BAC Information

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BAC

Clone NameB6Ng01-324C23
Chromosome13 (Build37)
Map Location 32,005,330 - 32,154,780
singlet/doubletdoublet
Overlap geneGmds
Upstream geneExoc2, Hus1b, EG432743, LOC100041257, LOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2, Foxc1, 4930548F15Rik, LOC666212
Downstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324C23.bB6Ng01-324C23.g
ACCGA112566GA112567
length8161,154
definitionB6Ng01-324C23.b B6Ng01-324C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,153,965 - 32,154,780)(32,005,330 - 32,006,487)
sequence
gaattctcagccccttgctgcctgaaaatattgcccaatttagacagcat
aaactgtatgttccagtttgaaaatgccacaccatgtatttaagccaaat
accttccttggttgacttagaaaagtagttctaaaaataaaacactcaac
ccgaaataaacctacttgtatgtatattcaaaaataatcattctttatta
tcttttgtccacaaaggctcactggcatagaggcttgtccggaggaaaag
cctttaaccttttcagtgacttgcaagatttggagttgccctcctgtctg
tggttctgggaggttttgtctactttcttctaccagtaattcttaccaga
tcctgctctgactgttggccaacttgccagatcttgagtgatgtcttttg
tttcatcctgctgtgcatcttgcagaaaagccatcactcttgatcatttc
agtaatctgaatcctgttatttccagtcaactcagtaggacttctgagat
gatttctaagtctgctcaaaaactgtgagatgagagctttgctgaaaaca
taacaagcagttttgatagattcatctgtcttgtttacctggctttcact
ataatcacatttttgaagttttaagtagaaaccattattccttcagagac
atttatttgactttatcagcattgcccctgcaaggctgcaaagcagagtg
taccttaagcagttgttcaagtcagtttttccctagaaaacaagtcatgt
taattttcagtatttctttttcatttgtggtgtgtgtgtgtgtatgtgtg
tgtgtgtgtgtgtgag
gaattctctaatcaatcctatttttaacagtgaggaaacagaagcattga
gaaattaagtaaggaacttgcctaaggttatatatacatcttataactga
caggtactaaatggaaacactctgacttaaagcccacatttaaatacaat
actttttcccagaaataaacacactgggactgcagagatggttctgtgat
tagcaatacttatgtgattagcaatacttattcttccaaaagaatctggg
tttgactcctaggacccaggttgtagctcataagtgagtgtaattcctat
tccaggggactcttctttgccttctgaccttcatggacatcttggggtat
atgtacattcaaactaaacacccaaatataaaaagtaaaaatattaaaga
cagaaatgagagtattgtgtaataaatctgtatattactaagtacatgta
aagaaattatacttaaggcagtaatgttttattttattttattttacatg
tctatggatggaaaatggcgcattgtacatatagacaagggctttaccac
tgagctatgattcagcttaaagcaggagtctcaagtgtcacacaagtcag
gtttcaatattgccatcaccaaattctctggagctcaggggcaacgggaa
gtggacagcttaatttatcaggaagcaaaactcctcagcacccaaaggag
ccataaagactcataggtagagtataaaagatatggcgccattcagctct
aatcacaaattggagtccttgatacagaagaaaaaccttctatacccttc
atgctaatacaaaagcaaggtttaaaggtttcgtagtattgcaatctgtg
aggagaataaccattggcacacgtggatatatctgtgtcctataggttca
tcagggcctcttaggttaatatctacctttgctgaggaaaatgccttgtc
agatcagaccacagctaatttagaaaaacaacaacataaaactctatttt
atgtttgtctgctctaagaatatcatgtctaatatatgatgtgtatgtat
gtccttattacgtcttggtttaaatttttctgatgttattttttctttga
tcattcagaaacaatttccatagaaagatataagttttatggctttaaaa
taga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_32153965_32154780
seq2: B6Ng01-324C23.b_43_858 (reverse)

seq1  CACACACACACACACACACACATACACACACACACACCACAAATGAAAAA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACACACACACACACACATACACACACACACACCACAAATGAAAAA  50

seq1  GAAATACTGAAAATTAACATGACTTGTTTTCTAGGGAAAAACTGACTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACTGAAAATTAACATGACTTGTTTTCTAGGGAAAAACTGACTTGA  100

