BAC Information

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BAC

Clone NameB6Ng01-315G06
Chromosome13 (Build37)
Map Location 70,493,080 - 70,494,182
singlet/doubletsinglet
Overlap genenone
Upstream genePols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik
Downstream geneEG633042, BC018507, EG620473, Adamts16, 8030423J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315G06.bB6Ng01-315G06.g
ACCGA106056GA106057
length1,0251,096
definitionB6Ng01-315G06.b B6Ng01-315G06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaataccatgtggctctgggacattttttggctgggagactt
ttaataactacttctactttcttaggtattatagggttgtttagatagtt
tacctgatcttgatttaactttggtaagtggtatctagaaaatcatccta
tttattaagattttccaactttgtagagtataggcttttgaagtaagacc
taatgattctttgaatttcctcattgtctgttgttatgtctctctttttt
atttctgaatatgtttatttggatattgtctctgtgttttaattagtttg
gctaagggattatctatcttggtgtttttctcaaaaaaaaaaaaaaaaaa
aacccgctcttggtttcattgcttctttgtattgttctcttcctttctaa
ttgattaatttcagccctgagtttgattattacctaccctctacttttct
tcaggtgtgtttttaaatcactagtaggaaaactttctattttctttata
aaagcacttaatattatgaactttcctcttagcactgctttcattgtgtc
ccataaattagggtatgttgtgcctcattttcattgaattctagagtatt
tatttatttatttatttatttatttataatccctgaccctatgatcatga
tagtgctcactgagagctgttcagtttccacagctttctactgtttctgt
tgttattgaagtccagctttaattcatgattgtcagataggatacaagga
attatttattttcttttttttttttgtatatgttcaaactttgctttatg
attgacttatatttgtcaacttttgaagaagttttcataagatgctgaga
agaaggtataatcttttgtggtttgggtaaaaatatttgggtagatatct
ggcttaggcccattttgatccataaatgctagttagtttcattattttct
ctgttttagttcccatccaatgactgctcatgggtgaagagtgtgggggg
ttagagcttcccactctacgggggg
gaattctcatccctggctataaggtggtttggcttatctgggatttcccc
ttcatttgaaatttagtaatttttcaaaatttttgcattgattttttttt
ttttttactcttgcaatctatagctagggttttgttcatcttgattagag
ttttctgatatctctcaagtttggtgccttaggcaaccgcttcattttga
gccattaatccaatattttgcctcagtttctgtgtgatccagccttcaca
aggaaaacaatgtcccaccccagcttcctttttagtgcctctgagataca
tataacaaggcctcacctgagcttcacttccagagtgctctgcggttact
cttttcttatgtgcattcagggagcccagttggtaaaggagcagtcttgt
cctcggtgtgtggaaaaaccagctttactgagctgcttgaatggcagtgt
agtgtgctagccctacatggaagcaggtttaccccgaagcatcagggttg
actgctgagaagtataagaactccatggctcatgatgagaaggaaaaaca
atgaaaaacactggaccagggagagctaaggctgacagaaaactatagaa
gttgtgagcaaactacagtaagagaaagattgcagcttgcagagaaggtg
tccctgccagtgacagtgagtacgggagaaatatctggagaggacgattg
tgaaagatgactactttgttccctggtctggactcttgactttctaaaga
caataaaatgatgacacagagcacagtctaagcacagtgatgtctaagca
cagtgatggtcttacgcatttaaggagtcaagtggtgcaaaagctcctgg
gatgtggacgcccgacttgccagcaaggaagacgccacaacaggaatctt
tctgcacacgtttattggggagagcttgatagcgaaggagccccagaact
ggtgctgcttatataggcctaggagtggcgtgtctatacctgatggttgt
gctttcagtactcatttacatcccggatgggctgtgactgcgcgaaactt
tatgcacatgcccacaatgatgattatctgaacctacaggccggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_70493080_70494182
seq2: B6Ng01-315G06.g_67_1162

seq1  GAATTCTCATCCCTGGCTATAAGGTGGTTTGGCTTATCTGGGATTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCCCTGGCTATAAGGTGGTTTGGCTTATCTGGGATTTCCCC  50

seq1  TTCATTTGAAATTTAGTAATTTTTCAAAATTTTTGCATTGATTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGAAATTTAGTAATTTTTCAAAATTTTTGCATTGATTTTTTTTT  100

seq1  TTTTTTACTCTTGCAATCTATAGCTAGGGTTTTGTTCATCTTGATTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACTCTTGCAATCTATAGCTAGGGTTTTGTTCATCTTGATTAGAG  150

