BAC Information

Click to search

BAC

Clone NameB6Ng01-329B06
Chromosome13 (Build37)
Map Location 28,031,115 - 28,031,550
singlet/doubletsinglet
Overlap genenone
Upstream genePrl, Prl3d1, Prl3d2, Prl3d3, Prl3c1, Prl3b1, Prl3a1, Prl6a1, Prl8a2, Prl2b1, Prl8a6, Prl8a8, Prl8a9, Prl8a1, Prl7b1, Prl7a1, Prl7a2, RP23-135A24.2-001, Prl7d1, Prl7c1, Prl2a1, OTTMUSG00000000651, LOC666321, LOC195243
Downstream geneLOC100041036, Prl4a1, Prl5a1, LOC100042388, LOC100042393, LOC100042399, Ppia-ps13_297.1, LOC626683, 2610307P16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329B06.bB6Ng01-329B06.g
ACCGA116156GA116157
length4301,200
definitionB6Ng01-329B06.b B6Ng01-329B06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaaagggaatgatcgtaagtctcaaaactaaagtggaccaagagacatct
taggtggtatgacttctgttaagttaataggagttttctggggacataag
agaccttagatattgaactaagtgtgaatcctttgataatttatgcaggc
aatataatagactataataagtgcaagtatgagtcatttccatacatgat
ttacagggattgcagcccaggcataacatggtacttcctatttcctccaa
tttgaatctgaagatgatcaccagaagagtcagccaaatagttgatatat
tttagtaatattcatgcatagtcattttaaatgttgaaggtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgaaagacaaagtgtgtgcgtgtaaa
gattttggaaaattgggatttactatacac
gaattccataaaaacaaaaaactggacatcaaattacatgtacaaagaac
atgtatgattagaaagattctctgacaccattatgggacaaagaatgtcc
aaagatgccattgagcttgttttgagtagaccttctactatgtggaatgg
aacatttaccaaaaagtgatttgataacccagcgagacaccctgggagaa
aactaaattgtcatttgctggtggctatcgatgggagataggttctaagt
tatagatggacccaggtatctacttctcttttctgctctaggatcccatc
tgatgcaaacatgttcagaccctgtgcatgttgccacagtctctggagtt
catatgtatgctatcactgtagtgtgagaagatgttgattccttggtttt
ctccatcatctttggctcttatactttttccacagagtttctagaccccc
gtggggaaggattttatacagacacctcttttaggtccaaaggttatacg
ttctctcattctttacatttgtctggctaagaatcactctatctgttccc
atctgaggcagaagagttctctgatgatggttgagaaaggcattgatcta
tgagttgaacagaatgtccttagtagctattccactactactttttttcc
atcaaagcactagtaattggttttcctcttagttcctagtctatccagcc
ttgggttcttgtccacccaaactgtactaggtatgggttctatcttacag
aatgggtcttacctcaatcagatattggttggttactccaacaggcttta
tgccatccttgtagaggcatatcttggtgataggtcagcattgtagatca
aatgatttgtagctgatttggtatttacctttctcctctctctccatgta
cagtgaaacatagtccatatgcctaaaggttctaggtaggccaccatatc
aacttatcagtgttcaatgagtgtgaagtgttgttcttcagcatagggcc
ttaccatcaattgtgagagccaacaatagctttgtttgcagcctccatag
attactttgggccaacaatttcgttataatgtaaacatttcccggtaact
agaaaattattttgtggacacgagaatgttccaaggaactctggttctca
ccgttattttagaaagttccatttgaatgcacataatgtgctggttgatg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_28031115_28031550
seq2: B6Ng01-329B06.b_45_480 (reverse)

seq1  GTGTTTAGTAAATCCCACTTTTCCCAAATCTTTACACGCACACACTTTCT  50
      |||| |||||||||||| |||||| ||||||||||||||||||||||| |
seq2  GTGTATAGTAAATCCCAATTTTCCAAAATCTTTACACGCACACACTTTGT  50

seq1  CTTTCACAAACACACACACACACACACACACACACACACACCTTCAACAT  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACACACACACACACACACACACACACACACACACACCTTCAACAT  100

seq1  TTAAAATGACTATGCATGAATATTACTAAAATATATCAACTATTTGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGACTATGCATGAATATTACTAAAATATATCAACTATTTGGCTG  150

seq1  ACTCTTCTGGTGATCATCTTCAGATTCAAATTGGAGGAAATAGGAAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGGTGATCATCTTCAGATTCAAATTGGAGGAAATAGGAAGTAC  200

seq1  CATGTTATGCCTGGGCTGCAATCCCTGTAAATCATGTATGGAAATGACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATGCCTGGGCTGCAATCCCTGTAAATCATGTATGGAAATGACTC  250

seq1  ATACTTGCACTTATTATAGTCTATTATATTGCCTGCATAAATTATCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGCACTTATTATAGTCTATTATATTGCCTGCATAAATTATCAAAG  300

seq1  GATTCACACTTAGTTCAATATCTAAGGTCTCTTATGTCCCCAGAAAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACACTTAGTTCAATATCTAAGGTCTCTTATGTCCCCAGAAAACTC  350

seq1  CTATTAACTTAACAGAAGTCATACCACCTAAGATGTCTCTTGGTCCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAACTTAACAGAAGTCATACCACCTAAGATGTCTCTTGGTCCACTT  400

seq1  TAGTTTTGAGACTTACGATCATTCCCTTTTGAATTC  436
      ||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGAGACTTACGATCATTCCCTTTTGAATTC  436