BAC Information

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BAC

Clone NameB6Ng01-318B06
Chromosome13 (Build37)
Map Location 17,910,606 - 17,911,663
singlet/doubletsinglet
Overlap genenone
Upstream gene5033411D12Rik, 2810021B07Rik, Cdc2l5
Downstream geneRala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2, Vps41
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318B06.bB6Ng01-318B06.g
ACCGA108057GA108058
length1,0581,121
definitionB6Ng01-318B06.b B6Ng01-318B06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcgtgtgtcctttcacatgcttgcttcagcagaacatcccctc
tcctgtgtctgctccagcgaaatgttccttcaagtgttggccccagcaaa
acaccatccaaatgactttccaaagaacccttaagtttccacttcagaca
cacttcccccaacaaggccacccctatttcaaccaggctacacctcctaa
tagtgccacttctcatgggccatacgtattcaaaccatcacaacagacat
agccacctctgctatgggacactgcttagtgacttttggaaactgctcct
cactgacattgaagacaatttttcacagttgtgaattaaaaataaattct
ttggctgagcagtgggtagcacacgcctttaattccagcactcagaaggc
aaaagtaagcagacctctgtgagtttgagaccagcctggtctacagagca
aggtctaggacaaccagggctatacagagaaccatgtctcaaaaaaaaaa
aaaaaaaaaaaaaaaaaccaaaacaaacaaaagttcattgtctttgtgtc
atttagaagagaaaattctagaaaagtgatcactagctggctacagatca
cgtgcccacacccagagtgtccaagctctaacagggcagaagttggtgct
tggtgcttccagagagggaaaggagatgcacatctcacgcagacagtggc
gattccttcaaacagaaagagaggatcagacaggctttcaagccactaaa
gtacagctgtctagaacgaaagtaaactatgtgtttccatgcagagtggc
ttgcagtgtgtttatgtaggacctccagaatggcataaaagacgcgaatc
atatgtggcatttgtagacttgcccttaaggaacccacaacttttattct
gttctcaacaaatatacagcagttgggaacacactccagaattttacttt
acaaagtgatcagtttaagatgaaaagggagggctggagagatggcttca
gtgttagagcactgactgcttctttccgaaggctctgagttcaaatccaa
gcacacat

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattgtcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctgttatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaagaatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatatctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttttctagg
gcttttagatgtgttgtcaagctgctagtatgtgctgtctcccgttcttc
ttgaggcactcagagctatgagttccctcttagaatgcttcatgtgtcca
taggttggtacatgtgcttcattttcattaactctaaaaggtcttaaatt
tccttccttatcattcttgaccaagcatcattgaagaggttatcagttca
ccgtgaagtgttggcctttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17910606_17911663
seq2: B6Ng01-318B06.b_47_1104

seq1  GAATTCATCGTGTGTCCTTTCACATGCTTGCTTCAGCAGAACATCCCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCGTGTGTCCTTTCACATGCTTGCTTCAGCAGAACATCCCCTC  50

seq1  TCCTGTGTCTGCTCCAGCGAAATGTTCCTTCAAGTGTTGGCCCCAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTCTGCTCCAGCGAAATGTTCCTTCAAGTGTTGGCCCCAGCAAA  100

seq1  ACACCATCCAAATGACTTTCCAAAGAACCCTTAAGTTTCCACTTCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCCAAATGACTTTCCAAAGAACCCTTAAGTTTCCACTTCAGACA  150

seq1  CACTTCCCCCAACAAGGCCACCCCTATTTCAACCAGGCTACACCTCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCCCAACAAGGCCACCCCTATTTCAACCAGGCTACACCTCCTAA  200

seq1  TAGTGCCACTTCTCATGGGCCATACGTATTCAAACCATCACAACAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCACTTCTCATGGGCCATACGTATTCAAACCATCACAACAGACAT  250

