BAC Information

Click to search

BAC

Clone NameB6Ng01-330A23
Chromosome13 (Build37)
Map Location 19,671,695 - 19,672,237
singlet/doubletsinglet
Overlap genenone
Upstream geneVps41, Amph, LOC624044, Tcrg-V4, LOC624071, Tcrg, Tcrg-C, Stard3nl
Downstream geneEpdr1, Sfrp4, Txndc3, A530099J19Rik, Gpr141, LOC432730, Elmo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330A23.bB6Ng01-330A23.g
ACCGA116842GA116843
length827537
definitionB6Ng01-330A23.b B6Ng01-330A23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggaagtctttaacttctttctttctttcttccctggccaaat
tacaatggagtaaagagttgttcaatttccattggtgtttgggttttttg
ttttgtttcatttttcttgttattaagtctagccttagtctgtggtgatc
tgataggatgcatggaattattgcaaactttttttcattagttgaggttt
gttttgtgaccaattatatagttttagagaaggtaccatgaggtgttgag
aggaaggtatattcttttgatttagggttaaatgttctgtatacatctct
tcaatccatttggttcataacctctcttagtttcacggtgtctctgttta
gtttctgtttcaatgacctgtccattagtgaaagtggggtgttgaagtct
ttcactattattgtgtgagatttgatgtgtgttttgagctttagtaaatg
aatgtgggtgcccttgagtttggggcatagatgttcaaaattgattcttt
ctcttggtggatttttcctttgatggatatgaagtgtccttctccgtctt
atttgataacttgcaggttaaagtctattttagtggatattagaatggca
actgccacttgtttcttgggaccatttgcttagaacacttttttctagcc
ttttactttgggttgtatctgtcttttttattctggtgtgtttcttgtat
gcagcaaaatgctggatcctgcttgcatatccagtcttttttattgctta
tatctttttattgggggaattttagttcattgatattgaaaagatattaa
agacagatcattttttaagtttttgtt
accctatgtactagggcttggttgaaagagaaagtcctctaaaaagtaca
gtaatgactttcctctgcatagcaatccgtacacatctgcctgcctttgg
agatgagcatgagaactgtgctttcagggagagtcatgaaatgttcaaga
atgtggaataatttcagtaagaaggagaggggactcagggcgcaaaggca
ggaaaagacaaggccaaaggccaaaggctatcactagccaagccagatca
gatgggagaacctcaaggaggagtcaggaatagtggtgagataaagggtc
aggacaaaccagaaggcattgtctgcagatgcacactgtcaccaggtggt
tttgggtttctgggcttagcttgtttctaatagaaggctgggtgtctaaa
ggaactatcccagagatctagcagaacctccatcagggtagcagaatcgt
gtatcactctaggttctggctaattcaccagagatatccaagattttctg
gaagatttgaaaagatatgagagagatgggggagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_19671695_19672237
seq2: B6Ng01-330A23.g_67_609

seq1  GAATTCACCCTATGTACTAGGGCTTGGTTGAAAGAGAAAGTCCTCTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTATGTACTAGGGCTTGGTTGAAAGAGAAAGTCCTCTAAAA  50

seq1  AGTACAGTAATGACTTTCCTCTGCATAGCAATCCGTACACATCTGCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGTAATGACTTTCCTCTGCATAGCAATCCGTACACATCTGCCTGC  100

seq1  CTTTGGAGATGAGCATGAGAACTGTGCTTTCAGGGAGAGTCATGAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGATGAGCATGAGAACTGTGCTTTCAGGGAGAGTCATGAAATGT  150

seq1  TCAAGAATGTGGAATAATTTCAGTAAGAAGGAGAGGGGACTCAGGGCGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATGTGGAATAATTTCAGTAAGAAGGAGAGGGGACTCAGGGCGCA  200

seq1  AAGGCAGGAAAAGACAAGGCCAAAGGCCAAAGGCTATCACTAGCCAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGAAAAGACAAGGCCAAAGGCCAAAGGCTATCACTAGCCAAGCC  250

seq1  AGATCAGATGGGAGAACCTCAAGGAGGAGTCAGGAATAGTGGTGAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGATGGGAGAACCTCAAGGAGGAGTCAGGAATAGTGGTGAGATAA  300

seq1  AGGGTCAGGACAAACCAGAAGGCATTGTCTGCAGATGCACACTGTCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAGGACAAACCAGAAGGCATTGTCTGCAGATGCACACTGTCACCA  350

seq1  GGTGGTTTTGGGTTTCTGGGCTTAGCTTGTTTCTAATAGAAGGCTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTTTGGGTTTCTGGGCTTAGCTTGTTTCTAATAGAAGGCTGGGTG  400

seq1  TCTAAAGGAACTATCCCAGAGATCTAGCAGAACCTCCATCAGGGTAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGGAACTATCCCAGAGATCTAGCAGAACCTCCATCAGGGTAGCAG  450

seq1  AATCGTGTATCACTCTAGGTTCTGGCTAATTCACCAGAGATATCCAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTGTATCACTCTAGGTTCTGGCTAATTCACCAGAGATATCCAAGAT  500

seq1  TTTCTGGAAGATTTGAAAAGATATGAGAGAGATGGGGGAGGGG  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAAGATTTGAAAAGATATGAGAGAGATGGGGGAGGGG  543