTATCTGAGCGCTGAGAGGCTGCCATAGGTCATCTGTAAGT  99

seq1  GGACAAAGCCAGGGTTTGGGGCAGGGGGTTATTGTAGGAGGGTTGCTGTC  143
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  GGACAAAGCCAGGG-TTGGGGCAGGGGGTTATTGTAGAAGGGTTGCTGTC  148

seq1  TCCCCCTGAGACTTCAGGGGTCTTGGGACTGGTGACACCTGGGGTAGAGG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTGAGACTTCAGGGGTCTTGGGACTGGTGACACCTGGGGTAGAGG  198

seq1  AGCATAGTAACAAGGTC-AAGGACTGCCTCTGCCCCAGCAGATACAGAGG  242
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCATAGTAACAAGGTCAAAGGACTGCCTCTGCCCCAGCAGATACAGAGG  248

seq1  GACAGTTCCTCACTTCCCATCCAGAGAGTTCCCTCCCCACTTCAAGGCCA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTCCTCACTTCCCATCCAGAGAGTTCCCTCCCCACTTCAAGGCCA  298

seq1  GCCCAAGGTAATAGTTTTTGAAACATTTCCTTTGAAACATTTGCATGGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGGTAATAGTTTTTGAAACATTTCCTTTGAAACATTTGCATGGAG  348

seq1  TTATTAAATAAATAAGGGTTGACTTGAAGCAGTGTTTGTTGGGAAATGTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATAAATAAGGGTTGACTTGAAGCAGTGTTTGTTGGGAAATGTG  398

seq1  ATATGAAAATTCATTTAATATGCAAGAATGTGGAAGAGTAAGCGTATGGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAATTCATTTAATATGCAAGAATGTGGAAGAGTAAGCGTATGGT  448

seq1  GACATCCTGATTGCAGATAGTATCTGATAACTCCATACGAACACACTTCA  492
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GACATCCTGATTGCAGATAGTATTTGATAACTCCATACGAACACACTTCA  498

seq1  GTCACCATATCTGTAGCGTTGGTCCTCTGCTCCAGAAGCACAAAGAGGTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATATCTGTAGCGTTGGTCCTCTGCTCCAGAAGCACAAAGAGGTG  548

seq1  ACTGTATGCGAGACCTCTCTTCTGGGCCAGATTAGAATTAATTAATTGGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGCGAGACCTCTCTTCTGGGCCAGATTAGAATTAATTAATTGGG  598

seq1  AATATTGTGACATTACTTTGGTAATTAAGAAGCATCCTCGGCAATGAGAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTGACATTACTTTGGTAATTAAGAAGCATCCTCGGCAATGAGAT  648

seq1  GAAGTGTTTACTATTGTCTCCAATGAGGCAGGAAAAGATGAGACGTGGCG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTTACTATTGTCTCCAATGAGGCAGGAAAAGATGAGACGTGGCG  698

seq1  AAATCACAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  742
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACACCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  748

seq1  AGAGAGATCTGGAGGGGGTGGCTCTATTCTTTCTGTCTTCAGCTTTTCTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATCTGGAGGGGGTGGCTCTATTCTTTCTGTCTTCAGCTTTTCTG  798

seq1  ACTTGCTTATAGTGTGTGGGGCCCCTGATAAGAGGCAGGGTCTCAGGGCC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTTATAGTGTGTGGGGCCCCTGATAAGAGGCAGGGTCTCAGGGCC  848

seq1  AGGCCACAGGGAGACCTTCCAGCACCTCCCTGAGGGTCAAGGGTGAATTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAGGGAGACCTTCCAGCACCTCCCTGAGGGTCAAGGGTGAATTC  898

seq1: chr13_85243632_85243776
seq2: B6Ng01-310B15.g_387_526 (reverse)

seq1  CCCAATAAAAAGACACAGATTAATAGAAAGGATGTG-GAAATAGGATTAA  49
      ||||||||||||||||||||||| |||| || ||||  ||| |||||  |
seq2  CCCAATAAAAAGACACAGATTAACAGAATGGGTGTGAAAAACAGGATCCA  50

seq1  TAGTT-TACTGCACACAA-AAACACATATCAACATCAAAAATAGACATTA  97
      |  || | |||||  ||| |||||  | | || ||||| ||||||     
seq2  TCCTTCTGCTGCATCCAAGAAACATGTCTTAAAATCAAGAATAGA-----  95

seq1  CCTCAGAGTAAAGGGTTGGAAAAAGATATTCCAAGCAAATGGATCTAA  145
          | |||||| |  |||||||||||||||||| |||||||| ||||
seq2  ---AAAAGTAAAAGAATGGAAAAAGATATTCCAAACAAATGGACCTAA  140

BAC Information

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BAC

BAC End Information

Alignment Information