BAC Information

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BAC

Clone NameB6Ng01-322O06
Chromosome16 (Build37)13 (Build37)
Map Location 69,852,489 - 69,853,1343,045,700 - 3,046,740
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneSpeer2, EG664930, Gbe1, D16Ertd519e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322O06.bB6Ng01-322O06.g
ACCGA111613GA111614
length8941,043
definitionB6Ng01-322O06.b B6Ng01-322O06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,852,489 - 69,853,134)(3,045,700 - 3,046,740)
sequence
gaattctgtattaaaaccatgtggtcctgggttttttttgggggggcagg
ggtggtgagtgaataacttttgatgacttttttcttttctcttagggaat
ataaggttatttagttactttattagatctagaataaactatggtaattg
atatatgtctagaatatcacccatgtcatattgtttttttatttcaatat
tttggagtttaggcttttgaagtcagacctaattattcttttaagttcct
cagtgttcattgttatattttcctttttcatttcagattttggtaatttg
ggcattgtctctctgccttttctttcatttgggtaaggggttgtctatct
tgttgattttctcatagagccatctctgggattccgtgagtcttttaatt
atcttctttgtttctcgttgattgatttaatttctgttttatttcctgcc
atccaatcctaccaaactctcagtgggatgaggctttgcctcaccttgga
aactgtagcatgtaataaacaaagctctttgttgttctgtgtggtgggtg
atacacatgacagcctcactaaaaaccctgcatagccaagtttaagggtg
tattgaattagcccactctgtcagtgttacctgcaaggtgccatgagaca
ttaaaccaaaagtcagtatacacctccactatattttttcattttggtct
ttccagtcatattggaaaaaatttataatgggtttcatgaatatactaac
acattcacacacacactcaaacacagagacagagacagagagacagagtg
acagacagatagaaagaatttgtgggatatatgttccttctactatttgt
tccctaagaaggaactcgtgtttctaggttttgttaccaaggat

gaattctaaactagcactgtggttgttggctggaggcaagagatatggca
gctcccaagcccttctggaagcagcctactaacaggaggctcccttggag
actagtctcacatagctccatcttgccagagtgacggttcctccaaactt
acaccttaggaatccttatgtgagatgtgctttgtgcatttgaattactt
tagaaattggagccctgcgatgtaccactcaggaaaataaatagtcatat
taactcctagaaaatgccacctctttggtttgaattggttccgaaagcat
tttctttctggtttgtacgcaccacattgttcaggctcttctcatcactg
accagctggcttgtcagtgaatagagctgtgggcccttcgccatgtttca
tgtggggtcttggctgggtggcaaacaggcagcctgtagccagtgtcagc
aattcaggaggaattggcacagcagtgtccccattaatttctgtttgtca
catgctgtcatgcaagttacaccagagaggaaatgaccgttaaaaaaaaa
aaaaggtacccttgtggcactgggtcccctccagatgtccccgaggttaa
acaaatggatacaattagttctacactgacagctgcagggaagggaaagc
ctagaccaagccccacagcaatgtgtctgtcctgttagtgtggagtgtca
gctgtcaacatctgccatattttaacccttcaaaggaaccagtaaattaa
gggaagctattatctcacactctgttgatcattattgatcataatgcctt
agaaaatcaccacagtgctgccccctcagcagcaggttttgtctttgggg
ggtggttttatgttattgctgggagctgaggaagtggtgaagcacaaggg
tgagggctctttaatcattgatatttactgccacatggaaggacactcag
gggtgtggtgcacacaccctttaatctagtacttggggaggctagagcag
ctggattttcatgatttgagtcagccttgtcctaacagagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69852489_69853134
seq2: B6Ng01-322O06.b_365_942

seq1  CTTTCCTTTCATTTGGGTAAGGGGTTGTCTATCTTGTTGATTTTCTCAAA  50
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTTTTCTTTCATTTGGGTAAGGGGTTGTCTATCTTGTTGATTTTCTCATA  50

seq1  GAGCCAGCTCTTGGATTCCTTGAGTCTTTTAATTATCCTCTTTGTTTCTT  100
      |||||| |||| ||||||| ||||||||||||||||| ||||||||||| 
seq2  GAGCCATCTCTGGGATTCCGTGAGTCTTTTAATTATCTTCTTTGTTTCTC  100

