BAC Information

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BAC

Clone NameB6Ng01-329P11
Chromosome13 (Build37)
Map Location 84,928,118 - 84,929,257
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC432789, 2810049E08Rik, LOC100043119, LOC667081, LOC667101, Tmem161b, LOC666795, LOC667111, LOC382786
Downstream geneLOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329P11.bB6Ng01-329P11.g
ACCGA116776GA116777
length1,1431,174
definitionB6Ng01-329P11.b B6Ng01-329P11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcattccccttatagaggaaaatgaagaattaccatgtttgtg
gtgttcttcaccttatgttcagcaaaatctttgttatttaaatatcagat
acaagataataagcaatgaaagggattttatttgacttgtaaatttgaag
gtctaagagcgttacctcgactctagcattaggcttcccatcataacatg
ttagagcagcggaataaatggctgactgcagaatctagctttgctttgca
ccaaactgctctttcaagaattaatttcctccttgatactaccattaaca
ccaaactgaacaatgtttctttgtccagctacctcccactgagacccaca
tcttaaatgttcaattgtctttcaatattgtcactgcagggatcaacttt
ctatacagaaacgttggggggacatactcaaactctattgaaacatacaa
agatattttcaaaggagggcaatgtgtatgcttcctccagacttcataat
tctcagggttgaaaggagaattgtagtttctagtggcacttagaagtctg
aatttgacctacaggtatatgaacttgtcaagatatagttcatgactttg
aactgcaacaatcttcagggatcaaaggaggctgagattctccatctcta
gatctttaaacttttctctaaacactcttcatcttactctgatgaaagtc
tgactcttcctgataggaatgccatctgccagtttcctttagtagtctct
gggcttttgtttgtttgtttcttcctctacaaccttcatgtttctggaac
tgggataggtagctgtcctgatcttctattgcccctacacatgaccctac
ctgccataatcaccgtgttactagacccactagacactttttattcctat
tattaacagttaacaacatgttgttcaccttgatcttcatcttattccca
gtacacagccatctcctgatttttccttcatgtcagtgattgtctttttt
ttatatttctgctgggttcctcaacaagccagcaactaaatggcacccca
cagatcagcttctatattttattaagttccatcaggtttatctttttcta
gtccatgccttgggaggtgctatcttaacatggttgattttcc

gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggcggcacacatgcgattgctcgcagcacgtact
ggctctccacagtcccgaggtgaaaagttcactgaaacagtatcctggaa
ccgcggcatcctgtataacgaatactccaatgtctttgctttggttggta
aatggacctgtgtgctttcccttaatattgccttattataagtgcttcta
aggattgaatttttgacatatagctaagttagattctaggcagtccttga
gccaaccctgggcataaatagctaagtcactgccctatgcaggaatttac
cactatctaggaagaaagaagtttgtgatctaaggaggaaccagagtaga
tacttagaactatagatagatgagttacacccatacacaagtatttacaa
tggcctagggtgaaggtagactaactatacaatagactagaataggaact
acggcaagggcacgaagtccttgcccctggcttctaagattaagatgacc
ttaggtggggctgctttttgctcccagctgttaacattgaattttatcca
agttggttcctgccagtccttccatgtttgcattcctctgttttatttaa
gaatccagtaacctcattgtaccttgccggtgtctcacctaactttctta
ttttcttctgtataaaaagtttgatgctagatttgacaaattacattcag
atccactctcccttgtgttgagtctgtttgtcactcctcactttcaccta
ctcttttgcccacctacaaccagaacccgttccgtgcagataggacaccc
agaaagggtaagtctgtggcagtttcaatgtaacttttggctttaaatta
tttgcaatgataatcctagatgcgaatgtatactagttgttgatctaaaa
cctggccatgattaacgttgagttctgacctctttctatggtattcagga
tcatatcaacatatgtagttagattgagcctggtgtgtgtacatggacaa
cttacaaagaatggctcatgtaattctccaatttccaatctttcaatcca
ttttctaatcaacccatataggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84928118_84929257
seq2: B6Ng01-329P11.b_49_1191

seq1  GAATTCTTCATTCCCCTTATAGAGGAAAATGAAGAATTACCATGTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTCCCCTTATAGAGGAAAATGAAGAATTACCATGTTTGTG  50

seq1  GTGTTCTTCACCTTATGTTCAGCAAAATCTTTGTTATTTAAATATCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTCACCTTATGTTCAGCAAAATCTTTGTTATTTAAATATCAGAT  100

seq1  ACAAGATAATAAGCAATGAAAGGGATTTTATTTGACTTGTAAATTTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATAATAAGCAATGAAAGGGATTTTATTTGACTTGTAAATTTGAAG  150

