BAC Information

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BAC

Clone NameB6Ng01-326K13
Chromosome13 (Build37)
Map Location 66,835,284 - 66,836,447
singlet/doubletsinglet
Overlap geneLOC666027
Upstream geneLOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106
Downstream geneLOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326K13.bB6Ng01-326K13.g
ACCGA114413GA114414
length1,1551,161
definitionB6Ng01-326K13.b B6Ng01-326K13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccctgtggctgagctcgggggatatcagcagcagagcaagcag
gccgctgtgctgttgaaagacctctgaagggagcccctcattcaactctc
cggataatagcagagctccaaggactcacgagagaccaaacttgatgcaa
accacacgaggctttattcggggaaagccagagctctggggacaacttgt
atcccacacaggggtagaggagtccactccaaggggaaaggggttccggt
ttttataggccctcaggggagaaaggagaaggagggaataggggatttct
gatctaaacaatatctattctcaaaaaatggatatggtaggggtacaagg
aaagagtttggtgcaggtgcagcaactccggattggcaccggctatggtt
gctggggagattttccaactctatcccagcaaccaatatcacaaatacct
ggcagtgaggtgcagcagtgggtcacacctgggttcaaggaacggtcaca
acattggcagacacacaggttcgaggtgtggccagagcattgtgcacctc
tatttttctaaatcaatggaggtacttctaataaaaatgaaatctgtttt
gccaatttcaggtcttttgtgaccttttacaatctgtcagaatcttttac
tgccttttcatgtttttcagggggtcctgtggactggctcctctttaaat
gcacacagcaagccctttatattcacaatgttatgtgaatttattttctg
agtcagattcctcctctgaggttggtttctattcttgaatcgccagggtc
ctgtcctgagccacttttctcaggtttttctgtggagaaataaacatgtt
tctcaaccctgacagagttgtggcagcacatgggagtcccctcagtcctg
ggcacctgtggcttctctgtcccctgcctgtgccttcctcagcaagttcc
acacagcagaggctgtaaggggcaagtctgggcctccattctctgtgaac
agggtttaatatttcacctgctctctctcacatgtccacatcgaacattc
tgacgaggacagtacagtcccacctcagtggctattactttagatctgct
cataatgttcgtgaggaactctgtcctgcagactcactgggtgccaatcc
tgcaa
gaattcaaggtaaatctactgagcaagttccaggacagccaagcttaggc
agtgtgaagttgttgaaaatttgaaagctggtgatcatgtaatagaaagg
ccatggtccagccccagcaagtagctttgtccctgtggctctggctttag
aggcaagcatagaagggactacttagacaatttatgttggttagctgtag
ataaaaaattaggggtgatgaagaagaaaccagcatcactgaagtggaac
cttctggtaagtgttttctggaaggacaaagatgctgtgttccagagatg
cccaaagttgtaccttgtgatgcttctggacttggtcatgtgtgagaact
acccaggtagtcttagtttcgaggcatgaaggggtcatgtagaccagcta
agacatggcacaatgaagagtatttgagaggaaagcagtgcagccctgtt
ccagcaggaaaacccagcatattgaaggtgtcagtcccataagatgagca
gaaagaacagcaacagcagtagagtgaagtcaaccagaacctagggtgct
atagagaaaaaagctggagaagtcacccactttcttttgaggagtgcaaa
agatcatgtatagatcccagccagtggaacatgaagatgtaatattgtag
ttaccttggagaccccatgattttgagatgttagagctatgggataaggg
ctcaggaaaactgctttcctgaaaaaagtccagccaaagagaaagaattg
tgctggagtgaaataagcagaaagggtttgaagaacacttgaaatcagac
atggatatgcagagtttggagactgaccttctttggtccagtatttcctc
acaatgctattcagaaatagaaaagtttctgggcagtggtggtatgcgat
ttaatcccagcacatgggaggcaagacaggtggatttctgagttcgagac
cagcctggtttacagagttagtttcacgacagccacggctacacagggaa
aaggtgtatatcctgtcaatttgaggtatgtatgtgctatttgttttgta
atatagggattttagtagcctgaatgatgaatctcagatgaatgaaattg
aactatatgtgggaactgtcataatggatggagttcgttgcaaggtgaaa
cttctcaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66835284_66836447
seq2: B6Ng01-326K13.b_50_1204

seq1  GAATTCACCCTGTGGCTGAGCTCGGGGGATATCAGCAGCAGAGCAAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTGTGGCTGAGCTCGGGGGATATCAGCAGCAGAGCAAGCAG  50

seq1  GCCGCTGTGCTGTTGAAAGACCTCTGAAGGGAGCCCCTCATTCAACTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTGTGCTGTTGAAAGACCTCTGAAGGGAGCCCCTCATTCAACTCTC  100

seq1  CGGATAATAGCAGAGCTCCAAGGACTCACGAGAGACCAAACTTGATGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATAATAGCAGAGCTCCAAGGACTCACGAGAGACCAAACTTGATGCAA  150