seq1  ATTGATTGATTTAATTTCTGCTTTATTTCCTGCCATCCAATCCTACCAAA  150
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTTGATTGATTTAATTTCTGTTTTATTTCCTGCCATCCAATCCTACCAAA  150

seq1  CTCTCAATGGGATGAGGCTTTGCCTCACCTTGGGAACTGCAGCATGTAAT  200
      |||||| |||||||||||||||||||||||||| ||||| ||||||||||
seq2  CTCTCAGTGGGATGAGGCTTTGCCTCACCTTGGAAACTGTAGCATGTAAT  200

seq1  AAACAAAGCTC-TTGCTGTTCTTTGTGGTGGGTGATGCACATGACAGCCT  249
      ||||||||||| ||| |||||| ||||||||||||| |||||||||||||
seq2  AAACAAAGCTCTTTGTTGTTCTGTGTGGTGGGTGATACACATGACAGCCT  250

seq1  CACTAAAAACCCTGCAAAGCCAGATTTAAGGGTGTATTGAATTAGCCCAC  299
      |||||||||||||||| |||||  ||||||||||||||||||||||||||
seq2  CACTAAAAACCCTGCATAGCCAAGTTTAAGGGTGTATTGAATTAGCCCAC  300

seq1  TCTGTCAGTGTTACCTGCAAGGTGCCATGAGACATTAA--CCAAAGTCAG  347
      ||||||||||||||||||||||||||||||||||||||  | ||||||||
seq2  TCTGTCAGTGTTACCTGCAAGGTGCCATGAGACATTAAACCAAAAGTCAG  350

seq1  TATACACCCCCACTATA-TTTTTCACTTCGGTCTTTCCAGTCATATTGGA  396
      |||||||| |||||||| ||||||| || |||||||||||||||||||||
seq2  TATACACCTCCACTATATTTTTTCATTTTGGTCTTTCCAGTCATATTGGA  400

seq1  AAAAA-TTATAATAGG-TTCATGAATGCACAGAGAGAGAGAGAGAGACAG  444
      ||||| ||||||| || |||||||||                  | ||  
seq2  AAAAATTTATAATGGGTTTCATGAAT------------------ATACTA  432

seq1  AGACAGAGACAGAGACAGAGAGACAAAGAGAGATACAGAGAGAGACAGAG  494
      | |||   ||| | ||                                  
seq2  ACACATTCACACACAC----------------------------------  448

seq1  AGAGACAGAGACAGAGACAGAGACAGAGGGACAGAGTGACAGAGTGACAG  544
        |  || | |||||||||||||||||| ||||||||||||         
seq2  --ACTCAAACACAGAGACAGAGACAGAGAGACAGAGTGACA---------  487

seq1  AGTGACAGAGTGACAGACAGATAGAAATTGTGAGAAATATGTTCCTTCTA  594
                 |||||| ||| |||| ||||| || ||||||||||||||
seq2  -----------GACAGATAGAAAGAATTTGTGGGATATATGTTCCTTCTA  526

seq1  CTATTTTGTTTGCTAAGAAGGAACACATGTTTCTAGG-TTTGGTACCAAG  643
      ||| ||||||  |||||||||||| | |||||||||| |||| |||||||
seq2  CTA-TTTGTTCCCTAAGAAGGAACTCGTGTTTCTAGGTTTTGTTACCAAG  575

seq1  GAT  646
      |||
seq2  GAT  578


seq1: chr13_3045700_3046740
seq2: B6Ng01-322O06.g_68_1110

seq1  GAATTCTAAACTAGCACTGTGGTTGTTGGCTGGAGGCAAGAGATATGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACTAGCACTGTGGTTGTTGGCTGGAGGCAAGAGATATGGCA  50

seq1  GCTCCCAAGCCCTTCTGGAAGCAGCCTACTAACAGGAGGCTCCCTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAAGCCCTTCTGGAAGCAGCCTACTAACAGGAGGCTCCCTTGGAG  100

seq1  ACTAGTCTCACATAGCTCCATCTTGCCAGAGTGACGGTTCCTCCAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTCACATAGCTCCATCTTGCCAGAGTGACGGTTCCTCCAAACTT  150