seq1  GTCTAAGAGCGTTACCTCGACTCTAGCATTAGGCTTCCCATCATAACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGAGCGTTACCTCGACTCTAGCATTAGGCTTCCCATCATAACATG  200

seq1  TTAGAGCAGCGGAATAAATGGCTGACTGCAGAATCTAGCTTTGCTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCAGCGGAATAAATGGCTGACTGCAGAATCTAGCTTTGCTTTGCA  250

seq1  CCAAACTGCTCTTTCAAGAATTAATTTCCTCCTTGATACTACCATTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGCTCTTTCAAGAATTAATTTCCTCCTTGATACTACCATTAACA  300

seq1  CCAAACTGAACAATGTTTCTTTGTCCAGCTACCTCCCACTGAGACCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGAACAATGTTTCTTTGTCCAGCTACCTCCCACTGAGACCCACA  350

seq1  TCTTAAATGTTCAATTGTCTTTCAATATTGTCACTGCAGGGATCAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAATGTTCAATTGTCTTTCAATATTGTCACTGCAGGGATCAACTTT  400

seq1  CTATACAGAAACGTTGGGGGGACATACTCAAACTCTATTGAAACATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGAAACGTTGGGGGGACATACTCAAACTCTATTGAAACATACAA  450

seq1  AGATATTTTCAAAGGAGGGCAATGTGTATGCTTCCTCCAGACTTCATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTCAAAGGAGGGCAATGTGTATGCTTCCTCCAGACTTCATAAT  500

seq1  TCTCAGGGTTGAAAGGAGAATTGTAGTTTCTAGTGGCACTTAGAAGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTTGAAAGGAGAATTGTAGTTTCTAGTGGCACTTAGAAGTCTG  550

seq1  AATTTGACCTACAGGTATATGAACTTGTCAAGATATAGTTCATGACTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGACCTACAGGTATATGAACTTGTCAAGATATAGTTCATGACTTTG  600

seq1  AACTGCAACAATCTTCAGGGATCAAAGGAGGCTGAGATTCTCCATCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAACAATCTTCAGGGATCAAAGGAGGCTGAGATTCTCCATCTCTA  650

seq1  GATCTTTAAACTTTTCTCTAAACACTCTTCATCTTACTCTGATGAAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTAAACTTTTCTCTAAACACTCTTCATCTTACTCTGATGAAAGTC  700

seq1  TGACTCTTCCTGATAGGAATGCCATCTGCCAGTTTCCTTTAGTAGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTCCTGATAGGAATGCCATCTGCCAGTTTCCTTTAGTAGTCTCT  750

seq1  GGGCTTTTGTTTGTTTGTTTCTTCCTCTACAACCTTCATGTTTCTGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTTGTTTGTTTGTTTCTTCCTCTACAACCTTCATGTTTCTGGAAC  800

seq1  TGGGATAGGTAGCTGTCCTGATCTTCTATTGCCCCTACACATGACCCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAGGTAGCTGTCCTGATCTTCTATTGCCCCTACACATGACCCTAC  850

seq1  CTGCCATAATCACCGTGTTACTAGACCCACTAGACACTTTTTATTCCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATAATCACCGTGTTACTAGACCCACTAGACACTTTTTATTCCTAT  900

seq1  TATTAACAGTTAACAACATGTTGTTCACCTTGATCTTCATCTTATTCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACAGTTAACAACATGTTGTTCACCTTGATCTTCATCTTATTCCCA  950

seq1  GTACACAGCCATCTCCTGATTTTTCCTTCATGTCAGTGATTGTTCTTTTT  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTACACAGCCATCTCCTGATTTTTCCTTCATGTCAGTGATTG-TCTTTTT  999

seq1  TTTATATTTTCTGCT-GGTTCCTCAACAAGCCCAGCAAACTAAATGGCA-  1048
      |||||| |||||||| |||||||||||||| ||||| |||||||||||| 
seq2  TTTATA-TTTCTGCTGGGTTCCTCAACAAG-CCAGC-AACTAAATGGCAC  1046

seq1  CCCACAGATCAGCTTCTATATTTTATTTAAGTCCATCAGGTTTATC-TTT  1097
      ||||||||||||||||||||||||||| |  ||||||||||||||| |||
seq2  CCCACAGATCAGCTTCTATATTTTATTAAGTTCCATCAGGTTTATCTTTT  1096

seq1  TCTAGTCCCATGCTTTGG--AGTGCTATCT--ACAT-GTTGATTTTCC  1140
      |||||| |||||| ||||   |||||||||  |||| |||||||||||
seq2  TCTAGT-CCATGCCTTGGGAGGTGCTATCTTAACATGGTTGATTTTCC  1143


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