BAC Information

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BAC

Clone NameB6Ng01-318O10
Chromosome13 (Build37)
Map Location 37,758,663 - 37,928,802
singlet/doubletdoublet
Overlap geneLOC100042802, LOC100041624, Rreb1
Upstream geneNrn1, F13a1, Ly86, LOC100042794, LOC100042800
Downstream geneSsr1, Cage1, Riok1, Dsp, 6530403A03Rik, Bmp6, Txndc5, Muted, Eef1e1, LOC621102
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318O10.bB6Ng01-318O10.g
ACCGA108673GA108674
length751507
definitionB6Ng01-318O10.b B6Ng01-318O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,928,056 - 37,928,802)(37,758,663 - 37,759,175)
sequence
gaattcaggggtggtactccatatctgagattctagcactcagaattaag
caggagaagctcccagccaggactatacagtaaaatcctgctttgtgcct
caaaaaatagaattacatagtaacatgcatataagtatggaatgcatgca
tgcactcacgtttcagggtaaggctgtaactcagaggcagagggtacttc
cctggcatgtgcagcgcctgaaattcattacccagcactacaaaggtaag
ttatactagatttcaaacttcaagtgcttagccaaatacacagatttaat
taaccactctatggggcccatttggagatgttcaccaaacacttctataa
aaaccattctccaaacaactaaatgtcttataaaagagaaaatggctctt
caaaaattttactctcattactggagagacggcttggcaggtagagccct
ggctgctcttccagaggatccaggttcaactcctagcacccacatggtgg
ctcgcaactgcctgtagctccagttccaggggatctgacaccctcatgca
gacaaaaacaccaatgtatactaaataagaattaatatattttttaaaaa
aacaggaaagttccataacagtccagaacagtccgagctgcaaaagggaa
accctgtcccaaaaaacaaaacgtttactttctgactgcatctagcagat
ctgtttgaactacggcttcataactttttgtacatgacatgatggacaga
g
tttgccggctggagttccccagcaacagtcctgaccgtgtggattaatct
gtggcacaacgaagaagtgtgtggcacctgtggcctccagcagcgggatg
cattccagctgtaagggcagagccctgcgtaggaggaagcaccggcgaga
agggttccacgagccctcagaaggggcacattctgtctcctctggacaag
ggttaaccacattctgaaccaagctcccgtctgctacaagtcagcctttc
tgcctttcgctttggtaaaagtgaccttcctccaaggtttagtaagactt
tgactagaaccagccgtctgtggttctaaactactgcgcagaactggacg
tcccaaccacgaacagttctagagctgtctgtgcagtcctgctctctggg
aatatgaaggattcttgcacctcgctcttttccctcgctcttcctctttc
cttccactctgttcctatctacatctctcctctcctctcctctcctctcc
actccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37928056_37928802
seq2: B6Ng01-318O10.b_47_797 (reverse)

seq1  CTCTGTCC-TCCTGTCATGTAC-ATAAGTCATGAAGCCGTAGTTCAAACA  48
      |||||||| || |||||||||| | |||| ||||||||||||||||||||
seq2  CTCTGTCCATCATGTCATGTACAAAAAGTTATGAAGCCGTAGTTCAAACA  50

seq1  GATCTGCTAGATGCAGTCAGAAAGTAAACGTTTTGTTTTTTGGGACAGGG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTAGATGCAGTCAGAAAGTAAACGTTTTGTTTTTTGGGACAGGG  100

seq1  TTTCCCTTCTGCAGCTCGGACTGTTCTGGACTGTTCTGG-ACTTACCTGT  147
      |||||||| |||||||||||||||||||||||||| ||| |||| |||||
seq2  TTTCCCTTTTGCAGCTCGGACTGTTCTGGACTGTTATGGAACTTTCCTGT  150

seq1  TTTTTTAAAAAAT-TATTAATTCTTATTTAGTATACATTGGTGTTTTTGT  196
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAAAATATATTAATTCTTATTTAGTATACATTGGTGTTTTTGT  200

seq1  CTGCATGAGGGTGTCAGATCCCCTGGAACTGGAGCTACAGGCAGTTGCGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGAGGGTGTCAGATCCCCTGGAACTGGAGCTACAGGCAGTTGCGA  250

seq1  GCCACCATGTGGGTGCTAGGAGTTGAACCTGGATCCTCTGGAAGAGCAGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGTGGGTGCTAGGAGTTGAACCTGGATCCTCTGGAAGAGCAGC  300

