BAC Information

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BAC

Clone NameB6Ng01-318D21
Chromosome13 (Build37)
Map Location 44,454,320 - 44,545,870
singlet/doubletdoublet
Overlap geneEG667157
Upstream geneSirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06, EG637868
Downstream geneJarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533, Mylip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318D21.bB6Ng01-318D21.g
ACCGA108182GA108183
length1,124728
definitionB6Ng01-318D21.b B6Ng01-318D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,454,320 - 44,455,421)(44,545,143 - 44,545,870)
sequence
gaattcaaaatatttctcctgtaagagcagccaggttatggtggctgaga
aggaaggtgaaacactaacagggttcctggtattttttacacacaggcgt
tttttggtcctttctcaggctaaaccagagtttgtttttgcttctgatgc
tcttattcctggtcacttattagcacatttaacaagcagatgactcaaac
taaaaactaaggtaagggactcagccagccccatttccatctaccctatc
tgtctcctcagccaacaagcctgtagaagaggggcgtggcattgcttaca
aaccaggcttcccgattacaagccttccaagcgagtattctgactttgag
gaatagaagattaaaaacaaaataaaacaaaacaaaacctgtcccttaaa
taatgtgaatcataagaatggtaatcagttaaaatttccagaatgataat
gtctgcaaaagccctagagaggaaccgatttttaattctgaggaatccag
agggtggtttgctcaggcagtttgttcacaacaagcctgctccaaccggg
ttgtgggggggctggaggggtacaattgtgtgcccggcggaaatggaaat
tatgcgctccggtaaccctgatccgcatcacagctaactcatttccattg
gaagttgagctgatttgccccaagttacaggtaaacagatttgcatgaag
agtcagtctaatcataggacagcagagttaggaagggtctgggtaccacc
taatgaacctccatcatgagacaaaaagggaaactgaggctcatagacaa
cccccccccaagcgtctgccacatttggtactggaactaagggcacgcat
gtccccttcttaaccgcctctgagctttagcgaaatcatcctgttatctt
tactacagacagaaaagcaatgagggagatggagatgggagagggaaaaa
aaaaaaatgaaattgaaaccagaaggaggaaaggatgagataggcctgtg
acagacagaacatttgcaggccagacggcccgcctccagccctgtcttta
ttctgtctctgtaatcctgccttcatcttcatcttccggaatccccttcc
tcctatccaggcttccccacgggc
gaattctcgtttcttttctgagttcacacctcttggtagaagggggattt
gtgaggtcaggtggtgagagacaaagaacatatcccagagaagctgggag
gagcagctcacaccaagggggcgggactctcactctgcatgcagaactga
aaaggggagaagaacacctcgtgatggcgtcccaagctgatacaggatct
cggcattgccacatggagttttctttatcttgaatatgtttccgtagttc
aggtgctgaaaacttaatcctcaaatttacacattgatgacattagaaat
gggacctttgagaggaaattagggttgggtgagatcatgaacacagggcc
cctgtggtgatgttagtgacttttataagaagagggagacctgagggagg
cagcacatctctctttccatgggatgctctctacagtgttaggatacagc
agccaggccctttccagatgctggtaccaagcttttgggcttcctggaca
ccagaatcatgatctaaataaacctctactctctacaaattactttctta
tagcacagaaaggtaattgaaatattattttagtgggagatacagacaaa
agcttacaggtggcattggagagtttcctgggctggtcaccaagggaaag
gcaaagtactcctgagaaggaaaaattggagggtaatggttggacttgga
actggggtgggggctagggagtgggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44454320_44455421
seq2: B6Ng01-318D21.b_44_1167

seq1  GAATTCAAAATATTTCTCCTGTAAGAGCAGCCAGGTTATGGTGGCTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATATTTCTCCTGTAAGAGCAGCCAGGTTATGGTGGCTGAGA  50

seq1  AGGAAGGTGAAACACTAACAGGGTTCCTGGTATTTTTTACACACAGGCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGTGAAACACTAACAGGGTTCCTGGTATTTTTTACACACAGGCGT  100

seq1  TTTTTGGTCCTTTCTCAGGCTAAACCAGAGTTTGTTTTTGCTTCTGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTCCTTTCTCAGGCTAAACCAGAGTTTGTTTTTGCTTCTGATGC  150