seq1  TTTTCTGATATCTCTCAAGTTTGGTGCCTTAGGCAACCGCTTCATTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGATATCTCTCAAGTTTGGTGCCTTAGGCAACCGCTTCATTTTGA  200

seq1  GCCATTAATCCAATATTTTGCCTCAGTTTCTGTGTGATCCAGCCTTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTAATCCAATATTTTGCCTCAGTTTCTGTGTGATCCAGCCTTCACA  250

seq1  AGGAAAACAATGTCCCACCCCAGCTTCCTTTTTAGTGCCTCTGAGATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACAATGTCCCACCCCAGCTTCCTTTTTAGTGCCTCTGAGATACA  300

seq1  TATAACAAGGCCTCACCTGAGCTTCACTTCCAGAGTGCTCTGCGGTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAAGGCCTCACCTGAGCTTCACTTCCAGAGTGCTCTGCGGTTACT  350

seq1  CTTTTCTTATGTGCATTCAGGGAGCCCAGTTGGTAAAGGAGCAGTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTATGTGCATTCAGGGAGCCCAGTTGGTAAAGGAGCAGTCTTGT  400

seq1  CCTCGGTGTGTGGAAAAACCAGCTTTACTGAGCTGCTTGAATGGCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGTGTGTGGAAAAACCAGCTTTACTGAGCTGCTTGAATGGCAGTGT  450

seq1  AGTGTGCTAGCCCTACATGGAAGCAGGTTTACCCCGAAGCATCAGGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTAGCCCTACATGGAAGCAGGTTTACCCCGAAGCATCAGGGTTG  500

seq1  ACTGCTGAGAAGTATAAGAACTCCATGGCTCATGATGAGAAGGAAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGAGAAGTATAAGAACTCCATGGCTCATGATGAGAAGGAAAAACA  550

seq1  ATGAAAAACACTGGACCAGGGAGAGCTAAGGCTGACAGAAAACTATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAACACTGGACCAGGGAGAGCTAAGGCTGACAGAAAACTATAGAA  600

seq1  GTTGTGAGCAAACTACAGTAAGAGAAAGATTGCAGCTTGCAGAGAAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGCAAACTACAGTAAGAGAAAGATTGCAGCTTGCAGAGAAGGTG  650

seq1  TCCCTGCCAGTGACAGTGAGTACGGGAGAAATATCTGGAGAGGACGATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCCAGTGACAGTGAGTACGGGAGAAATATCTGGAGAGGACGATTG  700

seq1  TGAAAGATGACTACTTTGTTCCCTGGTCTGGACTCTTGACTTTCTAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGACTACTTTGTTCCCTGGTCTGGACTCTTGACTTTCTAAAGA  750

seq1  CAATAAAATGATGACACAGAGCACAGTCTAAGCACAGTGATGTCTAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAATGATGACACAGAGCACAGTCTAAGCACAGTGATGTCTAAGCA  800

seq1  CAGTGATGGTCTTACGCATTTAAGGAGTCAAGTGGTGCAAAAGCTCCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGGTCTTACGCATTTAAGGAGTCAAGTGGTGCAAAAGCTCCTGG  850

seq1  GATGTGGACGCCCGACTTGCCAGCAAGGAAGACGCCACAACAGGAATC-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATGTGGACGCCCGACTTGCCAGCAAGGAAGACGCCACAACAGGAATCTT  900

seq1  TCTGCACACGTTTATT-GGGAGAGCTTGATAGCGAAGGGAGCCCCAGAAC  948
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  TCTGCACACGTTTATTGGGGAGAGCTTGATAGCGAA-GGAGCCCCAGAAC  949

seq1  TGGTGCTGCTTATATAGGCCTAGGAGTGGCGTGTCTATACCTGATTGGTT  998
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGTGCTGCTTATATAGGCCTAGGAGTGGCGTGTCTATACCTGA-TGGTT  998

seq1  GTGCTTTCAGTACCTCATTTACATTCCCCGGGATGGGCTGTGACTTGGCG  1048
      |||||||||||| |||||||||||   || |||||||||||||||  |||
seq2  GTGCTTTCAGTA-CTCATTTACAT---CCCGGATGGGCTGTGACT--GCG  1042

seq1  CGAAACCTTTATGCACATGCGCACATTGGTTGTTTATCTGAACTTACAGG  1098
      ||||| |||||||||||||| |||| | | || |||||||||| ||||||
seq2  CGAAA-CTTTATGCACATGCCCACAAT-GATGATTATCTGAACCTACAGG  1090

seq1  -CGGTG  1103
       |||||
seq2  CCGGTG  1096