seq1  CAGGGCTCTACCTGCCAAGCCGTCTCTCCAGTAATGAGAGTAAAATTTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCTACCTGCCAAGCCGTCTCTCCAGTAATGAGAGTAAAATTTTT  350

seq1  GAAGAGCCATTTTCTCTTTTATAAGACATTTAGTTGTTTGGAGAATGGTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCCATTTTCTCTTTTATAAGACATTTAGTTGTTTGGAGAATGGTT  400

seq1  TTTATAGAAGTGTTTGGTGAACATCTCCAAATGGGCCCCATAGAGTGGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAAGTGTTTGGTGAACATCTCCAAATGGGCCCCATAGAGTGGTT  450

seq1  AATTAAATCTGTGTATTTGGCTAAGCACTTGAAGTTTGAAATCTAGTATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATCTGTGTATTTGGCTAAGCACTTGAAGTTTGAAATCTAGTATA  500

seq1  ACTTACCTTTGTAGTGCTGGGTAATGAATTTCAGGCGCTGCACATGCCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCTTTGTAGTGCTGGGTAATGAATTTCAGGCGCTGCACATGCCAG  550

seq1  GGAAGTACCCTCTGCCTCTGAGTTACAGCCTTACCCTGAAACGTGAGTGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTACCCTCTGCCTCTGAGTTACAGCCTTACCCTGAAACGTGAGTGC  600

seq1  ATGCATGCATTCCATACTTATATGCATGTTACTATGTAATTCTATTTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCATTCCATACTTATATGCATGTTACTATGTAATTCTATTTTTT  650

seq1  GAGGCACAAAGCAGGATTTTACTGTATAGTCCTGGCTGGGAGCTTCTCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACAAAGCAGGATTTTACTGTATAGTCCTGGCTGGGAGCTTCTCCT  700

seq1  GCTTAATTCTGAGTGCTAGAATCTCAGATATGGAGTACCACCCCTGAATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTCTGAGTGCTAGAATCTCAGATATGGAGTACCACCCCTGAATT  750

seq1  C  747
      |
seq2  C  751

seq1: chr13_37758663_37759175
seq2: B6Ng01-318O10.g_67_579

seq1  GAATTCTTTGCCGGCTGGAGTTCCCCAGCAACAGTCCTGACCGTGTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCCGGCTGGAGTTCCCCAGCAACAGTCCTGACCGTGTGGAT  50

seq1  TAATCTGTGGCACAACGAAGAAGTGTGTGGCACCTGTGGCCTCCAGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGTGGCACAACGAAGAAGTGTGTGGCACCTGTGGCCTCCAGCAGC  100

seq1  GGGATGCATTCCAGCTGTAAGGGCAGAGCCCTGCGTAGGAGGAAGCACCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCATTCCAGCTGTAAGGGCAGAGCCCTGCGTAGGAGGAAGCACCG  150

seq1  GCGAGAAGGGTTCCACGAGCCCTCAGAAGGGGCACATTCTGTCTCCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAAGGGTTCCACGAGCCCTCAGAAGGGGCACATTCTGTCTCCTCTG  200

seq1  GACAAGGGTTAACCACATTCTGAACCAAGCTCCCGTCTGCTACAAGTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGTTAACCACATTCTGAACCAAGCTCCCGTCTGCTACAAGTCAG  250

seq1  CCTTTCTGCCTTTCGCTTTGGTAAAAGTGACCTTCCTCCAAGGTTTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGCCTTTCGCTTTGGTAAAAGTGACCTTCCTCCAAGGTTTAGTA  300

seq1  AGACTTTGACTAGAACCAGCCGTCTGTGGTTCTAAACTACTGCGCAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGACTAGAACCAGCCGTCTGTGGTTCTAAACTACTGCGCAGAAC  350

seq1  TGGACGTCCCAACCACGAACAGTTCTAGAGCTGTCTGTGCAGTCCTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACGTCCCAACCACGAACAGTTCTAGAGCTGTCTGTGCAGTCCTGCTC  400

seq1  TCTGGGAATATGAAGGATTCTTGCACCTCGCTCTTTTCCCTCGCTCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAATATGAAGGATTCTTGCACCTCGCTCTTTTCCCTCGCTCTTCC  450

seq1  TCTTTCCTTCCACTCTGTTCCTATCTACATCTCTCCTCTCCTCTCCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTCCACTCTGTTCCTATCTACATCTCTCCTCTCCTCTCCTCTC  500

seq1  CTCTCCTCTCCTC  513
      |||||| |||| |
seq2  CTCTCCACTCCAC  513