seq1  ACACCTTAGGAATCCTTATGTGAGATGTGCTTTGTGCATTTGAATTACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTAGGAATCCTTATGTGAGATGTGCTTTGTGCATTTGAATTACTT  200

seq1  TAGAAATTGGAGCCCTGCGATGTACCACTCAGGAAAATAAATAGTCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTGGAGCCCTGCGATGTACCACTCAGGAAAATAAATAGTCATAT  250

seq1  TAACTCCTAGAAAATGCCACCTCTTTGGTTTGAATTGGTTCCGAAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCTAGAAAATGCCACCTCTTTGGTTTGAATTGGTTCCGAAAGCAT  300

seq1  TTTCTTTCTGGTTTGTACGCACCACATTGTTCAGGCTCTTCTCATCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTGGTTTGTACGCACCACATTGTTCAGGCTCTTCTCATCACTG  350

seq1  ACCAGCTGGCTTGTCAGTGAATAGAGCTGTGGGCCCTTCGCCATGTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTGGCTTGTCAGTGAATAGAGCTGTGGGCCCTTCGCCATGTTTCA  400

seq1  TGTGGGGTCTTGGCTGGGTGGCAAACAGGCAGCCTGTAGCCAGTGTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTCTTGGCTGGGTGGCAAACAGGCAGCCTGTAGCCAGTGTCAGC  450

seq1  AATTCAGGAGGAATTGGCACAGCAGTGTCCCCATTAATTTCTGTTTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGAGGAATTGGCACAGCAGTGTCCCCATTAATTTCTGTTTGTCA  500

seq1  CATGCTGTCATGCAAGTTACACCAGAGAGGAAATGACCGTTAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTCATGCAAGTTACACCAGAGAGGAAATGACCGTTAAAAAAAAA  550

seq1  AAAAGGTACCCTTGTGGCACTGGGTCCCCTCCAGATGTCCCCGAGGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTACCCTTGTGGCACTGGGTCCCCTCCAGATGTCCCCGAGGTTAA  600

seq1  ACAAATGGATACAATTAGTTCTACACTGACAGCTGCAGGGAAGGGAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGATACAATTAGTTCTACACTGACAGCTGCAGGGAAGGGAAAGC  650

seq1  CTAGACCAAGCCCCACAGCAATGTGTCTGTCCTGTTAGTGTGGAGTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACCAAGCCCCACAGCAATGTGTCTGTCCTGTTAGTGTGGAGTGTCA  700

seq1  GCTGTCAACATCTGCCATATTTTAACCCTTCAAAGGAACCAGTAAATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAACATCTGCCATATTTTAACCCTTCAAAGGAACCAGTAAATTAA  750

seq1  GGGAAGCTATTATCTCACACTCTGTTGATCATTATTGATCATAATGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCTATTATCTCACACTCTGTTGATCATTATTGATCATAATGCCTT  800

seq1  AGAAAATCACCACAGTGCTGCCCCCTCAGCAGCAGGTTTTGTCTTT-GGG  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGAAAATCACCACAGTGCTGCCCCCTCAGCAGCAGGTTTTGTCTTTGGGG  850

seq1  GGTGGTTTTATGTTATTGCTGGGAGCTGAGGAAGTGGTGAAGCAC-AGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTGGTTTTATGTTATTGCTGGGAGCTGAGGAAGTGGTGAAGCACAAGGG  900

seq1  TGAGGGCTCTTTAATCATTGATAATTTACTGCCACATGGAAAGGACACTC  948
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  TGAGGGCTCTTTAATCATTGAT-ATTTACTGCCACATGG-AAGGACACTC  948

seq1  AGGGGTGTGGTGGCACACA-CCTTTAATCCTAGTACTT-GGGAGGC-AGA  995
      ||||||||||| ||||||| |||||||| ||||||||| ||||||| |||
seq2  AGGGGTGTGGT-GCACACACCCTTTAAT-CTAGTACTTGGGGAGGCTAGA  996

seq1  GGCAGGCGGA-TTTCATGATTTGAGGCCAGCCTGGTC--TACAGAGTGA  1041
       ||||  ||| ||||||||||||| | |||||| |||   |||||||||
seq2  -GCAGCTGGATTTTCATGATTTGA-GTCAGCCTTGTCCTAACAGAGTGA  1043


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