seq1  ACCACACGAGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACAACTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACGAGGCTTTATTCGGGGAAAGCCAGAGCTCTGGGGACAACTTGT  200

seq1  ATCCCACACAGGGGTAGAGGAGTCCACTCCAAGGGGAAAGGGGTTCCGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACACAGGGGTAGAGGAGTCCACTCCAAGGGGAAAGGGGTTCCGGT  250

seq1  TTTTATAGGCCCTCAGGGGAGAAAGGAGAAGGAGGGAATAGGGGATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGGCCCTCAGGGGAGAAAGGAGAAGGAGGGAATAGGGGATTTCT  300

seq1  GATCTAAACAATATCTATTCTCAAAAAATGGATATGGTAGGGGTACAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAAACAATATCTATTCTCAAAAAATGGATATGGTAGGGGTACAAGG  350

seq1  AAAGAGTTTGGTGCAGGTGCAGCAACTCCGGATTGGCACCGGCTATGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTTGGTGCAGGTGCAGCAACTCCGGATTGGCACCGGCTATGGTT  400

seq1  GCTGGGGAGATTTTCCAACTCTATCCCAGCAACCAATATCACAAATACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAGATTTTCCAACTCTATCCCAGCAACCAATATCACAAATACCT  450

seq1  GGCAGTGAGGTGCAGCAGTGGGTCACACCTGGGTTCAAGGAACGGTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGAGGTGCAGCAGTGGGTCACACCTGGGTTCAAGGAACGGTCACA  500

seq1  ACATTGGCAGACACACAGGTTCGAGGTGTGGCCAGAGCATTGTGCACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGCAGACACACAGGTTCGAGGTGTGGCCAGAGCATTGTGCACCTC  550

seq1  TATTTTTCTAAATCAATGGAGGTACTTCTAATAAAAATGAAATCTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTAAATCAATGGAGGTACTTCTAATAAAAATGAAATCTGTTTT  600

seq1  GCCAATTTCAGGTCTTTTGTGACCTTTTACAATCTGTCAGAATCTTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTTCAGGTCTTTTGTGACCTTTTACAATCTGTCAGAATCTTTTAC  650

seq1  TGCCTTTTCATGTTTTTCAGGGGGTCCTGTGGACTGGCTCCTCTTTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTCATGTTTTTCAGGGGGTCCTGTGGACTGGCTCCTCTTTAAAT  700

seq1  GCACACAGCAAGCCCTTTATATTCACAATGTTATGTGAATTTATTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGCAAGCCCTTTATATTCACAATGTTATGTGAATTTATTTTCTG  750

seq1  AGTCAGATTCCTCCTCTGAGGTTGGTTTCTATTCTTGAATCGCCAGGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGATTCCTCCTCTGAGGTTGGTTTCTATTCTTGAATCGCCAGGGTC  800

seq1  CTGTCCTGAGCCACTTTTCTCAGGTTTTTCTGTGGAGAAATAAACATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGAGCCACTTTTCTCAGGTTTTTCTGTGGAGAAATAAACATGTT  850

seq1  TCTCAACCCTGACAGAGGTTGTGGCAGCACATGGGAGTCCCCTCAGTCCT  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTCAACCCTGACAGA-GTTGTGGCAGCACATGGGAGTCCCCTCAGTCCT  899

seq1  GGGCACCTGTGGCTTCTCTGTCCCCTGCCTGTGCCTTCCTCAGCAAGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCTGTGGCTTCTCTGTCCCCTGCCTGTGCCTTCCTCAGCAAGTTC  949

seq1  CACACAGCAGAGGCTGTAAGGGGGCAGGTCTGGGCCTCCATTCTCTGTGA  1000
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  CACACAGCAGAGGCTGTAA-GGGGCAAGTCTGGGCCTCCATTCTCTGTGA  998

seq1  ACAGGGTTTTAATATTTCACCCTGCTCTCTCTCACATGTCCACATCGAAC  1050
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  ACAGGG-TTTAATATTTCA-CCTGCTCTCTCTCACATGTCCACATCGAAC  1046

seq1  ATTCTGACAGAAGACAGTTACCAGTTCCCACCTCAGTGCCTATTACTTTA  1100
      |||||||| || ||||||   ||| ||||||||||||| |||||||||||
seq2  ATTCTGAC-GAGGACAGT--ACAG-TCCCACCTCAGTGGCTATTACTTTA  1092

seq1  AGAATCTGCTCCATAATGTTCGTGAGGAACTCTGT-CTGCAGACTCACTG  1149
         ||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  --GATCTGCT-CATAATGTTCGTGAGGAACTCTGTCCTGCAGACTCACTG  1139

seq1  TGTGCC-ATCCTGCAA  1164
       ||||| |||||||||
seq2  GGTGCCAATCCTGCAA  1155