seq1  ACAACTGCTTAAGGTACACTCTGCTTTGCAGCCTTGCAGGGGCAATGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGCTTAAGGTACACTCTGCTTTGCAGCCTTGCAGGGGCAATGCTG  150

seq1  ATAAAGTCAAATAAATGTCTCTGAAGGAATAATGGTTTCTACTTAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTCAAATAAATGTCTCTGAAGGAATAATGGTTTCTACTTAAAACT  200

seq1  TCAAAAATGTGATTATAGTGAAAGCCAGGTAAACAAGACAGATGAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATGTGATTATAGTGAAAGCCAGGTAAACAAGACAGATGAATCTA  250

seq1  TCAAAACTGCTTGTTATGTTTTCAGCAAAGCTCTCATCTCACAGTTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTGCTTGTTATGTTTTCAGCAAAGCTCTCATCTCACAGTTTTTG  300

seq1  AGCAGACTTAGAAATCATCTCAGAAGTCCTACTGAGTTGACTGGAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACTTAGAAATCATCTCAGAAGTCCTACTGAGTTGACTGGAAATAA  350

seq1  CAGGATTCAGATTACTGAAATGATCAAGAGTGATGGCTTTTCTGCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCAGATTACTGAAATGATCAAGAGTGATGGCTTTTCTGCAAGAT  400

seq1  GCACAGCAGGATGAAACAAAAGACATCACTCAAGATCTGGCAAGTTGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCAGGATGAAACAAAAGACATCACTCAAGATCTGGCAAGTTGGCC  450

seq1  AACAGTCAGAGCAGGATCTGGTAAGAATTACTGGTAGAAGAAAGTAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCAGAGCAGGATCTGGTAAGAATTACTGGTAGAAGAAAGTAGACA  500

seq1  AAACCTCCCAGAACCACAGACAGGAGGGCAACTCCAAATCTTGCAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCCCAGAACCACAGACAGGAGGGCAACTCCAAATCTTGCAAGTCA  550

seq1  CTGAAAAGGTTAAAGGCTTTTCCTCCGGACAAGCCTCTATGCCAGTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGGTTAAAGGCTTTTCCTCCGGACAAGCCTCTATGCCAGTGAGC  600

seq1  CTTTGTGGACAAAAGATAATAAAGAATGATTATTTTTGAATATACATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGACAAAAGATAATAAAGAATGATTATTTTTGAATATACATACA  650

seq1  AGTAGGTTTATTTCGGGTTGAGTGTTTTATTTTTAGAACTACTTTTCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTTTATTTCGGGTTGAGTGTTTTATTTTTAGAACTACTTTTCTAA  700

seq1  GTCAACCAAGGAAGGTATTTGGCTTAAATACATGGTGTGGCATTTTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACCAAGGAAGGTATTTGGCTTAAATACATGGTGTGGCATTTTCAAA  750

seq1  CTGGAACATACAGTTTATGCTGTCTAAATTGGGCAATATTTTCAGGCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACATACAGTTTATGCTGTCTAAATTGGGCAATATTTTCAGGCAGC  800

seq1  AAGGGGCTGAGAATTC  816
      ||||||||||||||||
seq2  AAGGGGCTGAGAATTC  816

seq1: chr13_32005330_32006487
seq2: B6Ng01-324C23.g_66_1219

seq1  GAATTCTCTAATCAATCCTATTTTTAACAGTGAGGAAACAGAAGCATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATCAATCCTATTTTTAACAGTGAGGAAACAGAAGCATTGA  50

seq1  GAAATTAAGTAAGGAACTTGCCTAAGGTTATATATACATCTTATAACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAGTAAGGAACTTGCCTAAGGTTATATATACATCTTATAACTGA  100

seq1  CAGGTACTAAATGGAAACACTCTGACTTAAAGCCCACATTTAAATACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACTAAATGGAAACACTCTGACTTAAAGCCCACATTTAAATACAAT  150

seq1  ACTTTTTCCCAGAAATAAACACACTGGGACTGCAGAGATGGTTCTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCCCAGAAATAAACACACTGGGACTGCAGAGATGGTTCTGTGAT  200

seq1  TAGCAATACTTATGTGATTAGCAATACTTATTCTTCCAAAAGAATCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATACTTATGTGATTAGCAATACTTATTCTTCCAAAAGAATCTGGG  250