seq1  AGCCACCTCTGCTATGGGACACTGCTTAGTGACTTTTGGAAACTGCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCTCTGCTATGGGACACTGCTTAGTGACTTTTGGAAACTGCTCCT  300

seq1  CACTGACATTGAAGACAATTTTTCACAGTTGTGAATTAAAAATAAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACATTGAAGACAATTTTTCACAGTTGTGAATTAAAAATAAATTCT  350

seq1  TTGGCTGAGCAGTGGGTAGCACACGCCTTTAATTCCAGCACTCAGAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGAGCAGTGGGTAGCACACGCCTTTAATTCCAGCACTCAGAAGGC  400

seq1  AAAAGTAAGCAGACCTCTGTGAGTTTGAGACCAGCCTGGTCTACAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAGCAGACCTCTGTGAGTTTGAGACCAGCCTGGTCTACAGAGCA  450

seq1  AGGTCTAGGACAACCAGGGCTATACAGAGAACCATGTCTCAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTAGGACAACCAGGGCTATACAGAGAACCATGTCTCAAAAAAAAAA  500

seq1  AAAAAAAAAAAAAAAAACCAAAACAAACAAAAGTTCATTGTCTTTGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAACCAAAACAAACAAAAGTTCATTGTCTTTGTGTC  550

seq1  ATTTAGAAGAGAAAATTCTAGAAAAGTGATCACTAGCTGGCTACAGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAGAGAAAATTCTAGAAAAGTGATCACTAGCTGGCTACAGATCA  600

seq1  CGTGCCCACACCCAGAGTGTCCAAGCTCTAACAGGGCAGAAGTTGGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCCCACACCCAGAGTGTCCAAGCTCTAACAGGGCAGAAGTTGGTGCT  650

seq1  TGGTGCTTCCAGAGAGGGAAAGGAGATGCACATCTCACGCAGACAGTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTTCCAGAGAGGGAAAGGAGATGCACATCTCACGCAGACAGTGGC  700

seq1  GATTCCTTCAAACAGAAAGAGAGGATCAGACAGGCTTTCAAGCCACTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTCAAACAGAAAGAGAGGATCAGACAGGCTTTCAAGCCACTAAA  750

seq1  GTACAGCTGTCTAGAACGAAAGTAAACTATGTGTTTCCATGCAGAGTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCTGTCTAGAACGAAAGTAAACTATGTGTTTCCATGCAGAGTGGC  800

seq1  TTGCAGTGTGTTTATGTAGGACCTCCAGAATGGCATAAAAGACGCGAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTGTGTTTATGTAGGACCTCCAGAATGGCATAAAAGACGCGAATC  850

seq1  ATATGTGGCATTTGTAGACTTGCCCTTAAGGAA-CCACAACTTTTATTCT  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATATGTGGCATTTGTAGACTTGCCCTTAAGGAACCCACAACTTTTATTCT  900

seq1  GTTCTCAACAAATATACAGCAGTT-GGAACACACTCCAGAAATTTTACTT  948
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  GTTCTCAACAAATATACAGCAGTTGGGAACACACTCCAG-AATTTTACTT  949

seq1  TACAAAGTGATCAGTTAAGAATGAAAAGGGAGGGCTGGAGAGATGGC-TC  997
      |||||||||||||||| |  ||||||||||||||||||||||||||| ||
seq2  TACAAAGTGATCAGTTTAAGATGAAAAGGGAGGGCTGGAGAGATGGCTTC  999

seq1  AGTGGTTAAGAGCACTGACTGCT--CTTCCGAAGGTCCTGAGTTCAAATC  1045
      ||||  | |||||||||||||||   |||||||||  |||||||||||||
seq2  AGTG--TTAGAGCACTGACTGCTTCTTTCCGAAGGCTCTGAGTTCAAATC  1047

seq1  CCAGCAACCACAT  1058
      | ||||  |||||
seq2  CAAGCA--CACAT  1058


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