seq1  TCTTATTCCTGGTCACTTATTAGCACATTTAACAAGCAGATGACTCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCCTGGTCACTTATTAGCACATTTAACAAGCAGATGACTCAAAC  200

seq1  TAAAAACTAAGGTAAGGGACTCAGCCAGCCCCATTTCCATCTACCCTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTAAGGTAAGGGACTCAGCCAGCCCCATTTCCATCTACCCTATC  250

seq1  TGTCTCCTCAGCCAACAAGCCTGTAGAAGAGGGGCGTGGCATTGCTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTCAGCCAACAAGCCTGTAGAAGAGGGGCGTGGCATTGCTTACA  300

seq1  AACCAGGCTTCCCGATTACAAGCCTTCCAAGCGAGTATTCTGACTTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGCTTCCCGATTACAAGCCTTCCAAGCGAGTATTCTGACTTTGAG  350

seq1  GAATAGAAGATTAAAAACAAAATAAAACAAAACAAAACCTGTCCCTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAAGATTAAAAACAAAATAAAACAAAACAAAACCTGTCCCTTAAA  400

seq1  TAATGTGAATCATAAGAATGGTAATCAGTTAAAATTTCCAGAATGATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAATCATAAGAATGGTAATCAGTTAAAATTTCCAGAATGATAAT  450

seq1  GTCTGCAAAAGCCCTAGAGAGGAACCGATTTTTAATTCTGAGGAATCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAAAAGCCCTAGAGAGGAACCGATTTTTAATTCTGAGGAATCCAG  500

seq1  AGGGTGGTTTGCTCAGGCAGTTTGTTCACAACAAGCCTGCTCCAACCGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGTTTGCTCAGGCAGTTTGTTCACAACAAGCCTGCTCCAACCGGG  550

seq1  TTGTGGGGGGGCTGGAGGGGTACAATTGTGTGCCCGGCGGAAATGGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGGGGGCTGGAGGGGTACAATTGTGTGCCCGGCGGAAATGGAAAT  600

seq1  TATGCGCTCCGGTAACCCTGATCCGCATCACAGCTAACTCATTTCCATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCGCTCCGGTAACCCTGATCCGCATCACAGCTAACTCATTTCCATTG  650

seq1  GAAGTTGAGCTGATTTGCCCCAAGTTACAGGTAAACAGATTTGCATGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGAGCTGATTTGCCCCAAGTTACAGGTAAACAGATTTGCATGAAG  700

seq1  AGTCAGTCTAATCATAGGACAGCAGAGTTAGGAAGGGTCTGGGTACCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCTAATCATAGGACAGCAGAGTTAGGAAGGGTCTGGGTACCACC  750

seq1  TAATGAACCTCCATCATGAGACAAAAAGGGAAACTGAGGCTCATAGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACCTCCATCATGAGACAAAAAGGGAAACTGAGGCTCATAGACAA  800

seq1  -CCCCCCCCAAGCGTCTGCCACATTTGGTACTGGAACT-AGGGCACGCAT  848
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCCCCCCCAAGCGTCTGCCACATTTGGTACTGGAACTAAGGGCACGCAT  850

seq1  GTCCCCTTCTTAACCGCCTCTGAGCTTTAGCGAAATCATCCTGTTATC-T  897
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTCCCCTTCTTAACCGCCTCTGAGCTTTAGCGAAATCATCCTGTTATCTT  900

seq1  TACTACAGACAGAAAAGCAATGAGGGAGAT-GAGAT-GGAGAGGGAAAAA  945
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TACTACAGACAGAAAAGCAATGAGGGAGATGGAGATGGGAGAGGGAAAAA  950

seq1  AAAAAAA-GAAATTGAAA-CAGA--GAAGGAAGGATGAGATAGG-CTGTG  990
      ||||||| |||||||||| ||||  || | |||||||||||||| |||||
seq2  AAAAAAATGAAATTGAAACCAGAAGGAGGAAAGGATGAGATAGGCCTGTG  1000

