BAC Information

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BAC

Clone NameB6Ng01-315F01
Chromosome13 (Build37)
Map Location 63,535,466 - 63,536,572
singlet/doubletsinglet
Overlap genenone
Upstream gene8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366, LOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc
Downstream genePtch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik, EG665575, Hsd17b3, Slc35d2, Zfp367, Habp4, Cdc14b, 1110018J18Rik, Ctsl, Ccrk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315F01.bB6Ng01-315F01.g
ACCGA105998GA105999
length2671,097
definitionB6Ng01-315F01.b B6Ng01-315F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agggaggtctacattctgtttacgcctttgagacgcagtgtgcacttgct
acacttctgccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgagagagagtgagagagagaaaaagttacagattactacat
gggatgagaagtgagatatcagttaactttttttgtataattttatattt
tttttttctgtttaaaatgacacattcgtttttggagtctttctctcaag
atttttgttttctgtgt
gaattctttgggggctggggatgtagtttagtggtacaacacttgtctag
tatgaacggcagcttggtttaatccccagcaccctgatttattctttatt
ggctgtgtacaaactgggagcattgctttacttacaggtactggaattag
agatcaagtgagacagtgaccatagagtgcctggggaagttccccaaaca
gagatgctcactaaacgctgcagaacagagatgctcattaaacactgatt
tttttgaggccttactgtgtttcccaggcaacctttatgcttcaggctca
tgagtagtgggatcatagccactatgactgttttacatgttggtttctca
tgcttgcgtgttatggcttgactatgaaatatctcacagaggctcaagtg
ttgaatgtttgggtcacagctggcagttctactttgaaaggcagtcaaaa
ctttgagggaggtgaagcctggctggaagcaggtgtgtagaaggtgtttt
tgacagttgtgcctggtcagggcagggtccctttttccctctttgcttcc
tgtgtcccagtgtgtgagttcaccacaccaagcagccgaggagtcagtgg
gtggtgacacacctttcccttaagcagtcacgttgggcatttcatcactc
aaaacataaggaacatgttttgttcctatgcatctttaagaattaaagta
cagtttaacacacacacacaggtgcacacacacaaactgaagactagaac
cttcattaagcatagaaatagacaagatgcagttaagttcgttttgggaa
aacattcagtgatttaagggtcaatctgaaactgacacaggaataggatg
gaattcactttttttttctgacttaatggttgccaggattaatcaagtca
caatgtgaataatttcttccttttcaactggaatttttaagtgcttattc
ttagaaattctttaatattaattcatgctaagtgaatcattataaatact
tatgagaaaactattttagccatgtgctcatttgaactgtacttattact
ttctgcaggccattaaaacgtgcctaattagtacaaccacccaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_63535466_63536572
seq2: B6Ng01-315F01.g_65_1161 (reverse)

seq1  ATCCTGGTGTGTTGTAACTAATTTAGCACGTTTTTATTGCCTGCAGAAAG  50
      |||||||   ||||| |||||||  ||||||||| || ||||||||||||
seq2  ATCCTGGGTGGTTGT-ACTAATTAGGCACGTTTTAATGGCCTGCAGAAAG  49

seq1  TAATAAGTTACAGTTTCAAATGAGCACATGGCTTAAAAATAGTTTTCCTC  100
      ||||||| ||||| |||||||||||||||||||  ||||||||||| |||
seq2  TAATAAG-TACAG-TTCAAATGAGCACATGGCT--AAAATAGTTTT-CTC  94

seq1  ATAAGTATTTAATAATGATTCACTTAGCATGAAATTAATATTAAAGAATT  150
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  ATAAGTATTT-ATAATGATTCACTTAGCATG-AATTAATATTAAAGAATT  142

seq1  TCTAAGAATAAGCACTTAAAAATTCCAGTTGAAAAAGGAAGAAATTATTC  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTAAGAATAAGCACTTAAAAATTCCAGTTG-AAAAGGAAGAAATTATTC  191

