BAC Information

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BAC

Clone NameB6Ng01-324G02
Chromosome13 (Build37)
Map Location 66,404,292 - 66,404,894
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974
Downstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324G02.bB6Ng01-324G02.g
ACCGA112709GA112710
length1,0531,113
definitionB6Ng01-324G02.b B6Ng01-324G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtaatacaatcactattccacaatttgcaaaactccttcaaa
cttttgctagtataagcaggacccactatcacttttcagttgtaagaaga
gttctagaaagaaaatagagtataataaatgactgatgagacccaggagt
gttttagccctgaagccaagaagaaacaatcatattagaaaaagtattaa
ccattacatgaacatatttgaaatgtccaatttctgactgttctaattta
acccttgagaattaattccacaagaagagggcagtggtgtgaaagaacaa
gaagtgaagaagttcatgagatttttgagtggcctggaaagtattggtgg
tgaggaggcaagcacatcaactggagcattagtggatgttaaggtacctg
ccagataagaatgaacatactgagttaggaaaacctgaggtcattgtctt
acagacacctgaagctagataaatcattatggaataacattagtagtggg
gttgggtttaagtgttacagtttctaaaacaacagcttgagtacaatatg
cagaactagctaaaatattcagtggctgagaaacagataataaaaccaga
ttggttacctgggcagtggtagtgcacgttggtaatcctagcactcaaga
ggcagaggaagggggatctctgagttccaggccagcctagtctacagaat
gagacccaggactgccagagctacacagagagacttgtctcaaaaaaaaa
aaaatctggctgaatgggctggagagatggctcagcggttaagagtaccg
actggtcttccagaggccctttagttcatttcccagcaaccacatggtgg
ttcacaaccatctgtaatgggcatctgatgctctcttctgctgtgtctga
agatagtgacagtgtactcacactatatgaaaataaatatggctggagca
gtagagctgaaaaaattttttttaaatctggctgactacagttgggactg
ttgagctatacacaagggtgatatcaatcttttttgatggaggatatgaa
att
gaattcaaggtaaatctactgagcaagttccaggacagccaagcttaggc
agtgtgaagttgttgaaaatttgaaagctggtgatcatgtactagaaagg
ccatggttcagccccagaaaatagctttgtccctgtggctctggctttag
aggcaagcgtagaagggactacttagacaattgatgttggttagctgtag
ataaaaaattaggggtgatgaagaagaaaccagcatcactgaagtggaac
cttctggtaagtgttttctggaaggacaaagatgctatgctgtgttccag
agttacccaaagttgtaccttgtgatgcttctggacttggtcatgtgtga
gaactacccaggtggtgttagtttcaaggcatgaaggggtcatgtagagc
agctaagacatggcaaaatgaagagagtatttgagaggaaagcagtgaac
ccctgttacagcaggaaaacccagcatattgaaggtgtaagtcccatgag
atgagcagaaagaatagcaacagcagtagagtgaagtcaaccagaaccta
gggtgctatagagaaaagagctggagaagtcacccactttcttttgagga
gtgcaaaagatcatgtgtagatcccagccagtggaatatgaagatgtaat
attgtagttaccttggagaccccaagattttgagatgctagagctatggg
ataagtgctcaggaaaactgctttcctgaaataagtccagccaaagagaa
agaattgtgctggagtgaaataagcagaaagggtttgaagaacacttgaa
atcagacacggatatgcagaatttggagattgaccttcttttgggtccag
tatttcctcacaatgctatttaaggaatagaaaagtagctgggcagtggt
ggtatgcgatttaatcccagcccatgggaggcaaagacaggtggatttct
gagttcgaaggccagcctggtttacagagttagtcccatgacagcccaag
cctactcagtgaaaagggaagtatattcctgtcattttggagtatgtaat
ggctatttgctttttgtcaactatcacgcgccaatactacgtttacgtgt
gaattgggcattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66404292_66404894
seq2: B6Ng01-324G02.b_500_1100

seq1  AGACACCTGAAGCTAGATAAATCATTATGGAATAACATTAGTAGTGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTGAAGCTAGATAAATCATTATGGAATAACATTAGTAGTGGGGT  50

seq1  TGGGTTTAAGTGTTACAGTTTCTAAAACAACAGCTTGAGTACAATATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTAAGTGTTACAGTTTCTAAAACAACAGCTTGAGTACAATATGCA  100

seq1  GAACTAGCTAAAATATTCAGTGGCTGAGAAACAGATAATAAAACCAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGCTAAAATATTCAGTGGCTGAGAAACAGATAATAAAACCAGATT  150

seq1  GGTTACCTGGGCAGTGGTAGTGCACGTTGGTAATCCTAGCACTCAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACCTGGGCAGTGGTAGTGCACGTTGGTAATCCTAGCACTCAAGAGG  200

seq1  CAGAGGAAGGGGGATCTCTGAGTTCCAGGCCAGCCTAGTCTACAGAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAGGGGGATCTCTGAGTTCCAGGCCAGCCTAGTCTACAGAATGA  250

seq1  GACCCAGGACTGCCAGAGCTACACAGAGAGACTTGTCTCAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGACTGCCAGAGCTACACAGAGAGACTTGTCTCAAAAAAAAAAA  300

seq1  AATCTGGCTGAATGGGCTGGAGAGATGGCTCAGCGGTTAAGAGTACCGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGCTGAATGGGCTGGAGAGATGGCTCAGCGGTTAAGAGTACCGAC  350

seq1  TGGTCTTCCAGAGGCCC-TTAGTTCAATTCCCAGCAACCACATGGTGGTT  399
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  TGGTCTTCCAGAGGCCCTTTAGTTCATTTCCCAGCAACCACATGGTGGTT  400

seq1  CACAACCATCTGTAATGGGCATCTGATGCTCTCTTCTGCTGTGTCTGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCATCTGTAATGGGCATCTGATGCTCTCTTCTGCTGTGTCTGAAG  450

seq1  ATAGTGACAGTGTACTCACACTATATG-AAATAAATATGGCTGGAGCAAG  498
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  ATAGTGACAGTGTACTCACACTATATGAAAATAAATATGGCTGGAGC-AG  499

seq1  TAGAGCTGAAAAAAATTTTTTTTTAAATCTGGCTGACTACAGTTGGAACT  548
      ||||||||||||||  |||||||||||||||||||||||||||||| |||
seq2  TAGAGCTGAAAAAA--TTTTTTTTAAATCTGGCTGACTACAGTTGGGACT  547

seq1  GTTGAGCTATACAACCAGGGGTGAATACAATC-TTTTTGATGGAGGATAT  597
      |||||||||||||  || ||||||   ||||| |||||||||||||||||
seq2  GTTGAGCTATACA--CAAGGGTGATATCAATCTTTTTTGATGGAGGATAT  595

seq1  GAAATT  603
      ||||||
seq2  GAAATT  601