seq1  ACAGACAG-ACA-TTGCAGGCGAGACGGCCCGCCT-CAG-CCTGTCTTTA  1036
      |||||||| ||| |||||||| ||||||||||||| ||| ||||||||||
seq2  ACAGACAGAACATTTGCAGGCCAGACGGCCCGCCTCCAGCCCTGTCTTTA  1050

seq1  -TCTGTCTCTGTA--TCTGCC-TCATCTCATTCTTTCCGGAAT-CCCTTC  1081
       ||||||||||||   ||||| ||||||   || ||||||||| ||||||
seq2  TTCTGTCTCTGTAATCCTGCCTTCATCTTCATC-TTCCGGAATCCCCTTC  1099

seq1  --TCTTTCCAGGCT--CCCACGGGC  1102
         || ||||||||  |||||||||
seq2  CTCCTATCCAGGCTTCCCCACGGGC  1124

seq1: chr13_44545143_44545870
seq2: B6Ng01-318D21.g_66_793 (reverse)

seq1  ACCCCCACTCCCTAGCCCCCACCCCAGTTCCAAGTCCAACCATTACCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACTCCCTAGCCCCCACCCCAGTTCCAAGTCCAACCATTACCCTC  50

seq1  CAATTTTTCCTTCTCAGGAGTACTTTGCCTTTCCCTTGGTGACCAGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTCCTTCTCAGGAGTACTTTGCCTTTCCCTTGGTGACCAGCCCA  100

seq1  GGAAACTCTCCAATGCCACCTGTAAGCTTTTGTCTGTATCTCCCACTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCTCCAATGCCACCTGTAAGCTTTTGTCTGTATCTCCCACTAAA  150

seq1  ATAATATTTCAATTACCTTTCTGTGCTATAAGAAAGTAATTTGTAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTCAATTACCTTTCTGTGCTATAAGAAAGTAATTTGTAGAGAG  200

seq1  TAGAGGTTTATTTAGATCATGATTCTGGTGTCCAGGAAGCCCAAAAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTTTATTTAGATCATGATTCTGGTGTCCAGGAAGCCCAAAAGCTT  250

seq1  GGTACCAGCATCTGGAAAGGGCCTGGCTGCTGTATCCTAACACTGTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGCATCTGGAAAGGGCCTGGCTGCTGTATCCTAACACTGTAGAG  300

seq1  AGCATCCCATGGAAAGAGAGATGTGCTGCCTCCCTCAGGTCTCCCTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCCATGGAAAGAGAGATGTGCTGCCTCCCTCAGGTCTCCCTCTTC  350

seq1  TTATAAAAGTCACTAACATCACCACAGGGGCCCTGTGTTCATGATCTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGTCACTAACATCACCACAGGGGCCCTGTGTTCATGATCTCAC  400

seq1  CCAACCCTAATTTCCTCTCAAAGGTCCCATTTCTAATGTCATCAATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTAATTTCCTCTCAAAGGTCCCATTTCTAATGTCATCAATGTGT  450

seq1  AAATTTGAGGATTAAGTTTTCAGCACCTGAACTACGGAAACATATTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGAGGATTAAGTTTTCAGCACCTGAACTACGGAAACATATTCAAG  500

seq1  ATAAAGAAAACTCCATGTGGCAATGCCGAGATCCTGTATCAGCTTGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAAACTCCATGTGGCAATGCCGAGATCCTGTATCAGCTTGGGAC  550

seq1  GCCATCACGAGGTGTTCTTCTCCCCTTTTCAGTTCTGCATGCAGAGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCACGAGGTGTTCTTCTCCCCTTTTCAGTTCTGCATGCAGAGTGAG  600

seq1  AGTCCCGCCCCCTTGGTGTGAGCTGCTCCTCCCAGCTTCTCTGGGATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCGCCCCCTTGGTGTGAGCTGCTCCTCCCAGCTTCTCTGGGATATG  650

seq1  TTCTTTGTCTCTCACCACCTGACCTCACAAATCCCCCTTCTACCAAGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTCTCTCACCACCTGACCTCACAAATCCCCCTTCTACCAAGAGG  700

seq1  TGTGAACTCAGAAAAGAAACGAGAATTC  728
      ||||||||||||||||||||||||||||
seq2  TGTGAACTCAGAAAAGAAACGAGAATTC  728