seq1  ACATTTGTGACTTGATTAATCCTGGCAACCATTAAGTCAGAAAAAAAAAG  250
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACA-TTGTGACTTGATTAATCCTGGCAACCATTAAGTCAGAAAAAAAAAG  240

seq1  TGAATTCCATCCTATTCCTGTGTCAGTTTCAGATTGACCCTTAAATCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCCATCCTATTCCTGTGTCAGTTTCAGATTGACCCTTAAATCACT  290

seq1  GAATGTTTTCCCAAAACGAACTTAACTGCATCTTGTCTATTTCTATGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTTCCCAAAACGAACTTAACTGCATCTTGTCTATTTCTATGCTT  340

seq1  AATGAAGGTTCTAGTCTTCAGTTTGTGTGTGTGCACCTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGTTCTAGTCTTCAGTTTGTGTGTGTGCACCTGTGTGTGTGTGT  390

seq1  TAAACTGTACTTTAATTCTTAAAGATGCATAGGAACAAAACATGTTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTACTTTAATTCTTAAAGATGCATAGGAACAAAACATGTTCCTT  440

seq1  ATGTTTTGAGTGATGAAATGCCCAACGTGACTGCTTAAGGGAAAGGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGAGTGATGAAATGCCCAACGTGACTGCTTAAGGGAAAGGTGTG  490

seq1  TCACCACCCACTGACTCCTCGGCTGCTTGGTGTGGTGAACTCACACACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACCCACTGACTCCTCGGCTGCTTGGTGTGGTGAACTCACACACTG  540

seq1  GGACACAGGAAGCAAAGAGGGAAAAAGGGACCCTGCCCTGACCAGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGGAAGCAAAGAGGGAAAAAGGGACCCTGCCCTGACCAGGCACA  590

seq1  ACTGTCAAAAACACCTTCTACACACCTGCTTCCAGCCAGGCTTCACCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAAAAACACCTTCTACACACCTGCTTCCAGCCAGGCTTCACCTCC  640

seq1  CTCAAAGTTTTGACTGCCTTTCAAAGTAGAACTGCCAGCTGTGACCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTTTTGACTGCCTTTCAAAGTAGAACTGCCAGCTGTGACCCAAA  690

seq1  CATTCAACACTTGAGCCTCTGTGAGATATTTCATAGTCAAGCCATAACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAACACTTGAGCCTCTGTGAGATATTTCATAGTCAAGCCATAACAC  740

seq1  GCAAGCATGAGAAACCAACATGTAAAACAGTCATAGTGGCTATGATCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATGAGAAACCAACATGTAAAACAGTCATAGTGGCTATGATCCCA  790

seq1  CTACTCATGAGCCTGAAGCATAAAGGTTGCCTGGGAAACACAGTAAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCATGAGCCTGAAGCATAAAGGTTGCCTGGGAAACACAGTAAGGCC  840

seq1  TCAAAAAAATCAGTGTTTAATGAGCATCTCTGTTCTGCAGCGTTTAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAATCAGTGTTTAATGAGCATCTCTGTTCTGCAGCGTTTAGTGA  890

seq1  GCATCTCTGTTTGGGGAACTTCCCCAGGCACTCTATGGTCACTGTCTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTGTTTGGGGAACTTCCCCAGGCACTCTATGGTCACTGTCTCAC  940

seq1  TTGATCTCTAATTCCAGTACCTGTAAGTAAAGCAATGCTCCCAGTTTGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTCTAATTCCAGTACCTGTAAGTAAAGCAATGCTCCCAGTTTGTA  990

seq1  CACAGCCAATAAAGAATAAATCAGGGTGCTGGGGATTAAACCAAGCTGCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCAATAAAGAATAAATCAGGGTGCTGGGGATTAAACCAAGCTGCC  1040

seq1  GTTCATACTAGACAAGTGTTGTACCACTAAACTACATCCCCAGCCCCCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATACTAGACAAGTGTTGTACCACTAAACTACATCCCCAGCCCCCAA  1090

seq1  AGAATTC  1107
      |||||||
seq2  AGAATTC  1097