seq1  TTTGACTCCTAGGACCCAGGTTGTAGCTCATAAGTGAGTGTAATTCCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCCTAGGACCCAGGTTGTAGCTCATAAGTGAGTGTAATTCCTAT  300

seq1  TCCAGGGGACTCTTCTTTGCCTTCTGACCTTCATGGACATCTTGGGGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGGACTCTTCTTTGCCTTCTGACCTTCATGGACATCTTGGGGTAT  350

seq1  ATGTACATTCAAACTAAACACCCAAATATAAAAAGTAAAAATATTAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATTCAAACTAAACACCCAAATATAAAAAGTAAAAATATTAAAGA  400

seq1  CAGAAATGAGAGTATTGTGTAATAAATCTGTATATTACTAAGTACATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGAGAGTATTGTGTAATAAATCTGTATATTACTAAGTACATGTA  450

seq1  AAGAAATTATACTTAAGGCAGTAATGTTTTATTTTATTTTATTTTACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTATACTTAAGGCAGTAATGTTTTATTTTATTTTATTTTACATG  500

seq1  TCTATGGATGGAAAATGGCGCATTGTACATATAGACAAGGGCTTTACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGATGGAAAATGGCGCATTGTACATATAGACAAGGGCTTTACCAC  550

seq1  TGAGCTATGATTCAGCTTAAAGCAGGAGTCTCAAGTGTCACACAAGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTATGATTCAGCTTAAAGCAGGAGTCTCAAGTGTCACACAAGTCAG  600

seq1  GTTTCAATATTGCCATCACCAAATTCTCTGGAGCTCAGGGGCAACGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAATATTGCCATCACCAAATTCTCTGGAGCTCAGGGGCAACGGGAA  650

seq1  GTGGACAGCTTAATTTATCAGGAAGCAAAACTCCTCAGCACCCAAAGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAGCTTAATTTATCAGGAAGCAAAACTCCTCAGCACCCAAAGGAG  700

seq1  CCATAAAGACTCATAGGTAGAGTATAAAAGATATGGCGCCATTCAGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAGACTCATAGGTAGAGTATAAAAGATATGGCGCCATTCAGCTCT  750

seq1  AATCACAAATTGGAGTCCTTGATACAGAAGAAAAACCTTCTATACCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAATTGGAGTCCTTGATACAGAAGAAAAACCTTCTATACCCTTC  800

seq1  ATGCTAATACAAAAGCAAGGTTT-AAGGTTTCGTAGTATTGCAATCTGTG  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGCTAATACAAAAGCAAGGTTTAAAGGTTTCGTAGTATTGCAATCTGTG  850

seq1  AGGAGAATAACCATTGGCACACGTGGATATATCTGTGTCCTATAGGTTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATAACCATTGGCACACGTGGATATATCTGTGTCCTATAGGTTCA  900

seq1  TCAGGGGCCTCTTAGGTTAATATCTACCTTTGCTGAGGAAAATGCCTTGT  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCA-GGGCCTCTTAGGTTAATATCTACCTTTGCTGAGGAAAATGCCTTGT  949

seq1  CAGATCAGACCACAGCTAATTTAGAAAAACAACAACATAAAACTCTTATT  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGATCAGACCACAGCTAATTTAGAAAAACAACAACATAAAACTC-TATT  998

seq1  TTATGTTTGTCTTGCTCTAAG-ATATCATTGTTCTAATATATGATGTGTA  1048
      ||||||||||| ||||||||| |||||||   ||||||||||||||||||
seq2  TTATGTTTGTC-TGCTCTAAGAATATCAT--GTCTAATATATGATGTGTA  1045

seq1  TGTATGTCCTTATTACGTCTTGTTTTAAATTTTTTCTTGATGTTATTTTT  1098
      |||||||||||||||||||||| |||||||||||   |||||||| ||||
seq2  TGTATGTCCTTATTACGTCTTGGTTTAAATTTTT--CTGATGTTA-TTTT  1092

seq1  TTCTTTGATCATTCTAGAACCAA-TTCCATAG-AAGATATA--GTTTATG  1144
      |||||||||||||| |||| ||| |||||||| ||||||||   ||||||
seq2  TTCTTTGATCATTC-AGAAACAATTTCCATAGAAAGATATAAGTTTTATG  1141

seq1  CTTTTAAAAATAGA  1158
        ||| ||||||||
seq2  GCTTT-AAAATAGA  1154